RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 GPC4O75487 556 aa15.36■□□□□ 0.05
C9orf3-219ENST00000488186 SLCO2B1O94956 709 aa15.36■□□□□ 0.05
C9orf3-219ENST00000488186 RPN2P04844 631 aa15.36■□□□□ 0.05
C9orf3-219ENST00000488186 RPLP0P05388 317 aaKnown RBP15.36■□□□□ 0.05
C9orf3-219ENST00000488186 FAM153BP0C7A2 387 aa15.36■□□□□ 0.05
C9orf3-219ENST00000488186 SPRP35270 261 aaPredicted RBP15.36■□□□□ 0.05
C9orf3-219ENST00000488186 GP5P40197 560 aa15.36■□□□□ 0.05
C9orf3-219ENST00000488186 CCL7P80098 99 aa15.36■□□□□ 0.05
C9orf3-219ENST00000488186 PDAP1Q13442 181 aaKnown RBP15.36■□□□□ 0.05
C9orf3-219ENST00000488186 SPIDRQ14159 915 aa15.36■□□□□ 0.05
C9orf3-219ENST00000488186 ERCC6LQ2NKX8 1250 aa15.36■□□□□ 0.05
C9orf3-219ENST00000488186 FAM153CQ494X1 144 aa15.36■□□□□ 0.05
C9orf3-219ENST00000488186 ZNF658BQ4V348 819 aaPredicted RBP15.36■□□□□ 0.05
C9orf3-219ENST00000488186 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.36■□□□□ 0.05
C9orf3-219ENST00000488186 GRTP1Q5TC63 336 aa15.36■□□□□ 0.05
C9orf3-219ENST00000488186 SLC22A15Q8IZD6 547 aa15.36■□□□□ 0.05
C9orf3-219ENST00000488186 PHC3Q8NDX5 983 aa15.36■□□□□ 0.05
C9orf3-219ENST00000488186 UHMK1Q8TAS1 419 aaKnown RBP15.36■□□□□ 0.05
C9orf3-219ENST00000488186 ZFPM2Q8WW38 1151 aa15.36■□□□□ 0.05
C9orf3-219ENST00000488186 VPS39Q96JC1 886 aa15.36■□□□□ 0.05
C9orf3-219ENST00000488186 TRIT1Q9H3H1 467 aaKnown RBP15.36■□□□□ 0.05
C9orf3-219ENST00000488186 LRRN3Q9H3W5 708 aa15.36■□□□□ 0.05
C9orf3-219ENST00000488186 MVB12BQ9H7P6 319 aa15.36■□□□□ 0.05
C9orf3-219ENST00000488186 SLC40A1Q9NP59 571 aa15.36■□□□□ 0.05
C9orf3-219ENST00000488186 KLHL42Q9P2K6 505 aa15.36■□□□□ 0.05
C9orf3-219ENST00000488186 RABGEF1Q9UJ41 708 aa15.36■□□□□ 0.05
C9orf3-219ENST00000488186 DHRS7Q9Y394 339 aa15.36■□□□□ 0.05
C9orf3-219ENST00000488186 PSAT1Q9Y617 370 aa15.36■□□□□ 0.05
C9orf3-219ENST00000488186 PTPRBP23467 1997 aa15.36■□□□□ 0.05
C9orf3-219ENST00000488186 RP1P56715 2156 aa15.35■□□□□ 0.05
C9orf3-219ENST00000488186 MED19A0JLT2 244 aaPredicted RBP15.35■□□□□ 0.05
C9orf3-219ENST00000488186 RGS4P49798 205 aa15.35■□□□□ 0.05
C9orf3-219ENST00000488186 CLCN7P51798 805 aa15.35■□□□□ 0.05
C9orf3-219ENST00000488186 GPLD1P80108 840 aa15.35■□□□□ 0.05
C9orf3-219ENST00000488186 PRKG2Q13237 762 aa15.35■□□□□ 0.05
C9orf3-219ENST00000488186 GPR18Q14330 331 aa15.35■□□□□ 0.05
C9orf3-219ENST00000488186 KLHL38Q2WGJ6 581 aa15.35■□□□□ 0.05
C9orf3-219ENST00000488186 RBM20Q5T481 1227 aaKnown RBP15.35■□□□□ 0.05
C9orf3-219ENST00000488186 DUS1LQ6P1R4 473 aaKnown RBP15.35■□□□□ 0.05
C9orf3-219ENST00000488186 ZNF438Q7Z4V0 828 aa15.35■□□□□ 0.05
C9orf3-219ENST00000488186 SPRED1Q7Z699 444 aa15.35■□□□□ 0.05
C9orf3-219ENST00000488186 PIM3Q86V86 326 aa15.35■□□□□ 0.05
C9orf3-219ENST00000488186 ZC3HC1Q86WB0 502 aaKnown RBP15.35■□□□□ 0.05
C9orf3-219ENST00000488186 VRK3Q8IV63 474 aa15.35■□□□□ 0.05
C9orf3-219ENST00000488186 CCDC77Q9BR77 488 aa15.35■□□□□ 0.05
C9orf3-219ENST00000488186 TBC1D10AQ9BXI6 508 aa15.35■□□□□ 0.05
C9orf3-219ENST00000488186 RHOJQ9H4E5 214 aa15.35■□□□□ 0.05
C9orf3-219ENST00000488186 UCK1Q9HA47 277 aa15.35■□□□□ 0.05
C9orf3-219ENST00000488186 GALPQ9UBC7 116 aa15.35■□□□□ 0.05
C9orf3-219ENST00000488186 POLG2Q9UHN1 485 aa15.35■□□□□ 0.05
C9orf3-219ENST00000488186 TDRKHQ9Y2W6 561 aaKnown RBP15.35■□□□□ 0.05
C9orf3-219ENST00000488186 CEP295Q9C0D2 2601 aa15.34■□□□□ 0.05
C9orf3-219ENST00000488186 SPEGQ15772 3267 aa15.34■□□□□ 0.05
C9orf3-219ENST00000488186 PRAMEF33A0A0G2JMD5 474 aa15.34■□□□□ 0.05
C9orf3-219ENST00000488186 FAM95CA0A1B0GW59 222 aa15.34■□□□□ 0.05
C9orf3-219ENST00000488186 B4GAT1O43505 415 aa15.34■□□□□ 0.05
C9orf3-219ENST00000488186 DUX1O43812 170 aa15.34■□□□□ 0.05
C9orf3-219ENST00000488186 TUBBP07437 444 aa15.34■□□□□ 0.05
C9orf3-219ENST00000488186 CBSLP0DN79 551 aa15.34■□□□□ 0.05
C9orf3-219ENST00000488186 ENO3P13929 434 aaPredicted RBP15.34■□□□□ 0.05
C9orf3-219ENST00000488186 JUPP14923 745 aa15.34■□□□□ 0.05
C9orf3-219ENST00000488186 CBSP35520 551 aa15.34■□□□□ 0.05
C9orf3-219ENST00000488186 EPHA4P54764 986 aa15.34■□□□□ 0.05
C9orf3-219ENST00000488186 CDKN2DP55273 166 aa15.34■□□□□ 0.05
C9orf3-219ENST00000488186 VSNL1P62760 191 aa15.34■□□□□ 0.05
C9orf3-219ENST00000488186 FOXC1Q12948 553 aa15.34■□□□□ 0.05
C9orf3-219ENST00000488186 MAP9Q49MG5 647 aa15.34■□□□□ 0.05
C9orf3-219ENST00000488186 ACSBG2Q5FVE4 666 aa15.34■□□□□ 0.05
C9orf3-219ENST00000488186 KLHL35Q6PF15 583 aa15.34■□□□□ 0.05
C9orf3-219ENST00000488186 XKR5Q6UX68 686 aa15.34■□□□□ 0.05
C9orf3-219ENST00000488186 UNC5DQ6UXZ4 953 aa15.34■□□□□ 0.05
C9orf3-219ENST00000488186 USP53Q70EK8 1073 aa15.34■□□□□ 0.05
C9orf3-219ENST00000488186 TBC1D21Q8IYX1 336 aa15.34■□□□□ 0.05
C9orf3-219ENST00000488186 GALNT15Q8N3T1 639 aa15.34■□□□□ 0.05
C9orf3-219ENST00000488186 ACVR1CQ8NER5 493 aa15.34■□□□□ 0.05
C9orf3-219ENST00000488186 MAGEC3Q8TD91 643 aa15.34■□□□□ 0.05
C9orf3-219ENST00000488186 UBLCP1Q8WVY7 318 aaPredicted RBP15.34■□□□□ 0.05
C9orf3-219ENST00000488186 LCN9Q8WX39 176 aa15.34■□□□□ 0.05
C9orf3-219ENST00000488186 NCSTNQ92542 709 aa15.34■□□□□ 0.05
C9orf3-219ENST00000488186 TSPAN17Q96FV3 270 aa15.34■□□□□ 0.05
C9orf3-219ENST00000488186 EPB41L1Q9H4G0 881 aa15.34■□□□□ 0.05
C9orf3-219ENST00000488186 ACSS3Q9H6R3 686 aa15.34■□□□□ 0.05
C9orf3-219ENST00000488186 SLC39A10Q9ULF5 831 aa15.34■□□□□ 0.05
C9orf3-219ENST00000488186 CDYLQ9Y232 598 aa15.34■□□□□ 0.05
C9orf3-219ENST00000488186 TPRP12270 2363 aaKnown RBP15.34■□□□□ 0.05
C9orf3-219ENST00000488186 IGHV1OR21-1A0A087WYE8 117 aa15.33■□□□□ 0.04
C9orf3-219ENST00000488186 LILRA5A6NI73 299 aa15.33■□□□□ 0.04
C9orf3-219ENST00000488186 POC1B-GALNT4F8VUJ3 575 aa15.33■□□□□ 0.04
C9orf3-219ENST00000488186 UBXN7O94888 489 aa15.33■□□□□ 0.04
C9orf3-219ENST00000488186 MT-CO3P00414 261 aa15.33■□□□□ 0.04
C9orf3-219ENST00000488186 PROS1P07225 676 aa15.33■□□□□ 0.04
C9orf3-219ENST00000488186 INHBAP08476 426 aa15.33■□□□□ 0.04
C9orf3-219ENST00000488186 MYBL2P10244 700 aa15.33■□□□□ 0.04
C9orf3-219ENST00000488186 TYRP1P17643 537 aa15.33■□□□□ 0.04
C9orf3-219ENST00000488186 ACADLP28330 430 aa15.33■□□□□ 0.04
C9orf3-219ENST00000488186 ATP5DP30049 168 aa15.33■□□□□ 0.04
C9orf3-219ENST00000488186 MSH2P43246 934 aa15.33■□□□□ 0.04
C9orf3-219ENST00000488186 IL2P60568 153 aa15.33■□□□□ 0.04
C9orf3-219ENST00000488186 INSM1Q01101 510 aaPredicted RBP15.33■□□□□ 0.04
C9orf3-219ENST00000488186 POU4F1Q01851 419 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms