RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 LMAN1LQ9HAT1 526 aa3.77□□□□□ -1.81
TRAPPC13-208ENST00000505553 PDGFCQ9NRA1 345 aa3.77□□□□□ -1.81
TRAPPC13-208ENST00000505553 CYP39A1Q9NYL5 469 aa3.77□□□□□ -1.81
TRAPPC13-208ENST00000505553 HMG20BQ9P0W2 317 aa3.77□□□□□ -1.81
TRAPPC13-208ENST00000505553 ABT1Q9ULW3 272 aaKnown RBP3.77□□□□□ -1.81
TRAPPC13-208ENST00000505553 LOXL2Q9Y4K0 774 aa3.77□□□□□ -1.81
TRAPPC13-208ENST00000505553 SMIM30A4D0T7 59 aa3.76□□□□□ -1.81
TRAPPC13-208ENST00000505553 TMEM221A6NGB7 291 aa3.76□□□□□ -1.81
TRAPPC13-208ENST00000505553 LRRC3CA6NJW4 275 aa3.76□□□□□ -1.81
TRAPPC13-208ENST00000505553 KCNU1A8MYU2 1149 aa3.76□□□□□ -1.81
TRAPPC13-208ENST00000505553 PLK4O00444 970 aa3.76□□□□□ -1.81
TRAPPC13-208ENST00000505553 NDC80O14777 642 aa3.76□□□□□ -1.81
TRAPPC13-208ENST00000505553 ST8SIA3O43173 380 aa3.76□□□□□ -1.81
TRAPPC13-208ENST00000505553 SELENOFO60613 162 aa3.76□□□□□ -1.81
TRAPPC13-208ENST00000505553 ATG13O75143 517 aa3.76□□□□□ -1.81
TRAPPC13-208ENST00000505553 CNOT3O75175 753 aaKnown RBP3.76□□□□□ -1.81
TRAPPC13-208ENST00000505553 SLC16A8O95907 504 aa3.76□□□□□ -1.81
TRAPPC13-208ENST00000505553 C8orf89P0DMQ9 161 aa3.76□□□□□ -1.81
TRAPPC13-208ENST00000505553 SPP1P10451 314 aa3.76□□□□□ -1.81
TRAPPC13-208ENST00000505553 ARSBP15848 533 aa3.76□□□□□ -1.81
TRAPPC13-208ENST00000505553 TCF4P15884 667 aa3.76□□□□□ -1.81
TRAPPC13-208ENST00000505553 VCLP18206 1134 aa3.76□□□□□ -1.81
TRAPPC13-208ENST00000505553 AZGP1P25311 298 aaKnown RBP3.76□□□□□ -1.81
TRAPPC13-208ENST00000505553 HSD17B3P37058 310 aa3.76□□□□□ -1.81
TRAPPC13-208ENST00000505553 RPL3P39023 403 aaKnown RBP3.76□□□□□ -1.81
TRAPPC13-208ENST00000505553 LHX1P48742 406 aa3.76□□□□□ -1.81
TRAPPC13-208ENST00000505553 ALDH7A1P49419 539 aaKnown RBP3.76□□□□□ -1.81
TRAPPC13-208ENST00000505553 ZNF81P51508 661 aa3.76□□□□□ -1.81
TRAPPC13-208ENST00000505553 LUMP51884 338 aaPredicted RBP3.76□□□□□ -1.81
TRAPPC13-208ENST00000505553 PTENP60484 403 aa3.76□□□□□ -1.81
TRAPPC13-208ENST00000505553 PLA2G7Q13093 441 aa3.76□□□□□ -1.81
TRAPPC13-208ENST00000505553 GCNT6Q5T4J0 391 aa3.76□□□□□ -1.81
TRAPPC13-208ENST00000505553 MFSD12Q6NUT3 480 aa3.76□□□□□ -1.81
TRAPPC13-208ENST00000505553 BRAT1Q6PJG6 821 aa3.76□□□□□ -1.81
TRAPPC13-208ENST00000505553 ABRAXAS1Q6UWZ7 409 aa3.76□□□□□ -1.81
TRAPPC13-208ENST00000505553 PTF1AQ7RTS3 328 aa3.76□□□□□ -1.81
TRAPPC13-208ENST00000505553 EXOC3L1Q86VI1 746 aa3.76□□□□□ -1.81
TRAPPC13-208ENST00000505553 LILRB1Q8NHL6 650 aaPredicted RBP3.76□□□□□ -1.81
TRAPPC13-208ENST00000505553 ST7LQ8TDW4 575 aa3.76□□□□□ -1.81
TRAPPC13-208ENST00000505553 WFIKKN2Q8TEU8 576 aa3.76□□□□□ -1.81
TRAPPC13-208ENST00000505553 IGFBPL1Q8WX77 278 aa3.76□□□□□ -1.81
TRAPPC13-208ENST00000505553 BCL2L2Q92843 193 aaPredicted RBP3.76□□□□□ -1.81
TRAPPC13-208ENST00000505553 SNRNP40Q96DI7 357 aaKnown RBP3.76□□□□□ -1.81
TRAPPC13-208ENST00000505553 C5orf30Q96GV9 206 aa3.76□□□□□ -1.81
TRAPPC13-208ENST00000505553 C16orf45Q96MC5 204 aaPredicted RBP3.76□□□□□ -1.81
TRAPPC13-208ENST00000505553 KLHL5Q96PQ7 755 aa3.76□□□□□ -1.81
TRAPPC13-208ENST00000505553 PKP4Q99569 1192 aa3.76□□□□□ -1.81
TRAPPC13-208ENST00000505553 LMF2Q9BU23 707 aaKnown RBP3.76□□□□□ -1.81
TRAPPC13-208ENST00000505553 FOXP1Q9H334 677 aaPredicted RBP3.76□□□□□ -1.81
TRAPPC13-208ENST00000505553 DPAGT1Q9H3H5 408 aa3.76□□□□□ -1.81
TRAPPC13-208ENST00000505553 MYNNQ9NPC7 610 aa3.76□□□□□ -1.81
TRAPPC13-208ENST00000505553 SPG21Q9NZD8 308 aa3.76□□□□□ -1.81
TRAPPC13-208ENST00000505553 BLOC1S6Q9UL45 172 aa3.76□□□□□ -1.81
TRAPPC13-208ENST00000505553 COG5Q9UP83 839 aa3.76□□□□□ -1.81
TRAPPC13-208ENST00000505553 ATP6V0A2Q9Y487 856 aa3.76□□□□□ -1.81
TRAPPC13-208ENST00000505553 ZMYM2Q9UBW7 1377 aa3.75□□□□□ -1.81
TRAPPC13-208ENST00000505553 A0A1W2PPC1 479 aa3.75□□□□□ -1.81
TRAPPC13-208ENST00000505553 A0A1W2PPW3 197 aa3.75□□□□□ -1.81
TRAPPC13-208ENST00000505553 NEMP2A6NFY4 417 aa3.75□□□□□ -1.81
TRAPPC13-208ENST00000505553 SLC9B1P1A6NJY1 282 aa3.75□□□□□ -1.81
TRAPPC13-208ENST00000505553 ZNF814B7Z6K7 855 aa3.75□□□□□ -1.81
TRAPPC13-208ENST00000505553 VWA5AO00534 786 aa3.75□□□□□ -1.81
TRAPPC13-208ENST00000505553 DVL1O14640 695 aa3.75□□□□□ -1.81
TRAPPC13-208ENST00000505553 VEGFDO43915 354 aa3.75□□□□□ -1.81
TRAPPC13-208ENST00000505553 RAD51DO75771 328 aa3.75□□□□□ -1.81
TRAPPC13-208ENST00000505553 AKAP3O75969 853 aa3.75□□□□□ -1.81
TRAPPC13-208ENST00000505553 C9P02748 559 aa3.75□□□□□ -1.81
TRAPPC13-208ENST00000505553 PRKCGP05129 697 aa3.75□□□□□ -1.81
TRAPPC13-208ENST00000505553 NAGAP17050 411 aa3.75□□□□□ -1.81
TRAPPC13-208ENST00000505553 CD22P20273 847 aa3.75□□□□□ -1.81
TRAPPC13-208ENST00000505553 CD27P26842 260 aa3.75□□□□□ -1.81
TRAPPC13-208ENST00000505553 CCND3P30281 292 aaPredicted RBP3.75□□□□□ -1.81
TRAPPC13-208ENST00000505553 RGS7P49802 495 aa3.75□□□□□ -1.81
TRAPPC13-208ENST00000505553 ENTPD1P49961 510 aa3.75□□□□□ -1.81
TRAPPC13-208ENST00000505553 CLCNKAP51800 687 aa3.75□□□□□ -1.81
TRAPPC13-208ENST00000505553 CD81P60033 236 aa3.75□□□□□ -1.81
TRAPPC13-208ENST00000505553 SEC61BP60468 96 aaKnown RBP3.75□□□□□ -1.81
TRAPPC13-208ENST00000505553 DLK1P80370 383 aa3.75□□□□□ -1.81
TRAPPC13-208ENST00000505553 CTTNQ14247 550 aaKnown RBP3.75□□□□□ -1.81
TRAPPC13-208ENST00000505553 EFNB3Q15768 340 aa3.75□□□□□ -1.81
TRAPPC13-208ENST00000505553 SGCBQ16585 318 aa3.75□□□□□ -1.81
TRAPPC13-208ENST00000505553 ZNF284Q2VY69 593 aa3.75□□□□□ -1.81
TRAPPC13-208ENST00000505553 HFEQ30201 348 aa3.75□□□□□ -1.81
TRAPPC13-208ENST00000505553 AARDQ4LEZ3 155 aa3.75□□□□□ -1.81
TRAPPC13-208ENST00000505553 TCTE1Q5JU00 501 aa3.75□□□□□ -1.81
TRAPPC13-208ENST00000505553 WASHC2DQ5SRD0 308 aa3.75□□□□□ -1.81
TRAPPC13-208ENST00000505553 NHLRC1Q6VVB1 395 aa3.75□□□□□ -1.81
TRAPPC13-208ENST00000505553 TMPRSS11FQ6ZWK6 438 aa3.75□□□□□ -1.81
TRAPPC13-208ENST00000505553 ADCK1Q86TW2 530 aa3.75□□□□□ -1.81
TRAPPC13-208ENST00000505553 FOXRED2Q8IWF2 684 aa3.75□□□□□ -1.81
TRAPPC13-208ENST00000505553 MRPL43Q8N983 215 aaKnown RBP3.75□□□□□ -1.81
TRAPPC13-208ENST00000505553 MIGA1Q8NAN2 632 aa3.75□□□□□ -1.81
TRAPPC13-208ENST00000505553 PPFIBP2Q8ND30 876 aa3.75□□□□□ -1.81
TRAPPC13-208ENST00000505553 SPATA3Q8NHX4 192 aa3.75□□□□□ -1.81
TRAPPC13-208ENST00000505553 DENND1AQ8TEH3 1009 aa3.75□□□□□ -1.81
TRAPPC13-208ENST00000505553 LPAR1Q92633 364 aa3.75□□□□□ -1.81
TRAPPC13-208ENST00000505553 RIT1Q92963 219 aa3.75□□□□□ -1.81
TRAPPC13-208ENST00000505553 RHBDF1Q96CC6 855 aa3.75□□□□□ -1.81
TRAPPC13-208ENST00000505553 STAMBPL1Q96FJ0 436 aa3.75□□□□□ -1.81
TRAPPC13-208ENST00000505553 QRFPRQ96P65 431 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms