RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 RAB15P59190 212 aa12.46□□□□□ -0.41
HSPG2-213ENST00000498495 MC2RQ01718 297 aa12.46□□□□□ -0.41
HSPG2-213ENST00000498495 DHX9Q08211 1270 aaKnown RBP12.46□□□□□ -0.41
HSPG2-213ENST00000498495 MORF4L2Q15014 288 aa12.46□□□□□ -0.41
HSPG2-213ENST00000498495 LONRF1Q17RB8 773 aa12.46□□□□□ -0.41
HSPG2-213ENST00000498495 TYSND1Q2T9J0 566 aa12.46□□□□□ -0.41
HSPG2-213ENST00000498495 COL28A1Q2UY09 1125 aa12.46□□□□□ -0.41
HSPG2-213ENST00000498495 DNAJC21Q5F1R6 531 aaKnown RBP12.46□□□□□ -0.41
HSPG2-213ENST00000498495 TBC1D21Q8IYX1 336 aa12.46□□□□□ -0.41
HSPG2-213ENST00000498495 PDIK1LQ8N165 341 aa12.46□□□□□ -0.41
HSPG2-213ENST00000498495 SPATA4Q8NEY3 305 aa12.46□□□□□ -0.41
HSPG2-213ENST00000498495 OR52E1Q8NGJ3 308 aa12.46□□□□□ -0.41
HSPG2-213ENST00000498495 GSDMBQ8TAX9 411 aa12.46□□□□□ -0.41
HSPG2-213ENST00000498495 CALML6Q8TD86 181 aa12.46□□□□□ -0.41
HSPG2-213ENST00000498495 TRIM51Q9BSJ1 452 aa12.46□□□□□ -0.41
HSPG2-213ENST00000498495 TRIM31Q9BZY9 425 aa12.46□□□□□ -0.41
HSPG2-213ENST00000498495 TRIT1Q9H3H1 467 aaKnown RBP12.46□□□□□ -0.41
HSPG2-213ENST00000498495 TFB2MQ9H5Q4 396 aaKnown RBP12.46□□□□□ -0.41
HSPG2-213ENST00000498495 FBXO8Q9NRD0 319 aa12.46□□□□□ -0.41
HSPG2-213ENST00000498495 C20orf96Q9NUD7 363 aaPredicted RBP12.46□□□□□ -0.41
HSPG2-213ENST00000498495 IL1RAPL1Q9NZN1 696 aa12.46□□□□□ -0.41
HSPG2-213ENST00000498495 POLG2Q9UHN1 485 aa12.46□□□□□ -0.41
HSPG2-213ENST00000498495 PCDHB11Q9Y5F2 797 aa12.46□□□□□ -0.41
HSPG2-213ENST00000498495 PCDHGA3Q9Y5H0 932 aa12.46□□□□□ -0.41
HSPG2-213ENST00000498495 FAM169AQ9Y6X4 670 aa12.46□□□□□ -0.41
HSPG2-213ENST00000498495 CHD8Q9HCK8 2581 aa12.46□□□□□ -0.42
HSPG2-213ENST00000498495 MAP1BP46821 2468 aaKnown RBP12.46□□□□□ -0.42
HSPG2-213ENST00000498495 FRYQ5TBA9 3013 aa12.45□□□□□ -0.42
HSPG2-213ENST00000498495 H3BMM5 538 aa12.45□□□□□ -0.42
HSPG2-213ENST00000498495 NDC80O14777 642 aa12.45□□□□□ -0.42
HSPG2-213ENST00000498495 POLR1CO15160 346 aaPredicted RBP12.45□□□□□ -0.42
HSPG2-213ENST00000498495 KDM1AO60341 852 aa12.45□□□□□ -0.42
HSPG2-213ENST00000498495 GPC4O75487 556 aa12.45□□□□□ -0.42
HSPG2-213ENST00000498495 TTC4O95801 387 aa12.45□□□□□ -0.42
HSPG2-213ENST00000498495 ESR1P03372 595 aa12.45□□□□□ -0.42
HSPG2-213ENST00000498495 PGAM1P18669 254 aa12.45□□□□□ -0.42
HSPG2-213ENST00000498495 CHRM3P20309 590 aa12.45□□□□□ -0.42
HSPG2-213ENST00000498495 AOAHP28039 575 aa12.45□□□□□ -0.42
HSPG2-213ENST00000498495 ARL4DP49703 201 aa12.45□□□□□ -0.42
HSPG2-213ENST00000498495 ITGA8P53708 1063 aa12.45□□□□□ -0.42
HSPG2-213ENST00000498495 PPP1CAP62136 330 aa12.45□□□□□ -0.42
HSPG2-213ENST00000498495 FOXM1Q08050 763 aa12.45□□□□□ -0.42
HSPG2-213ENST00000498495 ABRQ12979 859 aa12.45□□□□□ -0.42
HSPG2-213ENST00000498495 CTBP1Q13363 440 aa12.45□□□□□ -0.42
HSPG2-213ENST00000498495 TMED2Q15363 201 aa12.45□□□□□ -0.42
HSPG2-213ENST00000498495 BBS9Q3SYG4 887 aa12.45□□□□□ -0.42
HSPG2-213ENST00000498495 DNTTIP2Q5QJE6 756 aaKnown RBP12.45□□□□□ -0.42
HSPG2-213ENST00000498495 ANKS6Q68DC2 871 aa12.45□□□□□ -0.42
HSPG2-213ENST00000498495 HIBCHQ6NVY1 386 aaPredicted RBP12.45□□□□□ -0.42
HSPG2-213ENST00000498495 CEACAM20Q6UY09 585 aa12.45□□□□□ -0.42
HSPG2-213ENST00000498495 CENPUQ71F23 418 aa12.45□□□□□ -0.42
HSPG2-213ENST00000498495 OTOAQ7RTW8 1153 aa12.45□□□□□ -0.42
HSPG2-213ENST00000498495 MAATS1Q7Z4T9 603 aa12.45□□□□□ -0.42
HSPG2-213ENST00000498495 PRSS42Q7Z5A4 293 aa12.45□□□□□ -0.42
HSPG2-213ENST00000498495 AMIGO1Q86WK6 493 aa12.45□□□□□ -0.42
HSPG2-213ENST00000498495 ZFAND4Q86XD8 727 aa12.45□□□□□ -0.42
HSPG2-213ENST00000498495 CILP2Q8IUL8 1156 aa12.45□□□□□ -0.42
HSPG2-213ENST00000498495 LMNTD2Q8IXW0 634 aa12.45□□□□□ -0.42
HSPG2-213ENST00000498495 SLC22A15Q8IZD6 547 aa12.45□□□□□ -0.42
HSPG2-213ENST00000498495 AGGF1Q8N302 714 aaeCLIP12.45□□□□□ -0.42
HSPG2-213ENST00000498495 BMPERQ8N8U9 685 aa12.45□□□□□ -0.42
HSPG2-213ENST00000498495 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.45□□□□□ -0.42
HSPG2-213ENST00000498495 BBOF1Q8ND07 529 aa12.45□□□□□ -0.42
HSPG2-213ENST00000498495 OR5AR1Q8NGP9 310 aa12.45□□□□□ -0.42
HSPG2-213ENST00000498495 CFAP61Q8NHU2 1237 aa12.45□□□□□ -0.42
HSPG2-213ENST00000498495 GABPB2Q8TAK5 448 aaPredicted RBP12.45□□□□□ -0.42
HSPG2-213ENST00000498495 LKAAEAR1Q8TD35 194 aa12.45□□□□□ -0.42
HSPG2-213ENST00000498495 KLHL6Q8WZ60 621 aa12.45□□□□□ -0.42
HSPG2-213ENST00000498495 UBXN4Q92575 508 aa12.45□□□□□ -0.42
HSPG2-213ENST00000498495 LPGAT1Q92604 370 aa12.45□□□□□ -0.42
HSPG2-213ENST00000498495 SNF8Q96H20 258 aa12.45□□□□□ -0.42
HSPG2-213ENST00000498495 TEFMQ96QE5 360 aaKnown RBP12.45□□□□□ -0.42
HSPG2-213ENST00000498495 CD180Q99467 661 aa12.45□□□□□ -0.42
HSPG2-213ENST00000498495 MAP3K3Q99759 626 aa12.45□□□□□ -0.42
HSPG2-213ENST00000498495 EBNA1BP2Q99848 306 aaKnown RBP12.45□□□□□ -0.42
HSPG2-213ENST00000498495 CTRCQ99895 268 aa12.45□□□□□ -0.42
HSPG2-213ENST00000498495 NAT9Q9BTE0 207 aa12.45□□□□□ -0.42
HSPG2-213ENST00000498495 HGH1Q9BTY7 390 aa12.45□□□□□ -0.42
HSPG2-213ENST00000498495 DDA1Q9BW61 102 aa12.45□□□□□ -0.42
HSPG2-213ENST00000498495 ZNF768Q9H5H4 540 aaKnown RBP12.45□□□□□ -0.42
HSPG2-213ENST00000498495 INTS10Q9NVR2 710 aaKnown RBP12.45□□□□□ -0.42
HSPG2-213ENST00000498495 FOXJ2Q9P0K8 574 aa12.45□□□□□ -0.42
HSPG2-213ENST00000498495 ACSL6Q9UKU0 697 aa12.45□□□□□ -0.42
HSPG2-213ENST00000498495 TDRKHQ9Y2W6 561 aaKnown RBP12.45□□□□□ -0.42
HSPG2-213ENST00000498495 SNX24Q9Y343 169 aa12.45□□□□□ -0.42
HSPG2-213ENST00000498495 B3GALT1Q9Y5Z6 326 aa12.45□□□□□ -0.42
HSPG2-213ENST00000498495 ASPMQ8IZT6 3477 aa12.45□□□□□ -0.42
HSPG2-213ENST00000498495 PIKFYVEQ9Y2I7 2098 aa12.44□□□□□ -0.42
HSPG2-213ENST00000498495 FAM187AA6NFU0 413 aa12.44□□□□□ -0.42
HSPG2-213ENST00000498495 E5RI56 91 aa12.44□□□□□ -0.42
HSPG2-213ENST00000498495 MATN2O00339 956 aa12.44□□□□□ -0.42
HSPG2-213ENST00000498495 SLCO2B1O94956 709 aa12.44□□□□□ -0.42
HSPG2-213ENST00000498495 S1PR4O95977 384 aa12.44□□□□□ -0.42
HSPG2-213ENST00000498495 LIPCP11150 499 aa12.44□□□□□ -0.42
HSPG2-213ENST00000498495 PKMP14618 531 aaKnown RBP12.44□□□□□ -0.42
HSPG2-213ENST00000498495 ADARP55265 1226 aaKnown RBP12.44□□□□□ -0.42
HSPG2-213ENST00000498495 MRPS25P82663 173 aaKnown RBP12.44□□□□□ -0.42
HSPG2-213ENST00000498495 TLE3Q04726 772 aa12.44□□□□□ -0.42
HSPG2-213ENST00000498495 MSS51Q4VC12 460 aa12.44□□□□□ -0.42
HSPG2-213ENST00000498495 HSP90AA5PQ58FG0 334 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms