RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 TOX3O15405 576 aaPredicted RBP12.92□□□□□ -0.34
RNF4-215ENST00000511843 CD3EAPO15446 510 aaKnown RBP12.92□□□□□ -0.34
RNF4-215ENST00000511843 KIF5CO60282 957 aa12.92□□□□□ -0.34
RNF4-215ENST00000511843 C1QL1O75973 258 aa12.92□□□□□ -0.34
RNF4-215ENST00000511843 OR56A5P0C7T3 313 aa12.92□□□□□ -0.34
RNF4-215ENST00000511843 NELFEP18615 380 aaKnown RBP12.92□□□□□ -0.34
RNF4-215ENST00000511843 NDUFS1P28331 727 aa12.92□□□□□ -0.34
RNF4-215ENST00000511843 CCR7P32248 378 aa12.92□□□□□ -0.34
RNF4-215ENST00000511843 NPY2RP49146 381 aa12.92□□□□□ -0.34
RNF4-215ENST00000511843 RHDQ02161 417 aa12.92□□□□□ -0.34
RNF4-215ENST00000511843 LYPLAL1Q5VWZ2 237 aa12.92□□□□□ -0.34
RNF4-215ENST00000511843 ARMC6Q6NXE6 501 aa12.92□□□□□ -0.34
RNF4-215ENST00000511843 LRRC8BQ6P9F7 803 aa12.92□□□□□ -0.34
RNF4-215ENST00000511843 ZNF449Q6P9G9 518 aa12.92□□□□□ -0.34
RNF4-215ENST00000511843 KLHL35Q6PF15 583 aa12.92□□□□□ -0.34
RNF4-215ENST00000511843 RASGRP3Q8IV61 690 aa12.92□□□□□ -0.34
RNF4-215ENST00000511843 VRK3Q8IV63 474 aa12.92□□□□□ -0.34
RNF4-215ENST00000511843 NLGN4XQ8N0W4 816 aa12.92□□□□□ -0.34
RNF4-215ENST00000511843 OTUD6BQ8N6M0 293 aa12.92□□□□□ -0.34
RNF4-215ENST00000511843 SIDT2Q8NBJ9 832 aaKnown RBP12.92□□□□□ -0.34
RNF4-215ENST00000511843 NLGN4YQ8NFZ3 816 aaPredicted RBP12.92□□□□□ -0.34
RNF4-215ENST00000511843 OR52E1Q8NGJ3 308 aa12.92□□□□□ -0.34
RNF4-215ENST00000511843 CPT1BQ92523 772 aa12.92□□□□□ -0.34
RNF4-215ENST00000511843 TFGQ92734 400 aaPredicted RBP12.92□□□□□ -0.34
RNF4-215ENST00000511843 SLC41A2Q96JW4 573 aa12.92□□□□□ -0.34
RNF4-215ENST00000511843 SEMA4CQ9C0C4 833 aa12.92□□□□□ -0.34
RNF4-215ENST00000511843 KLHL25Q9H0H3 589 aa12.92□□□□□ -0.34
RNF4-215ENST00000511843 SRMSQ9H3Y6 488 aa12.92□□□□□ -0.34
RNF4-215ENST00000511843 IL1RAPL1Q9NZN1 696 aa12.92□□□□□ -0.34
RNF4-215ENST00000511843 CIDEBQ9UHD4 219 aa12.92□□□□□ -0.34
RNF4-215ENST00000511843 PLAGL1Q9UM63 463 aa12.92□□□□□ -0.34
RNF4-215ENST00000511843 SNX12Q9UMY4 172 aa12.92□□□□□ -0.34
RNF4-215ENST00000511843 NEU2Q9Y3R4 380 aa12.92□□□□□ -0.34
RNF4-215ENST00000511843 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.91□□□□□ -0.34
RNF4-215ENST00000511843 SLC5A10A0PJK1 596 aa12.91□□□□□ -0.34
RNF4-215ENST00000511843 EIF4E1BA6NMX2 242 aaKnown RBP12.91□□□□□ -0.34
RNF4-215ENST00000511843 ERVH48-1M5A8F1 160 aa12.91□□□□□ -0.34
RNF4-215ENST00000511843 PHF2O75151 1096 aa12.91□□□□□ -0.34
RNF4-215ENST00000511843 KIAA0754O94854 1291 aa12.91□□□□□ -0.34
RNF4-215ENST00000511843 VAPBO95292 243 aa12.91□□□□□ -0.34
RNF4-215ENST00000511843 DLGAP3O95886 979 aa12.91□□□□□ -0.34
RNF4-215ENST00000511843 TPBGLP0DKB5 382 aa12.91□□□□□ -0.34
RNF4-215ENST00000511843 PVRP15151 417 aa12.91□□□□□ -0.34
RNF4-215ENST00000511843 ACADLP28330 430 aa12.91□□□□□ -0.34
RNF4-215ENST00000511843 CD151P48509 253 aa12.91□□□□□ -0.34
RNF4-215ENST00000511843 ARL4DP49703 201 aa12.91□□□□□ -0.34
RNF4-215ENST00000511843 RPA4Q13156 261 aa12.91□□□□□ -0.34
RNF4-215ENST00000511843 TUBB3Q13509 450 aa12.91□□□□□ -0.34
RNF4-215ENST00000511843 GPR19Q15760 415 aa12.91□□□□□ -0.34
RNF4-215ENST00000511843 CYP1B1Q16678 543 aa12.91□□□□□ -0.34
RNF4-215ENST00000511843 TRIM73Q86UV7 250 aa12.91□□□□□ -0.34
RNF4-215ENST00000511843 CAND1Q86VP6 1230 aaKnown RBP12.91□□□□□ -0.34
RNF4-215ENST00000511843 SPNS2Q8IVW8 549 aa12.91□□□□□ -0.34
RNF4-215ENST00000511843 LMNTD1Q8N9Z9 388 aa12.91□□□□□ -0.34
RNF4-215ENST00000511843 GALNT6Q8NCL4 622 aa12.91□□□□□ -0.34
RNF4-215ENST00000511843 ACTRT1Q8TDG2 376 aa12.91□□□□□ -0.34
RNF4-215ENST00000511843 ZFPM2Q8WW38 1151 aa12.91□□□□□ -0.34
RNF4-215ENST00000511843 UBXN4Q92575 508 aa12.91□□□□□ -0.34
RNF4-215ENST00000511843 EXTL1Q92935 676 aa12.91□□□□□ -0.34
RNF4-215ENST00000511843 PDLIM2Q96JY6 352 aa12.91□□□□□ -0.34
RNF4-215ENST00000511843 TTC1Q99614 292 aa12.91□□□□□ -0.34
RNF4-215ENST00000511843 KIFC1Q9BW19 673 aa12.91□□□□□ -0.34
RNF4-215ENST00000511843 SEMA5BQ9P283 1151 aa12.91□□□□□ -0.34
RNF4-215ENST00000511843 IL17BQ9UHF5 180 aa12.91□□□□□ -0.34
RNF4-215ENST00000511843 LNPEPQ9UIQ6 1025 aa12.91□□□□□ -0.34
RNF4-215ENST00000511843 ANAPC5Q9UJX4 755 aa12.91□□□□□ -0.34
RNF4-215ENST00000511843 POMT2Q9UKY4 750 aa12.91□□□□□ -0.34
RNF4-215ENST00000511843 SOX13Q9UN79 622 aa12.91□□□□□ -0.34
RNF4-215ENST00000511843 ICKQ9UPZ9 632 aa12.91□□□□□ -0.34
RNF4-215ENST00000511843 ASF1AQ9Y294 204 aa12.91□□□□□ -0.34
RNF4-215ENST00000511843 TDRKHQ9Y2W6 561 aaKnown RBP12.91□□□□□ -0.34
RNF4-215ENST00000511843 TMEM184BQ9Y519 407 aaPredicted RBP12.91□□□□□ -0.34
RNF4-215ENST00000511843 ATRXP46100 2492 aa12.91□□□□□ -0.34
RNF4-215ENST00000511843 CCDC88CQ9P219 2028 aa12.9□□□□□ -0.34
RNF4-215ENST00000511843 SLC9B1P1A6NJY1 282 aa12.9□□□□□ -0.34
RNF4-215ENST00000511843 QSOX1O00391 747 aa12.9□□□□□ -0.34
RNF4-215ENST00000511843 SPAG6O75602 509 aa12.9□□□□□ -0.34
RNF4-215ENST00000511843 GSTM1P09488 218 aa12.9□□□□□ -0.34
RNF4-215ENST00000511843 FGF5P12034 268 aa12.9□□□□□ -0.34
RNF4-215ENST00000511843 CDH3P22223 829 aa12.9□□□□□ -0.34
RNF4-215ENST00000511843 MAGEA6P43360 314 aa12.9□□□□□ -0.34
RNF4-215ENST00000511843 CDK16Q00536 496 aa12.9□□□□□ -0.34
RNF4-215ENST00000511843 GSTM4Q03013 218 aa12.9□□□□□ -0.34
RNF4-215ENST00000511843 HSPA14Q0VDF9 509 aa12.9□□□□□ -0.34
RNF4-215ENST00000511843 COL9A2Q14055 689 aaPredicted RBP12.9□□□□□ -0.34
RNF4-215ENST00000511843 AARS2Q5JTZ9 985 aaKnown RBP12.9□□□□□ -0.34
RNF4-215ENST00000511843 CASC4Q6P4E1 433 aa12.9□□□□□ -0.34
RNF4-215ENST00000511843 AMIGO1Q86WK6 493 aa12.9□□□□□ -0.34
RNF4-215ENST00000511843 AGGF1Q8N302 714 aaeCLIP12.9□□□□□ -0.34
RNF4-215ENST00000511843 PEX13Q92968 403 aa12.9□□□□□ -0.34
RNF4-215ENST00000511843 SGSM3Q96HU1 749 aa12.9□□□□□ -0.34
RNF4-215ENST00000511843 CAPZA3Q96KX2 299 aa12.9□□□□□ -0.34
RNF4-215ENST00000511843 NAP1L3Q99457 506 aaPredicted RBP12.9□□□□□ -0.34
RNF4-215ENST00000511843 ZPBPQ9BS86 351 aa12.9□□□□□ -0.34
RNF4-215ENST00000511843 DDX47Q9H0S4 455 aaKnown RBP12.9□□□□□ -0.34
RNF4-215ENST00000511843 MVB12BQ9H7P6 319 aa12.9□□□□□ -0.34
RNF4-215ENST00000511843 GPN2Q9H9Y4 310 aaPredicted RBP12.9□□□□□ -0.34
RNF4-215ENST00000511843 SOHLH2Q9NX45 425 aa12.9□□□□□ -0.34
RNF4-215ENST00000511843 TSR3Q9UJK0 312 aaKnown RBP12.9□□□□□ -0.34
RNF4-215ENST00000511843 CDYLQ9Y232 598 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms