RNA–Protein interactions for RNA: ENST00000496071.5

COMMD3-214, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,150 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-214ENST00000496071 FNTAP49354 379 aa16.59■□□□□ 0.25
COMMD3-214ENST00000496071 ARL4DP49703 201 aa16.59■□□□□ 0.25
COMMD3-214ENST00000496071 BOP1Q14137 746 aaKnown RBP16.59■□□□□ 0.25
COMMD3-214ENST00000496071 MAP7Q14244 749 aa16.59■□□□□ 0.25
COMMD3-214ENST00000496071 SEMA3AQ14563 771 aa16.59■□□□□ 0.25
COMMD3-214ENST00000496071 SYTL3Q4VX76 610 aa16.59■□□□□ 0.25
COMMD3-214ENST00000496071 BPHLQ86WA6 291 aaPredicted RBP16.59■□□□□ 0.25
COMMD3-214ENST00000496071 NLGN4XQ8N0W4 816 aa16.59■□□□□ 0.25
COMMD3-214ENST00000496071 PHC3Q8NDX5 983 aa16.59■□□□□ 0.25
COMMD3-214ENST00000496071 MCUQ8NE86 351 aa16.59■□□□□ 0.25
COMMD3-214ENST00000496071 NLGN4YQ8NFZ3 816 aaPredicted RBP16.59■□□□□ 0.25
COMMD3-214ENST00000496071 SLC41A2Q96JW4 573 aa16.59■□□□□ 0.25
COMMD3-214ENST00000496071 MAP3K3Q99759 626 aa16.59■□□□□ 0.25
COMMD3-214ENST00000496071 PDE7BQ9NP56 450 aa16.59■□□□□ 0.25
COMMD3-214ENST00000496071 SYBUQ9NX95 663 aa16.59■□□□□ 0.25
COMMD3-214ENST00000496071 POLG2Q9UHN1 485 aa16.59■□□□□ 0.25
COMMD3-214ENST00000496071 SOX13Q9UN79 622 aa16.59■□□□□ 0.25
COMMD3-214ENST00000496071 PRMT5O14744 637 aaPredicted RBP16.58■□□□□ 0.24
COMMD3-214ENST00000496071 PFDN6O15212 129 aa16.58■□□□□ 0.24
COMMD3-214ENST00000496071 KDM1AO60341 852 aa16.58■□□□□ 0.24
COMMD3-214ENST00000496071 STK17BO94768 372 aa16.58■□□□□ 0.24
COMMD3-214ENST00000496071 FGF5P12034 268 aa16.58■□□□□ 0.24
COMMD3-214ENST00000496071 POLR2CP19387 275 aaPredicted RBP16.58■□□□□ 0.24
COMMD3-214ENST00000496071 ACADLP28330 430 aa16.58■□□□□ 0.24
COMMD3-214ENST00000496071 PPP1CAP62136 330 aa16.58■□□□□ 0.24
COMMD3-214ENST00000496071 SH3BP2P78314 561 aa16.58■□□□□ 0.24
COMMD3-214ENST00000496071 HSD11B2P80365 405 aa16.58■□□□□ 0.24
COMMD3-214ENST00000496071 ACY1Q03154 408 aa16.58■□□□□ 0.24
COMMD3-214ENST00000496071 BRD3Q15059 726 aa16.58■□□□□ 0.24
COMMD3-214ENST00000496071 MRNIPQ6NTE8 343 aa16.58■□□□□ 0.24
COMMD3-214ENST00000496071 SDCCAG8Q86SQ7 713 aaPredicted RBP16.58■□□□□ 0.24
COMMD3-214ENST00000496071 VASH2Q86V25 355 aa16.58■□□□□ 0.24
COMMD3-214ENST00000496071 LRRC6Q86X45 466 aa16.58■□□□□ 0.24
COMMD3-214ENST00000496071 TBC1D21Q8IYX1 336 aa16.58■□□□□ 0.24
COMMD3-214ENST00000496071 OR52E1Q8NGJ3 308 aa16.58■□□□□ 0.24
COMMD3-214ENST00000496071 ASZ1Q8WWH4 475 aa16.58■□□□□ 0.24
COMMD3-214ENST00000496071 CPT1BQ92523 772 aa16.58■□□□□ 0.24
COMMD3-214ENST00000496071 BBC3Q96PG8 261 aaPredicted RBP16.58■□□□□ 0.24
COMMD3-214ENST00000496071 FCRL4Q96PJ5 515 aa16.58■□□□□ 0.24
COMMD3-214ENST00000496071 PANX3Q96QZ0 392 aa16.58■□□□□ 0.24
COMMD3-214ENST00000496071 EFHD1Q9BUP0 239 aa16.58■□□□□ 0.24
COMMD3-214ENST00000496071 XAB2Q9HCS7 855 aaKnown RBP16.58■□□□□ 0.24
COMMD3-214ENST00000496071 SAMD15Q9P1V8 674 aa16.58■□□□□ 0.24
COMMD3-214ENST00000496071 ASF1AQ9Y294 204 aa16.58■□□□□ 0.24
COMMD3-214ENST00000496071 NEU2Q9Y3R4 380 aa16.58■□□□□ 0.24
COMMD3-214ENST00000496071 KPNA5O15131 536 aa16.57■□□□□ 0.24
COMMD3-214ENST00000496071 NDUFS3O75489 264 aa16.57■□□□□ 0.24
COMMD3-214ENST00000496071 VAPBO95292 243 aa16.57■□□□□ 0.24
COMMD3-214ENST00000496071 ZBTB11O95625 1053 aaPredicted RBP16.57■□□□□ 0.24
COMMD3-214ENST00000496071 PAMP19021 973 aa16.57■□□□□ 0.24
COMMD3-214ENST00000496071 TERF1P54274 439 aa16.57■□□□□ 0.24
COMMD3-214ENST00000496071 ABHD18Q0P651 414 aa16.57■□□□□ 0.24
COMMD3-214ENST00000496071 SRSF6Q13247 344 aaKnown RBP16.57■□□□□ 0.24
COMMD3-214ENST00000496071 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.57■□□□□ 0.24
COMMD3-214ENST00000496071 TAF1BQ53T94 588 aaPredicted RBP16.57■□□□□ 0.24
COMMD3-214ENST00000496071 TMTC4Q5T4D3 741 aa16.57■□□□□ 0.24
COMMD3-214ENST00000496071 AMIGO1Q86WK6 493 aa16.57■□□□□ 0.24
COMMD3-214ENST00000496071 PPP1R3BQ86XI6 285 aa16.57■□□□□ 0.24
COMMD3-214ENST00000496071 RASGRP3Q8IV61 690 aa16.57■□□□□ 0.24
COMMD3-214ENST00000496071 D2HGDHQ8N465 521 aa16.57■□□□□ 0.24
COMMD3-214ENST00000496071 ESX1Q8N693 406 aa16.57■□□□□ 0.24
COMMD3-214ENST00000496071 SLC39A7Q92504 469 aa16.57■□□□□ 0.24
COMMD3-214ENST00000496071 KIAA1143Q96AT1 154 aaPredicted RBP16.57■□□□□ 0.24
COMMD3-214ENST00000496071 MFSD3Q96ES6 412 aa16.57■□□□□ 0.24
COMMD3-214ENST00000496071 TCF12Q99081 682 aa16.57■□□□□ 0.24
COMMD3-214ENST00000496071 ULBP3Q9BZM4 244 aa16.57■□□□□ 0.24
COMMD3-214ENST00000496071 C1GALT1Q9NS00 363 aa16.57■□□□□ 0.24
COMMD3-214ENST00000496071 MARCH4Q9P2E8 410 aaPredicted RBP16.57■□□□□ 0.24
COMMD3-214ENST00000496071 GNPTGQ9UJJ9 305 aa16.57■□□□□ 0.24
COMMD3-214ENST00000496071 POMT2Q9UKY4 750 aa16.57■□□□□ 0.24
COMMD3-214ENST00000496071 RARRES3Q9UL19 164 aa16.57■□□□□ 0.24
COMMD3-214ENST00000496071 PCDHGA4Q9Y5G9 962 aa16.57■□□□□ 0.24
COMMD3-214ENST00000496071 SDR42E2A6NKP2 422 aa16.56■□□□□ 0.24
COMMD3-214ENST00000496071 BHMG1C9JSJ3 638 aaPredicted RBP16.56■□□□□ 0.24
COMMD3-214ENST00000496071 ZNF185O15231 689 aa16.56■□□□□ 0.24
COMMD3-214ENST00000496071 DLGAP3O95886 979 aa16.56■□□□□ 0.24
COMMD3-214ENST00000496071 APOA4P06727 396 aa16.56■□□□□ 0.24
COMMD3-214ENST00000496071 CDH3P22223 829 aa16.56■□□□□ 0.24
COMMD3-214ENST00000496071 RPS3P23396 243 aaKnown RBP eCLIP16.56■□□□□ 0.24
COMMD3-214ENST00000496071 CCR7P32248 378 aa16.56■□□□□ 0.24
COMMD3-214ENST00000496071 SHMT2P34897 504 aa16.56■□□□□ 0.24
COMMD3-214ENST00000496071 KPNA2P52292 529 aaKnown RBP16.56■□□□□ 0.24
COMMD3-214ENST00000496071 PRKG2Q13237 762 aa16.56■□□□□ 0.24
COMMD3-214ENST00000496071 TMED2Q15363 201 aa16.56■□□□□ 0.24
COMMD3-214ENST00000496071 RNF187Q5TA31 235 aaPredicted RBP16.56■□□□□ 0.24
COMMD3-214ENST00000496071 ANKRD22Q5VYY1 191 aa16.56■□□□□ 0.24
COMMD3-214ENST00000496071 PTRHD1Q6GMV3 140 aaKnown RBP16.56■□□□□ 0.24
COMMD3-214ENST00000496071 KIAA0930Q6ICG6 404 aaPredicted RBP16.56■□□□□ 0.24
COMMD3-214ENST00000496071 CASC4Q6P4E1 433 aa16.56■□□□□ 0.24
COMMD3-214ENST00000496071 TIPARPQ7Z3E1 657 aaKnown RBP16.56■□□□□ 0.24
COMMD3-214ENST00000496071 LDB1Q86U70 411 aaPredicted RBP16.56■□□□□ 0.24
COMMD3-214ENST00000496071 CAND1Q86VP6 1230 aaKnown RBP16.56■□□□□ 0.24
COMMD3-214ENST00000496071 SLC22A15Q8IZD6 547 aa16.56■□□□□ 0.24
COMMD3-214ENST00000496071 OTUD6BQ8N6M0 293 aa16.56■□□□□ 0.24
COMMD3-214ENST00000496071 OR5K2Q8NHB8 316 aa16.56■□□□□ 0.24
COMMD3-214ENST00000496071 TTC9Q92623 222 aa16.56■□□□□ 0.24
COMMD3-214ENST00000496071 HGH1Q9BTY7 390 aa16.56■□□□□ 0.24
COMMD3-214ENST00000496071 P2RY12Q9H244 342 aa16.56■□□□□ 0.24
COMMD3-214ENST00000496071 IGSF10Q6WRI0 2623 aa16.56■□□□□ 0.24
COMMD3-214ENST00000496071 CACNA1GO43497 2377 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms