RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 LEFTY2O00292 366 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 CCNT1O60563 726 aaKnown RBP4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 GPC4O75487 556 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 CRCPO75575 148 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 RSL1D1O76021 490 aaKnown RBP4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 MOCS3O95396 460 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 VNN2O95498 520 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 CXCL14O95715 111 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 TFP02787 698 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 SLC2A4P14672 509 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 ZNF182P17025 639 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 IGFBP2P18065 325 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 BMP7P18075 431 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 CDH3P22223 829 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 ACP1P24666 158 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 PTPN4P29074 926 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 TYK2P29597 1187 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 OR1G1P47890 313 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 EEFSECP57772 596 aaKnown RBP4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 TFAP4Q01664 338 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 RESTQ13127 1097 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 SNTB2Q13425 540 aaKnown RBP4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 DNASE1L3Q13609 305 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 PDE7AQ13946 482 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 HLXQ14774 488 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 DRAP1Q14919 205 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 EFTUD2Q15029 972 aaKnown RBP eCLIP4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 ZNF124Q15973 351 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 USH1GQ495M9 461 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 NADK2Q4G0N4 442 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 CDONQ4KMG0 1287 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 IQCCQ4KMZ1 466 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 KLHL26Q53HC5 615 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 ATAD3BQ5T9A4 648 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 FAM102AQ5T9C2 384 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 HIST2H2BCQ6DN03 193 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 HIST2H2BDQ6DRA6 164 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 MICALCLQ6ZW33 695 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 HAPLN4Q86UW8 402 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 RFX6Q8HWS3 928 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 KRTAP19-1Q8IUB9 90 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 SLC22A9Q8IVM8 553 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 CFAP206Q8IYR0 622 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 PM20D2Q8IYS1 436 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 FBXO39Q8N4B4 442 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 SCAIQ8N9R8 606 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 B3GALNT2Q8NCR0 500 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 OR52L2PQ8NGH6 319 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 OR52K1Q8NGK4 314 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 OR13C2Q8NGS9 318 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 OR14L1PQ8NHC6 308 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 GLMPQ8WWB7 406 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 ANP32BQ92688 251 aaKnown RBP4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 EEF2KMTQ96G04 330 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 TMEM68Q96MH6 324 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 NECTIN4Q96NY8 510 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 PAIP2Q9BPZ3 127 aaKnown RBP4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 BCL7BQ9BQE9 202 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 SPATC1LQ9H0A9 340 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 PPIL3Q9H2H8 161 aaKnown RBP4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 TFB2MQ9H5Q4 396 aaKnown RBP4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 ZCCHC4Q9H5U6 513 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 VCPKMTQ9H867 229 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 EPB41L5Q9HCM4 733 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 GPN1Q9HCN4 374 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 RPRD1BQ9NQG5 326 aaKnown RBP4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 HPS4Q9NQG7 708 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 FAM118AQ9NWS6 357 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 PTGFRNQ9P2B2 879 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 ANKFY1Q9P2R3 1169 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 POLLQ9UGP5 575 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 SLC24A2Q9UI40 661 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 B3GNT3Q9Y2A9 372 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 REXO2Q9Y3B8 237 aaKnown RBP4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 FAM96BQ9Y3D0 163 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 TCAF1Q9Y4C2 921 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 N4BP2Q86UW6 1770 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 ASTN2O75129 1339 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 FANCIQ9NVI1 1328 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 TRBV2A0A0J9YWF9 115 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 A0A1W2PS29 197 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 TRIM49BA6NDI0 452 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 OR6C68A6NDL8 312 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 ARHGAP42A6NI28 874 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 SDR42E2A6NKP2 422 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 E9PBE3 544 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 L7N2F9 121 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 PLK4O00444 970 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 RNASET2O00584 256 aaKnown RBP4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 PPP6CO00743 305 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 OGG1O15527 345 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 SPRY2O43597 315 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 STRNO43815 780 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 ZNF821O75541 412 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 ALDOCP09972 364 aaKnown RBP4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 SKILP12757 684 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 GJA1P17302 382 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 ACO1P21399 889 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms