RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 CEP76Q8TAP6 659 aa10.16□□□□□ -0.78
RFC1-211ENST00000509084 MDM1Q8TC05 714 aa10.16□□□□□ -0.78
RFC1-211ENST00000509084 PTERQ96BW5 349 aa10.16□□□□□ -0.78
RFC1-211ENST00000509084 HIST1H2AHQ96KK5 128 aa10.16□□□□□ -0.78
RFC1-211ENST00000509084 PRRX2Q99811 253 aa10.16□□□□□ -0.78
RFC1-211ENST00000509084 HIST1H2AJQ99878 128 aa10.16□□□□□ -0.78
RFC1-211ENST00000509084 PAIP2Q9BPZ3 127 aaKnown RBP10.16□□□□□ -0.78
RFC1-211ENST00000509084 H2AFJQ9BTM1 129 aa10.16□□□□□ -0.78
RFC1-211ENST00000509084 OSGEPL1Q9H4B0 414 aa10.16□□□□□ -0.78
RFC1-211ENST00000509084 ERVMER34-1Q9H9K5 563 aa10.16□□□□□ -0.78
RFC1-211ENST00000509084 MRPL40Q9NQ50 206 aaKnown RBP10.16□□□□□ -0.78
RFC1-211ENST00000509084 WASH6PQ9NQA3 447 aa10.16□□□□□ -0.78
RFC1-211ENST00000509084 KLC4Q9NSK0 619 aa10.16□□□□□ -0.78
RFC1-211ENST00000509084 GULP1Q9UBP9 304 aa10.16□□□□□ -0.78
RFC1-211ENST00000509084 FAM8A1Q9UBU6 413 aa10.16□□□□□ -0.78
RFC1-211ENST00000509084 APOBEC3BQ9UH17 382 aaKnown RBP10.16□□□□□ -0.78
RFC1-211ENST00000509084 DNAJC16Q9Y2G8 782 aa10.16□□□□□ -0.78
RFC1-211ENST00000509084 PRKAB1Q9Y478 270 aa10.16□□□□□ -0.78
RFC1-211ENST00000509084 OARD1Q9Y530 152 aa10.16□□□□□ -0.78
RFC1-211ENST00000509084 LRP4O75096 1905 aa10.15□□□□□ -0.78
RFC1-211ENST00000509084 PRR19A6NJB7 356 aa10.15□□□□□ -0.78
RFC1-211ENST00000509084 GFYI3L273 518 aa10.15□□□□□ -0.78
RFC1-211ENST00000509084 CDC7O00311 574 aa10.15□□□□□ -0.78
RFC1-211ENST00000509084 HRO43593 1189 aa10.15□□□□□ -0.78
RFC1-211ENST00000509084 KDM1AO60341 852 aa10.15□□□□□ -0.78
RFC1-211ENST00000509084 SNX2O60749 519 aa10.15□□□□□ -0.78
RFC1-211ENST00000509084 PSIP1O75475 530 aaKnown RBP10.15□□□□□ -0.78
RFC1-211ENST00000509084 FUCA1P04066 466 aa10.15□□□□□ -0.78
RFC1-211ENST00000509084 CSF2P04141 144 aa10.15□□□□□ -0.78
RFC1-211ENST00000509084 CTSEP14091 401 aa10.15□□□□□ -0.78
RFC1-211ENST00000509084 GFAPP14136 432 aa10.15□□□□□ -0.78
RFC1-211ENST00000509084 NME1P15531 152 aaKnown RBP10.15□□□□□ -0.78
RFC1-211ENST00000509084 MAP4P27816 1152 aaKnown RBP10.15□□□□□ -0.78
RFC1-211ENST00000509084 PREPP48147 710 aa10.15□□□□□ -0.78
RFC1-211ENST00000509084 WDR4P57081 412 aaKnown RBP10.15□□□□□ -0.78
RFC1-211ENST00000509084 HNRNPKP61978 463 aaKnown RBP eCLIP10.15□□□□□ -0.78
RFC1-211ENST00000509084 IRX4P78413 519 aa10.15□□□□□ -0.78
RFC1-211ENST00000509084 EIF2B5Q13144 721 aaKnown RBP10.15□□□□□ -0.78
RFC1-211ENST00000509084 SIM2Q14190 667 aaPredicted RBP10.15□□□□□ -0.78
RFC1-211ENST00000509084 PCLAFQ15004 111 aa10.15□□□□□ -0.78
RFC1-211ENST00000509084 OR4D1Q15615 310 aa10.15□□□□□ -0.78
RFC1-211ENST00000509084 PDK4Q16654 411 aa10.15□□□□□ -0.78
RFC1-211ENST00000509084 PPP1R3AQ16821 1122 aa10.15□□□□□ -0.78
RFC1-211ENST00000509084 LIPMQ5VYY2 423 aa10.15□□□□□ -0.78
RFC1-211ENST00000509084 ATG16L1Q676U5 607 aa10.15□□□□□ -0.78
RFC1-211ENST00000509084 SBSNQ6UWP8 590 aa10.15□□□□□ -0.78
RFC1-211ENST00000509084 NAPRTQ6XQN6 538 aa10.15□□□□□ -0.78
RFC1-211ENST00000509084 UBE2R2Q712K3 238 aaPredicted RBP10.15□□□□□ -0.78
RFC1-211ENST00000509084 RD3Q7Z3Z2 195 aa10.15□□□□□ -0.78
RFC1-211ENST00000509084 SYT12Q8IV01 421 aa10.15□□□□□ -0.78
RFC1-211ENST00000509084 VRK3Q8IV63 474 aa10.15□□□□□ -0.78
RFC1-211ENST00000509084 NUDCD3Q8IVD9 361 aa10.15□□□□□ -0.78
RFC1-211ENST00000509084 PDPRQ8NCN5 879 aa10.15□□□□□ -0.78
RFC1-211ENST00000509084 FBXO15Q8NCQ5 510 aaPredicted RBP10.15□□□□□ -0.78
RFC1-211ENST00000509084 PHC3Q8NDX5 983 aa10.15□□□□□ -0.78
RFC1-211ENST00000509084 MCOLN3Q8TDD5 553 aa10.15□□□□□ -0.78
RFC1-211ENST00000509084 ASB11Q8WXH4 323 aa10.15□□□□□ -0.78
RFC1-211ENST00000509084 TSACCQ96A04 125 aaPredicted RBP10.15□□□□□ -0.78
RFC1-211ENST00000509084 MAGEB18Q96M61 343 aa10.15□□□□□ -0.78
RFC1-211ENST00000509084 SLC12A9Q9BXP2 914 aa10.15□□□□□ -0.78
RFC1-211ENST00000509084 UNKQ9C0B0 810 aaKnown RBP10.15□□□□□ -0.78
RFC1-211ENST00000509084 OR52A5Q9H2C5 316 aa10.15□□□□□ -0.78
RFC1-211ENST00000509084 CCDC134Q9H6E4 229 aa10.15□□□□□ -0.78
RFC1-211ENST00000509084 PARVBQ9HBI1 364 aa10.15□□□□□ -0.78
RFC1-211ENST00000509084 CPSF2Q9P2I0 782 aaKnown RBP10.15□□□□□ -0.78
RFC1-211ENST00000509084 SLC23A2Q9UGH3 650 aa10.15□□□□□ -0.78
RFC1-211ENST00000509084 TSR3Q9UJK0 312 aaKnown RBP10.15□□□□□ -0.78
RFC1-211ENST00000509084 PILRBQ9UKJ0 227 aa10.15□□□□□ -0.78
RFC1-211ENST00000509084 KCNK6Q9Y257 313 aa10.15□□□□□ -0.78
RFC1-211ENST00000509084 PCYT1BQ9Y5K3 369 aaPredicted RBP10.15□□□□□ -0.78
RFC1-211ENST00000509084 HEBP2Q9Y5Z4 205 aa10.15□□□□□ -0.78
RFC1-211ENST00000509084 THADAQ6YHU6 1953 aa10.15□□□□□ -0.78
RFC1-211ENST00000509084 TNRC6BQ9UPQ9 1833 aaKnown RBP10.14□□□□□ -0.79
RFC1-211ENST00000509084 FAM86C2PA6NEL3 165 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 PDZK1P1A8MUH7 402 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 G3V2L1 256 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 STX16-NPEPL1H3BU86 382 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 STX16O14662 325 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 KLK8O60259 260 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 TRIM13O60858 407 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 IPO13O94829 963 aaKnown RBP10.14□□□□□ -0.79
RFC1-211ENST00000509084 SNUPNO95149 360 aaKnown RBP10.14□□□□□ -0.79
RFC1-211ENST00000509084 WNT1P04628 370 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 ANXA5P08758 320 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 JUNDP17535 347 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 ITPKAP23677 461 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 GRK2P25098 689 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 ACADLP28330 430 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 NDUFS1P28331 727 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 SERPINB5P36952 375 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 ACTR1BP42025 376 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 RPIAP49247 311 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 HNMTP50135 292 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 ALDH18A1P54886 795 aaKnown RBP10.14□□□□□ -0.79
RFC1-211ENST00000509084 DNAJB13P59910 316 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 ACTR1AP61163 376 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 CTBSQ01459 385 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 SRSF5Q13243 272 aaKnown RBP10.14□□□□□ -0.79
RFC1-211ENST00000509084 ELOCQ15369 112 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 TGFBIQ15582 683 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms