RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 SLC9B1P1A6NJY1 282 aa17.49■□□□□ 0.39
HMGN1-219ENST00000491183 E7EVH7 732 aa17.49■□□□□ 0.39
HMGN1-219ENST00000491183 PYCARD-AS1I3L0S3 204 aa17.49■□□□□ 0.39
HMGN1-219ENST00000491183 SLC28A2O43868 658 aa17.49■□□□□ 0.39
HMGN1-219ENST00000491183 GOT2P00505 430 aaKnown RBP17.49■□□□□ 0.39
HMGN1-219ENST00000491183 NTRK1P04629 796 aa17.49■□□□□ 0.39
HMGN1-219ENST00000491183 GSTM1P09488 218 aa17.49■□□□□ 0.39
HMGN1-219ENST00000491183 FURINP09958 794 aa17.49■□□□□ 0.39
HMGN1-219ENST00000491183 CCNYL3P0C7X3 344 aa17.49■□□□□ 0.39
HMGN1-219ENST00000491183 ADRA1DP25100 572 aa17.49■□□□□ 0.39
HMGN1-219ENST00000491183 LMAN1P49257 510 aa17.49■□□□□ 0.39
HMGN1-219ENST00000491183 MC1RQ01726 317 aa17.49■□□□□ 0.39
HMGN1-219ENST00000491183 GSTM4Q03013 218 aa17.49■□□□□ 0.39
HMGN1-219ENST00000491183 ACVR1Q04771 509 aa17.49■□□□□ 0.39
HMGN1-219ENST00000491183 PRKG2Q13237 762 aa17.49■□□□□ 0.39
HMGN1-219ENST00000491183 KCNAB2Q13303 367 aa17.49■□□□□ 0.39
HMGN1-219ENST00000491183 GPR19Q15760 415 aa17.49■□□□□ 0.39
HMGN1-219ENST00000491183 CCNG2Q16589 344 aa17.49■□□□□ 0.39
HMGN1-219ENST00000491183 DEFB109BQ30KR1 87 aa17.49■□□□□ 0.39
HMGN1-219ENST00000491183 CYB5D1Q6P9G0 228 aa17.49■□□□□ 0.39
HMGN1-219ENST00000491183 PACS1Q6VY07 963 aa17.49■□□□□ 0.39
HMGN1-219ENST00000491183 CARFQ8N187 725 aa17.49■□□□□ 0.39
HMGN1-219ENST00000491183 CT55Q8WUE5 264 aa17.49■□□□□ 0.39
HMGN1-219ENST00000491183 ZNF501Q96CX3 271 aaPredicted RBP17.49■□□□□ 0.39
HMGN1-219ENST00000491183 FAM117AQ9C073 453 aa17.49■□□□□ 0.39
HMGN1-219ENST00000491183 TFB2MQ9H5Q4 396 aaKnown RBP17.49■□□□□ 0.39
HMGN1-219ENST00000491183 LZTFL1Q9NQ48 299 aa17.49■□□□□ 0.39
HMGN1-219ENST00000491183 LHX9Q9NQ69 397 aa17.49■□□□□ 0.39
HMGN1-219ENST00000491183 RIMKLBQ9ULI2 386 aa17.49■□□□□ 0.39
HMGN1-219ENST00000491183 BTRCQ9Y297 605 aa17.49■□□□□ 0.39
HMGN1-219ENST00000491183 BOD1L1Q8NFC6 3051 aa17.48■□□□□ 0.39
HMGN1-219ENST00000491183 BTN3A1O00481 513 aa17.48■□□□□ 0.39
HMGN1-219ENST00000491183 OR1I1O60431 355 aa17.48■□□□□ 0.39
HMGN1-219ENST00000491183 KATNA1O75449 491 aa17.48■□□□□ 0.39
HMGN1-219ENST00000491183 GAS8O95995 478 aa17.48■□□□□ 0.39
HMGN1-219ENST00000491183 MT-ND3P03897 115 aa17.48■□□□□ 0.39
HMGN1-219ENST00000491183 APRTP07741 180 aa17.48■□□□□ 0.39
HMGN1-219ENST00000491183 ACADLP28330 430 aa17.48■□□□□ 0.39
HMGN1-219ENST00000491183 PRDX3P30048 256 aaKnown RBP17.48■□□□□ 0.39
HMGN1-219ENST00000491183 TUBB4BP68371 445 aa17.48■□□□□ 0.39
HMGN1-219ENST00000491183 PRKAA1Q13131 559 aa17.48■□□□□ 0.39
HMGN1-219ENST00000491183 TUBB2AQ13885 445 aa17.48■□□□□ 0.39
HMGN1-219ENST00000491183 SEMA3AQ14563 771 aa17.48■□□□□ 0.39
HMGN1-219ENST00000491183 BRD3Q15059 726 aa17.48■□□□□ 0.39
HMGN1-219ENST00000491183 ZNF449Q6P9G9 518 aa17.48■□□□□ 0.39
HMGN1-219ENST00000491183 FAM199XQ6PEV8 388 aaPredicted RBP17.48■□□□□ 0.39
HMGN1-219ENST00000491183 NAPRTQ6XQN6 538 aa17.48■□□□□ 0.39
HMGN1-219ENST00000491183 ZNF534Q76KX8 674 aa17.48■□□□□ 0.39
HMGN1-219ENST00000491183 LRRC8AQ8IWT6 810 aa17.48■□□□□ 0.39
HMGN1-219ENST00000491183 CCDC89Q8N998 374 aa17.48■□□□□ 0.39
HMGN1-219ENST00000491183 RUFY1Q96T51 708 aa17.48■□□□□ 0.39
HMGN1-219ENST00000491183 TUBB2BQ9BVA1 445 aa17.48■□□□□ 0.39
HMGN1-219ENST00000491183 TLR10Q9BXR5 811 aa17.48■□□□□ 0.39
HMGN1-219ENST00000491183 XKR8Q9H6D3 395 aa17.48■□□□□ 0.39
HMGN1-219ENST00000491183 C1GALT1Q9NS00 363 aa17.48■□□□□ 0.39
HMGN1-219ENST00000491183 KCND1Q9NSA2 647 aa17.48■□□□□ 0.39
HMGN1-219ENST00000491183 PAK5Q9P286 719 aa17.48■□□□□ 0.39
HMGN1-219ENST00000491183 DRG1Q9Y295 367 aaKnown RBP17.48■□□□□ 0.39
HMGN1-219ENST00000491183 PCDHGA6Q9Y5G7 932 aa17.48■□□□□ 0.39
HMGN1-219ENST00000491183 SLC5A10A0PJK1 596 aa17.47■□□□□ 0.39
HMGN1-219ENST00000491183 BHMG1C9JSJ3 638 aaPredicted RBP17.47■□□□□ 0.39
HMGN1-219ENST00000491183 MATN2O00339 956 aa17.47■□□□□ 0.39
HMGN1-219ENST00000491183 QSOX1O00391 747 aa17.47■□□□□ 0.39
HMGN1-219ENST00000491183 LIN7AO14910 233 aaPredicted RBP17.47■□□□□ 0.39
HMGN1-219ENST00000491183 SUV39H1O43463 412 aa17.47■□□□□ 0.39
HMGN1-219ENST00000491183 CCDC175P0C221 793 aa17.47■□□□□ 0.39
HMGN1-219ENST00000491183 TPBGLP0DKB5 382 aa17.47■□□□□ 0.39
HMGN1-219ENST00000491183 CDH3P22223 829 aa17.47■□□□□ 0.39
HMGN1-219ENST00000491183 DNASE1L3Q13609 305 aa17.47■□□□□ 0.39
HMGN1-219ENST00000491183 LAMB3Q13751 1172 aa17.47■□□□□ 0.39
HMGN1-219ENST00000491183 ERV3-1Q14264 604 aa17.47■□□□□ 0.39
HMGN1-219ENST00000491183 DRICH1Q6PGQ1 229 aaPredicted RBP17.47■□□□□ 0.39
HMGN1-219ENST00000491183 PRICKLE2Q7Z3G6 844 aa17.47■□□□□ 0.39
HMGN1-219ENST00000491183 AMIGO1Q86WK6 493 aa17.47■□□□□ 0.39
HMGN1-219ENST00000491183 ADGRF3Q8IZF5 1079 aa17.47■□□□□ 0.39
HMGN1-219ENST00000491183 SLC38A9Q8NBW4 561 aa17.47■□□□□ 0.39
HMGN1-219ENST00000491183 OR5AR1Q8NGP9 310 aa17.47■□□□□ 0.39
HMGN1-219ENST00000491183 APOBEC4Q8WW27 367 aaKnown RBP17.47■□□□□ 0.39
HMGN1-219ENST00000491183 ELMO1Q92556 727 aa17.47■□□□□ 0.39
HMGN1-219ENST00000491183 HGH1Q9BTY7 390 aa17.47■□□□□ 0.39
HMGN1-219ENST00000491183 SOHLH2Q9NX45 425 aa17.47■□□□□ 0.39
HMGN1-219ENST00000491183 TUBD1Q9UJT1 453 aa17.47■□□□□ 0.39
HMGN1-219ENST00000491183 KCND3Q9UK17 655 aa17.47■□□□□ 0.39
HMGN1-219ENST00000491183 TCAF1Q9Y4C2 921 aa17.47■□□□□ 0.39
HMGN1-219ENST00000491183 PCDHB3Q9Y5E6 796 aa17.47■□□□□ 0.39
HMGN1-219ENST00000491183 HEMK1Q9Y5R4 338 aaPredicted RBP17.47■□□□□ 0.39
HMGN1-219ENST00000491183 SPTBP11277 2137 aa17.47■□□□□ 0.39
HMGN1-219ENST00000491183 GSAPA4D1B5 854 aa17.46■□□□□ 0.39
HMGN1-219ENST00000491183 FTH1P02794 183 aa17.46■□□□□ 0.39
HMGN1-219ENST00000491183 ST6GAL1P15907 406 aa17.46■□□□□ 0.39
HMGN1-219ENST00000491183 KCNJ1P48048 391 aa17.46■□□□□ 0.39
HMGN1-219ENST00000491183 CCZ1BP86790 482 aa17.46■□□□□ 0.39
HMGN1-219ENST00000491183 CCZ1P86791 482 aaPredicted RBP17.46■□□□□ 0.39
HMGN1-219ENST00000491183 KCTD19Q17RG1 926 aaPredicted RBP17.46■□□□□ 0.39
HMGN1-219ENST00000491183 TMTC4Q5T4D3 741 aa17.46■□□□□ 0.39
HMGN1-219ENST00000491183 PRAMEF17Q5VTA0 474 aa17.46■□□□□ 0.39
HMGN1-219ENST00000491183 LYPLAL1Q5VWZ2 237 aa17.46■□□□□ 0.39
HMGN1-219ENST00000491183 AFTPHQ6ULP2 937 aa17.46■□□□□ 0.39
HMGN1-219ENST00000491183 TMEM135Q86UB9 458 aa17.46■□□□□ 0.39
HMGN1-219ENST00000491183 OR6P1Q8NGX9 317 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms