RNA–Protein interactions for RNA: ENST00000496325.5

PRKCZ-222, Transcript of protein kinase C zeta, human

TSL 4

Gene PRKCZ, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCZ-222	ENST00000496325	LSMEM2	Q8N112	164 aa		15.45	■□□□□ 0.06
PRKCZ-222	ENST00000496325	KRT222	Q8N1A0	295 aa		15.45	■□□□□ 0.06
PRKCZ-222	ENST00000496325	PHC3	Q8NDX5	983 aa		15.45	■□□□□ 0.06
PRKCZ-222	ENST00000496325	SPATA4	Q8NEY3	305 aa		15.45	■□□□□ 0.06
PRKCZ-222	ENST00000496325	RUNDC3B	Q96NL0	473 aa		15.45	■□□□□ 0.06
PRKCZ-222	ENST00000496325	NRTN	Q99748	197 aa		15.45	■□□□□ 0.06
PRKCZ-222	ENST00000496325	DPYSL5	Q9BPU6	564 aa		15.45	■□□□□ 0.06
PRKCZ-222	ENST00000496325	TRIM31	Q9BZY9	425 aa		15.45	■□□□□ 0.06
PRKCZ-222	ENST00000496325	SAMD15	Q9P1V8	674 aa		15.45	■□□□□ 0.06
PRKCZ-222	ENST00000496325	PISD	Q9UG56	409 aa		15.45	■□□□□ 0.06
PRKCZ-222	ENST00000496325	KLHL3	Q9UH77	587 aa		15.45	■□□□□ 0.06
PRKCZ-222	ENST00000496325	MAD1L1	Q9Y6D9	718 aa		15.45	■□□□□ 0.06
PRKCZ-222	ENST00000496325	RPS6KL1	Q9Y6S9	549 aa		15.45	■□□□□ 0.06
PRKCZ-222	ENST00000496325	USP9X	Q93008	2570 aa	Predicted RBP	15.44	■□□□□ 0.06
PRKCZ-222	ENST00000496325	SLC5A10	A0PJK1	596 aa		15.44	■□□□□ 0.06
PRKCZ-222	ENST00000496325	PRMT5	O14744	637 aa	Predicted RBP	15.44	■□□□□ 0.06
PRKCZ-222	ENST00000496325	F7	P08709	466 aa	Predicted RBP	15.44	■□□□□ 0.06
PRKCZ-222	ENST00000496325	GSTM1	P09488	218 aa		15.44	■□□□□ 0.06
PRKCZ-222	ENST00000496325	JMJD7	P0C870	316 aa		15.44	■□□□□ 0.06
PRKCZ-222	ENST00000496325	CCR7	P32248	378 aa		15.44	■□□□□ 0.06
PRKCZ-222	ENST00000496325	PPARG	P37231	505 aa	Predicted RBP	15.44	■□□□□ 0.06
PRKCZ-222	ENST00000496325	LEPR	P48357	1165 aa	Known RBP	15.44	■□□□□ 0.06
PRKCZ-222	ENST00000496325	CSE1L	P55060	971 aa	Known RBP	15.44	■□□□□ 0.06
PRKCZ-222	ENST00000496325	PPP1CA	P62136	330 aa		15.44	■□□□□ 0.06
PRKCZ-222	ENST00000496325	GSTM4	Q03013	218 aa		15.44	■□□□□ 0.06
PRKCZ-222	ENST00000496325	DHX9	Q08211	1270 aa	Known RBP	15.44	■□□□□ 0.06
PRKCZ-222	ENST00000496325	C2orf54	Q08AI8	447 aa		15.44	■□□□□ 0.06
PRKCZ-222	ENST00000496325	RPA4	Q13156	261 aa		15.44	■□□□□ 0.06
PRKCZ-222	ENST00000496325	TRA2A	Q13595	282 aa	Known RBP eCLIP	15.44	■□□□□ 0.06
PRKCZ-222	ENST00000496325	BOP1	Q14137	746 aa	Known RBP	15.44	■□□□□ 0.06
PRKCZ-222	ENST00000496325	ARMC3	Q5W041	872 aa		15.44	■□□□□ 0.06
PRKCZ-222	ENST00000496325	ARHGAP22	Q7Z5H3	698 aa		15.44	■□□□□ 0.06
PRKCZ-222	ENST00000496325	HOOK3	Q86VS8	718 aa		15.44	■□□□□ 0.06
PRKCZ-222	ENST00000496325	OTUD6B	Q8N6M0	293 aa		15.44	■□□□□ 0.06
PRKCZ-222	ENST00000496325	C16orf45	Q96MC5	204 aa	Predicted RBP	15.44	■□□□□ 0.06
PRKCZ-222	ENST00000496325	FERD3L	Q96RJ6	166 aa		15.44	■□□□□ 0.06
PRKCZ-222	ENST00000496325	CMKLR1	Q99788	373 aa		15.44	■□□□□ 0.06
PRKCZ-222	ENST00000496325	CARD6	Q9BX69	1037 aa		15.44	■□□□□ 0.06
PRKCZ-222	ENST00000496325	P2RY12	Q9H244	342 aa		15.44	■□□□□ 0.06
PRKCZ-222	ENST00000496325	EPB41L1	Q9H4G0	881 aa		15.44	■□□□□ 0.06
PRKCZ-222	ENST00000496325	OCIAD1	Q9NX40	245 aa		15.44	■□□□□ 0.06
PRKCZ-222	ENST00000496325	MN1	Q10571	1320 aa	Predicted RBP	15.43	■□□□□ 0.06
PRKCZ-222	ENST00000496325	RELN	P78509	3460 aa		15.43	■□□□□ 0.06
PRKCZ-222	ENST00000496325	UBA6	A0AVT1	1052 aa	Predicted RBP	15.43	■□□□□ 0.06
PRKCZ-222	ENST00000496325	BHMG1	C9JSJ3	638 aa	Predicted RBP	15.43	■□□□□ 0.06
PRKCZ-222	ENST00000496325	LIN7A	O14910	233 aa	Predicted RBP	15.43	■□□□□ 0.06
PRKCZ-222	ENST00000496325	HGS	O14964	777 aa	Predicted RBP	15.43	■□□□□ 0.06
PRKCZ-222	ENST00000496325	TP73	O15350	636 aa		15.43	■□□□□ 0.06
PRKCZ-222	ENST00000496325	CAPN5	O15484	640 aa	Predicted RBP	15.43	■□□□□ 0.06
PRKCZ-222	ENST00000496325	NDUFS3	O75489	264 aa		15.43	■□□□□ 0.06
PRKCZ-222	ENST00000496325	C9	P02748	559 aa		15.43	■□□□□ 0.06
PRKCZ-222	ENST00000496325	FGF3	P11487	239 aa	Predicted RBP	15.43	■□□□□ 0.06
PRKCZ-222	ENST00000496325	ACADL	P28330	430 aa		15.43	■□□□□ 0.06
PRKCZ-222	ENST00000496325	CD151	P48509	253 aa		15.43	■□□□□ 0.06
PRKCZ-222	ENST00000496325	ITGA8	P53708	1063 aa		15.43	■□□□□ 0.06
PRKCZ-222	ENST00000496325	MAPK10	P53779	464 aa		15.43	■□□□□ 0.06
PRKCZ-222	ENST00000496325	EIF3B	P55884	814 aa	Known RBP	15.43	■□□□□ 0.06
PRKCZ-222	ENST00000496325	ERVPABLB-1	P60509	514 aa		15.43	■□□□□ 0.06
PRKCZ-222	ENST00000496325	TYSND1	Q2T9J0	566 aa		15.43	■□□□□ 0.06
PRKCZ-222	ENST00000496325	ZNF789	Q5FWF6	425 aa		15.43	■□□□□ 0.06
PRKCZ-222	ENST00000496325	HIBCH	Q6NVY1	386 aa	Predicted RBP	15.43	■□□□□ 0.06
PRKCZ-222	ENST00000496325	NEPRO	Q6NW34	567 aa		15.43	■□□□□ 0.06
PRKCZ-222	ENST00000496325	CENPU	Q71F23	418 aa		15.43	■□□□□ 0.06
PRKCZ-222	ENST00000496325	PLXDC1	Q8IUK5	500 aa		15.43	■□□□□ 0.06
PRKCZ-222	ENST00000496325	VRK3	Q8IV63	474 aa		15.43	■□□□□ 0.06
PRKCZ-222	ENST00000496325	IGDCC3	Q8IVU1	814 aa		15.43	■□□□□ 0.06
PRKCZ-222	ENST00000496325	UNC5B	Q8IZJ1	945 aa		15.43	■□□□□ 0.06
PRKCZ-222	ENST00000496325	TFG	Q92734	400 aa	Predicted RBP	15.43	■□□□□ 0.06
PRKCZ-222	ENST00000496325	TMEM159	Q96B96	161 aa		15.43	■□□□□ 0.06
PRKCZ-222	ENST00000496325	STAMBPL1	Q96FJ0	436 aa		15.43	■□□□□ 0.06
PRKCZ-222	ENST00000496325	TGM7	Q96PF1	710 aa		15.43	■□□□□ 0.06
PRKCZ-222	ENST00000496325	DPH1	Q9BZG8	443 aa		15.43	■□□□□ 0.06
PRKCZ-222	ENST00000496325	FAM117A	Q9C073	453 aa		15.43	■□□□□ 0.06
PRKCZ-222	ENST00000496325	KIR3DX1	Q9H7L2	352 aa		15.43	■□□□□ 0.06
PRKCZ-222	ENST00000496325	SLC24A2	Q9UI40	661 aa		15.43	■□□□□ 0.06
PRKCZ-222	ENST00000496325	EFCAB8	A8MWE9	144 aa		15.42	■□□□□ 0.06
PRKCZ-222	ENST00000496325	KIF1C	O43896	1103 aa	Known RBP	15.42	■□□□□ 0.06
PRKCZ-222	ENST00000496325	USP1	O94782	785 aa		15.42	■□□□□ 0.06
PRKCZ-222	ENST00000496325	ITGA2B	P08514	1039 aa		15.42	■□□□□ 0.06
PRKCZ-222	ENST00000496325	PAM	P19021	973 aa		15.42	■□□□□ 0.06
PRKCZ-222	ENST00000496325	RPS3	P23396	243 aa	Known RBP eCLIP	15.42	■□□□□ 0.06
PRKCZ-222	ENST00000496325	FMO4	P31512	558 aa		15.42	■□□□□ 0.06
PRKCZ-222	ENST00000496325	SLC5A2	P31639	672 aa		15.42	■□□□□ 0.06
PRKCZ-222	ENST00000496325	RPL21	P46778	160 aa	Known RBP	15.42	■□□□□ 0.06
PRKCZ-222	ENST00000496325	CAPZB	P47756	277 aa		15.42	■□□□□ 0.06
PRKCZ-222	ENST00000496325	KRT33B	Q14525	404 aa		15.42	■□□□□ 0.06
PRKCZ-222	ENST00000496325	MORF4L2	Q15014	288 aa		15.42	■□□□□ 0.06
PRKCZ-222	ENST00000496325	PLCL1	Q15111	1095 aa		15.42	■□□□□ 0.06
PRKCZ-222	ENST00000496325	LINC00303	Q3SY05	128 aa		15.42	■□□□□ 0.06
PRKCZ-222	ENST00000496325	BBS9	Q3SYG4	887 aa		15.42	■□□□□ 0.06
PRKCZ-222	ENST00000496325	CTSL3P	Q5NE16	218 aa		15.42	■□□□□ 0.06
PRKCZ-222	ENST00000496325	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	15.42	■□□□□ 0.06
PRKCZ-222	ENST00000496325	MRNIP	Q6NTE8	343 aa		15.42	■□□□□ 0.06
PRKCZ-222	ENST00000496325	ZNF449	Q6P9G9	518 aa		15.42	■□□□□ 0.06
PRKCZ-222	ENST00000496325	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	15.42	■□□□□ 0.06
PRKCZ-222	ENST00000496325	CLEC14A	Q86T13	490 aa		15.42	■□□□□ 0.06
PRKCZ-222	ENST00000496325	CILP2	Q8IUL8	1156 aa		15.42	■□□□□ 0.06
PRKCZ-222	ENST00000496325	ZFPM2	Q8WW38	1151 aa		15.42	■□□□□ 0.06
PRKCZ-222	ENST00000496325	LPGAT1	Q92604	370 aa		15.42	■□□□□ 0.06
PRKCZ-222	ENST00000496325	USP7	Q93009	1102 aa		15.42	■□□□□ 0.06

Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms