RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 PPM1MQ96MI6 270 aa17.26■□□□□ 0.35
ITGB1-215ENST00000488494 NRTNQ99748 197 aa17.26■□□□□ 0.35
ITGB1-215ENST00000488494 MVB12BQ9H7P6 319 aa17.26■□□□□ 0.35
ITGB1-215ENST00000488494 CATSPERZQ9NTU4 200 aa17.26■□□□□ 0.35
ITGB1-215ENST00000488494 SYBUQ9NX95 663 aa17.26■□□□□ 0.35
ITGB1-215ENST00000488494 MARCH4Q9P2E8 410 aaPredicted RBP17.26■□□□□ 0.35
ITGB1-215ENST00000488494 LNPEPQ9UIQ6 1025 aa17.26■□□□□ 0.35
ITGB1-215ENST00000488494 POMT2Q9UKY4 750 aa17.26■□□□□ 0.35
ITGB1-215ENST00000488494 TCRBV7S3A2A0A539 114 aa17.25■□□□□ 0.35
ITGB1-215ENST00000488494 PGRMC1O00264 195 aaKnown RBP17.25■□□□□ 0.35
ITGB1-215ENST00000488494 BTN3A1O00481 513 aa17.25■□□□□ 0.35
ITGB1-215ENST00000488494 KIAA0754O94854 1291 aa17.25■□□□□ 0.35
ITGB1-215ENST00000488494 ITGB2P05107 769 aa17.25■□□□□ 0.35
ITGB1-215ENST00000488494 FGF5P12034 268 aa17.25■□□□□ 0.35
ITGB1-215ENST00000488494 TPSB2P20231 275 aa17.25■□□□□ 0.35
ITGB1-215ENST00000488494 MGAT1P26572 445 aa17.25■□□□□ 0.35
ITGB1-215ENST00000488494 STAT5AP42229 794 aa17.25■□□□□ 0.35
ITGB1-215ENST00000488494 HSD11B2P80365 405 aa17.25■□□□□ 0.35
ITGB1-215ENST00000488494 ABHD18Q0P651 414 aa17.25■□□□□ 0.35
ITGB1-215ENST00000488494 GPS1Q13098 491 aa17.25■□□□□ 0.35
ITGB1-215ENST00000488494 PRKAA1Q13131 559 aa17.25■□□□□ 0.35
ITGB1-215ENST00000488494 PRKG2Q13237 762 aa17.25■□□□□ 0.35
ITGB1-215ENST00000488494 MAP7Q14244 749 aa17.25■□□□□ 0.35
ITGB1-215ENST00000488494 TPSAB1Q15661 275 aa17.25■□□□□ 0.35
ITGB1-215ENST00000488494 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.25■□□□□ 0.35
ITGB1-215ENST00000488494 FBXO38Q6PIJ6 1188 aa17.25■□□□□ 0.35
ITGB1-215ENST00000488494 LDB1Q86U70 411 aaPredicted RBP17.25■□□□□ 0.35
ITGB1-215ENST00000488494 PPP1R3BQ86XI6 285 aa17.25■□□□□ 0.35
ITGB1-215ENST00000488494 REXO1L1PQ8IX06 675 aa17.25■□□□□ 0.35
ITGB1-215ENST00000488494 SLC35F6Q8N357 371 aa17.25■□□□□ 0.35
ITGB1-215ENST00000488494 ESX1Q8N693 406 aa17.25■□□□□ 0.35
ITGB1-215ENST00000488494 GALNT6Q8NCL4 622 aa17.25■□□□□ 0.35
ITGB1-215ENST00000488494 OR5AR1Q8NGP9 310 aa17.25■□□□□ 0.35
ITGB1-215ENST00000488494 LKAAEAR1Q8TD35 194 aa17.25■□□□□ 0.35
ITGB1-215ENST00000488494 STAMBPL1Q96FJ0 436 aa17.25■□□□□ 0.35
ITGB1-215ENST00000488494 SGSM3Q96HU1 749 aa17.25■□□□□ 0.35
ITGB1-215ENST00000488494 PBKQ96KB5 322 aa17.25■□□□□ 0.35
ITGB1-215ENST00000488494 SLC12A9Q9BXP2 914 aa17.25■□□□□ 0.35
ITGB1-215ENST00000488494 TRIT1Q9H3H1 467 aaKnown RBP17.25■□□□□ 0.35
ITGB1-215ENST00000488494 XKR8Q9H6D3 395 aa17.25■□□□□ 0.35
ITGB1-215ENST00000488494 PDE7BQ9NP56 450 aa17.25■□□□□ 0.35
ITGB1-215ENST00000488494 TREX1Q9NSU2 369 aa17.25■□□□□ 0.35
ITGB1-215ENST00000488494 SOHLH2Q9NX45 425 aa17.25■□□□□ 0.35
ITGB1-215ENST00000488494 BFARQ9NZS9 450 aa17.25■□□□□ 0.35
ITGB1-215ENST00000488494 RARRES3Q9UL19 164 aa17.25■□□□□ 0.35
ITGB1-215ENST00000488494 F8W8V4 182 aa17.24■□□□□ 0.35
ITGB1-215ENST00000488494 AP3B1O00203 1094 aa17.24■□□□□ 0.35
ITGB1-215ENST00000488494 MATN2O00339 956 aa17.24■□□□□ 0.35
ITGB1-215ENST00000488494 SPAG6O75602 509 aa17.24■□□□□ 0.35
ITGB1-215ENST00000488494 TIAF1O95411 115 aa17.24■□□□□ 0.35
ITGB1-215ENST00000488494 ZBTB11O95625 1053 aaPredicted RBP17.24■□□□□ 0.35
ITGB1-215ENST00000488494 NMBRP28336 390 aa17.24■□□□□ 0.35
ITGB1-215ENST00000488494 CSE1LP55060 971 aaKnown RBP17.24■□□□□ 0.35
ITGB1-215ENST00000488494 CDK16Q00536 496 aa17.24■□□□□ 0.35
ITGB1-215ENST00000488494 C19orf57Q0VDD7 668 aa17.24■□□□□ 0.35
ITGB1-215ENST00000488494 KCNJ11Q14654 390 aa17.24■□□□□ 0.35
ITGB1-215ENST00000488494 LRRC8BQ6P9F7 803 aa17.24■□□□□ 0.35
ITGB1-215ENST00000488494 C6orf15Q6UXA7 325 aaPredicted RBP17.24■□□□□ 0.35
ITGB1-215ENST00000488494 ZNF843Q8N446 348 aa17.24■□□□□ 0.35
ITGB1-215ENST00000488494 OTUD6BQ8N6M0 293 aa17.24■□□□□ 0.35
ITGB1-215ENST00000488494 COG1Q8WTW3 980 aa17.24■□□□□ 0.35
ITGB1-215ENST00000488494 MAGOHBQ96A72 148 aaKnown RBP17.24■□□□□ 0.35
ITGB1-215ENST00000488494 FGF21Q9NSA1 209 aa17.24■□□□□ 0.35
ITGB1-215ENST00000488494 IL17BQ9UHF5 180 aa17.24■□□□□ 0.35
ITGB1-215ENST00000488494 ICKQ9UPZ9 632 aa17.24■□□□□ 0.35
ITGB1-215ENST00000488494 ASF1AQ9Y294 204 aa17.24■□□□□ 0.35
ITGB1-215ENST00000488494 RPS6KL1Q9Y6S9 549 aa17.24■□□□□ 0.35
ITGB1-215ENST00000488494 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.23■□□□□ 0.35
ITGB1-215ENST00000488494 SLC5A10A0PJK1 596 aa17.23■□□□□ 0.35
ITGB1-215ENST00000488494 ZNF891A8MT65 544 aaPredicted RBP17.23■□□□□ 0.35
ITGB1-215ENST00000488494 BHMG1C9JSJ3 638 aaPredicted RBP17.23■□□□□ 0.35
ITGB1-215ENST00000488494 BTN3A3O00478 584 aa17.23■□□□□ 0.35
ITGB1-215ENST00000488494 CD3EAPO15446 510 aaKnown RBP17.23■□□□□ 0.35
ITGB1-215ENST00000488494 ZSCAN12O43309 604 aa17.23■□□□□ 0.35
ITGB1-215ENST00000488494 KRT14P02533 472 aa17.23■□□□□ 0.35
ITGB1-215ENST00000488494 FAM87AP0C7U9 286 aa17.23■□□□□ 0.35
ITGB1-215ENST00000488494 CDH3P22223 829 aa17.23■□□□□ 0.35
ITGB1-215ENST00000488494 ACADLP28330 430 aa17.23■□□□□ 0.35
ITGB1-215ENST00000488494 PPARGP37231 505 aaPredicted RBP17.23■□□□□ 0.35
ITGB1-215ENST00000488494 NPY2RP49146 381 aa17.23■□□□□ 0.35
ITGB1-215ENST00000488494 TTPAP49638 278 aa17.23■□□□□ 0.35
ITGB1-215ENST00000488494 ACY1Q03154 408 aa17.23■□□□□ 0.35
ITGB1-215ENST00000488494 GPR19Q15760 415 aa17.23■□□□□ 0.35
ITGB1-215ENST00000488494 LINC00303Q3SY05 128 aa17.23■□□□□ 0.35
ITGB1-215ENST00000488494 ANKRD22Q5VYY1 191 aa17.23■□□□□ 0.35
ITGB1-215ENST00000488494 PWWP2BQ6NUJ5 590 aa17.23■□□□□ 0.35
ITGB1-215ENST00000488494 AMIGO1Q86WK6 493 aa17.23■□□□□ 0.35
ITGB1-215ENST00000488494 CARFQ8N187 725 aa17.23■□□□□ 0.35
ITGB1-215ENST00000488494 D2HGDHQ8N465 521 aa17.23■□□□□ 0.35
ITGB1-215ENST00000488494 SLC45A3Q96JT2 553 aa17.23■□□□□ 0.35
ITGB1-215ENST00000488494 NAP1L3Q99457 506 aaPredicted RBP17.23■□□□□ 0.35
ITGB1-215ENST00000488494 ARHGAP9Q9BRR9 750 aa17.23■□□□□ 0.35
ITGB1-215ENST00000488494 TSSK1BQ9BXA7 367 aa17.23■□□□□ 0.35
ITGB1-215ENST00000488494 TFB2MQ9H5Q4 396 aaKnown RBP17.23■□□□□ 0.35
ITGB1-215ENST00000488494 TRMT1Q9NXH9 659 aaKnown RBP17.23■□□□□ 0.35
ITGB1-215ENST00000488494 ANAPC5Q9UJX4 755 aa17.23■□□□□ 0.35
ITGB1-215ENST00000488494 PIKFYVEQ9Y2I7 2098 aa17.23■□□□□ 0.35
ITGB1-215ENST00000488494 ZNF462Q96JM2 2506 aa17.22■□□□□ 0.35
ITGB1-215ENST00000488494 SLC9B1P1A6NJY1 282 aa17.22■□□□□ 0.35
ITGB1-215ENST00000488494 IQCF5A8MTL0 148 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms