RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 CLN3Q13286 438 aa23.05■■□□□ 1.28
RHBDD3-205ENST00000488106 DNTTIP2Q5QJE6 756 aaKnown RBP23.05■■□□□ 1.28
RHBDD3-205ENST00000488106 ANKS6Q68DC2 871 aa23.05■■□□□ 1.28
RHBDD3-205ENST00000488106 SYDE1Q6ZW31 735 aaPredicted RBP23.05■■□□□ 1.28
RHBDD3-205ENST00000488106 PRSS42Q7Z5A4 293 aa23.05■■□□□ 1.28
RHBDD3-205ENST00000488106 PCGF5Q86SE9 256 aa23.05■■□□□ 1.28
RHBDD3-205ENST00000488106 SDCCAG8Q86SQ7 713 aaPredicted RBP23.05■■□□□ 1.28
RHBDD3-205ENST00000488106 OR4E2Q8NGC2 313 aa23.05■■□□□ 1.28
RHBDD3-205ENST00000488106 LCN9Q8WX39 176 aa23.05■■□□□ 1.28
RHBDD3-205ENST00000488106 NRTNQ99748 197 aa23.05■■□□□ 1.28
RHBDD3-205ENST00000488106 CTRCQ99895 268 aa23.05■■□□□ 1.28
RHBDD3-205ENST00000488106 DPH1Q9BZG8 443 aa23.05■■□□□ 1.28
RHBDD3-205ENST00000488106 RAB33BQ9H082 229 aa23.05■■□□□ 1.28
RHBDD3-205ENST00000488106 P2RY12Q9H244 342 aa23.05■■□□□ 1.28
RHBDD3-205ENST00000488106 MVB12BQ9H7P6 319 aa23.05■■□□□ 1.28
RHBDD3-205ENST00000488106 HRASLS2Q9NWW9 162 aa23.05■■□□□ 1.28
RHBDD3-205ENST00000488106 RNF14Q9UBS8 474 aa23.05■■□□□ 1.28
RHBDD3-205ENST00000488106 EPHA6Q9UF33 1036 aa23.05■■□□□ 1.28
RHBDD3-205ENST00000488106 ASF1AQ9Y294 204 aa23.05■■□□□ 1.28
RHBDD3-205ENST00000488106 MAGEB16A2A368 324 aa23.04■■□□□ 1.28
RHBDD3-205ENST00000488106 B4E171 279 aa23.04■■□□□ 1.28
RHBDD3-205ENST00000488106 BANF1O75531 89 aa23.04■■□□□ 1.28
RHBDD3-205ENST00000488106 F7P08709 466 aaPredicted RBP23.04■■□□□ 1.28
RHBDD3-205ENST00000488106 TSPAN7P41732 249 aa23.04■■□□□ 1.28
RHBDD3-205ENST00000488106 RAB15P59190 212 aa23.04■■□□□ 1.28
RHBDD3-205ENST00000488106 ETF1P62495 437 aaKnown RBP23.04■■□□□ 1.28
RHBDD3-205ENST00000488106 HSPA14Q0VDF9 509 aa23.04■■□□□ 1.28
RHBDD3-205ENST00000488106 TGIF1Q15583 401 aa23.04■■□□□ 1.28
RHBDD3-205ENST00000488106 TYSND1Q2T9J0 566 aa23.04■■□□□ 1.28
RHBDD3-205ENST00000488106 BROXQ5VW32 411 aa23.04■■□□□ 1.28
RHBDD3-205ENST00000488106 ZNF470Q6ECI4 717 aa23.04■■□□□ 1.28
RHBDD3-205ENST00000488106 ARMC6Q6NXE6 501 aa23.04■■□□□ 1.28
RHBDD3-205ENST00000488106 HOOK3Q86VS8 718 aa23.04■■□□□ 1.28
RHBDD3-205ENST00000488106 OR52E1Q8NGJ3 308 aa23.04■■□□□ 1.28
RHBDD3-205ENST00000488106 OR5AR1Q8NGP9 310 aa23.04■■□□□ 1.28
RHBDD3-205ENST00000488106 STAMBPL1Q96FJ0 436 aa23.04■■□□□ 1.28
RHBDD3-205ENST00000488106 SIGLEC10Q96LC7 697 aa23.04■■□□□ 1.28
RHBDD3-205ENST00000488106 KRT12Q99456 494 aa23.04■■□□□ 1.28
RHBDD3-205ENST00000488106 DDA1Q9BW61 102 aa23.04■■□□□ 1.28
RHBDD3-205ENST00000488106 CARD6Q9BX69 1037 aa23.04■■□□□ 1.28
RHBDD3-205ENST00000488106 TRIM31Q9BZY9 425 aa23.04■■□□□ 1.28
RHBDD3-205ENST00000488106 SRMSQ9H3Y6 488 aa23.04■■□□□ 1.28
RHBDD3-205ENST00000488106 ZNF768Q9H5H4 540 aaKnown RBP23.04■■□□□ 1.28
RHBDD3-205ENST00000488106 APMAPQ9HDC9 416 aa23.04■■□□□ 1.28
RHBDD3-205ENST00000488106 ACSL6Q9UKU0 697 aa23.04■■□□□ 1.28
RHBDD3-205ENST00000488106 ZCWPW2A0A1B0GU75 182 aa23.03■■□□□ 1.28
RHBDD3-205ENST00000488106 BHMG1C9JSJ3 638 aaPredicted RBP23.03■■□□□ 1.28
RHBDD3-205ENST00000488106 TOX3O15405 576 aaPredicted RBP23.03■■□□□ 1.28
RHBDD3-205ENST00000488106 LIPCP11150 499 aa23.03■■□□□ 1.28
RHBDD3-205ENST00000488106 POLR2CP19387 275 aaPredicted RBP23.03■■□□□ 1.28
RHBDD3-205ENST00000488106 OGNP20774 298 aaKnown RBP23.03■■□□□ 1.28
RHBDD3-205ENST00000488106 RPS3P23396 243 aaKnown RBP eCLIP23.03■■□□□ 1.28
RHBDD3-205ENST00000488106 IVDP26440 423 aa23.03■■□□□ 1.28
RHBDD3-205ENST00000488106 ACADLP28330 430 aa23.03■■□□□ 1.28
RHBDD3-205ENST00000488106 MC2RQ01718 297 aa23.03■■□□□ 1.28
RHBDD3-205ENST00000488106 FOXM1Q08050 763 aa23.03■■□□□ 1.28
RHBDD3-205ENST00000488106 THOC5Q13769 683 aaKnown RBP23.03■■□□□ 1.28
RHBDD3-205ENST00000488106 TMED2Q15363 201 aa23.03■■□□□ 1.28
RHBDD3-205ENST00000488106 CTSL3PQ5NE16 218 aa23.03■■□□□ 1.28
RHBDD3-205ENST00000488106 DCAF12Q5T6F0 453 aa23.03■■□□□ 1.28
RHBDD3-205ENST00000488106 RNF187Q5TA31 235 aaPredicted RBP23.03■■□□□ 1.28
RHBDD3-205ENST00000488106 NEPROQ6NW34 567 aa23.03■■□□□ 1.28
RHBDD3-205ENST00000488106 TMEM135Q86UB9 458 aa23.03■■□□□ 1.28
RHBDD3-205ENST00000488106 LRRC6Q86X45 466 aa23.03■■□□□ 1.28
RHBDD3-205ENST00000488106 CILP2Q8IUL8 1156 aa23.03■■□□□ 1.28
RHBDD3-205ENST00000488106 VRK3Q8IV63 474 aa23.03■■□□□ 1.28
RHBDD3-205ENST00000488106 ASZ1Q8WWH4 475 aa23.03■■□□□ 1.28
RHBDD3-205ENST00000488106 LPGAT1Q92604 370 aa23.03■■□□□ 1.28
RHBDD3-205ENST00000488106 PANX3Q96QZ0 392 aa23.03■■□□□ 1.28
RHBDD3-205ENST00000488106 SIDT1Q9NXL6 827 aaKnown RBP23.03■■□□□ 1.28
RHBDD3-205ENST00000488106 CRYL1Q9Y2S2 319 aa23.03■■□□□ 1.28
RHBDD3-205ENST00000488106 TDRKHQ9Y2W6 561 aaKnown RBP23.03■■□□□ 1.28
RHBDD3-205ENST00000488106 PCDHGA3Q9Y5H0 932 aa23.03■■□□□ 1.28
RHBDD3-205ENST00000488106 IGHV5-51A0A0C4DH38 117 aa23.02■■□□□ 1.28
RHBDD3-205ENST00000488106 PFDN6O15212 129 aa23.02■■□□□ 1.28
RHBDD3-205ENST00000488106 USP1O94782 785 aa23.02■■□□□ 1.28
RHBDD3-205ENST00000488106 APOA4P06727 396 aa23.02■■□□□ 1.28
RHBDD3-205ENST00000488106 FMO4P31512 558 aa23.02■■□□□ 1.28
RHBDD3-205ENST00000488106 SH3BP2P78314 561 aa23.02■■□□□ 1.28
RHBDD3-205ENST00000488106 PLOD1Q02809 727 aaPredicted RBP23.02■■□□□ 1.28
RHBDD3-205ENST00000488106 DHX9Q08211 1270 aaKnown RBP23.02■■□□□ 1.28
RHBDD3-205ENST00000488106 PRKAA1Q13131 559 aa23.02■■□□□ 1.28
RHBDD3-205ENST00000488106 SLC22A15Q8IZD6 547 aa23.02■■□□□ 1.28
RHBDD3-205ENST00000488106 FAM136AQ96C01 138 aa23.02■■□□□ 1.28
RHBDD3-205ENST00000488106 MAP3K3Q99759 626 aa23.02■■□□□ 1.28
RHBDD3-205ENST00000488106 ASPSCR1Q9BZE9 553 aa23.02■■□□□ 1.28
RHBDD3-205ENST00000488106 B3GNT4Q9C0J1 378 aa23.02■■□□□ 1.28
RHBDD3-205ENST00000488106 TRIT1Q9H3H1 467 aaKnown RBP23.02■■□□□ 1.28
RHBDD3-205ENST00000488106 XKR8Q9H6D3 395 aa23.02■■□□□ 1.28
RHBDD3-205ENST00000488106 C20orf96Q9NUD7 363 aaPredicted RBP23.02■■□□□ 1.28
RHBDD3-205ENST00000488106 CDYLQ9Y232 598 aa23.02■■□□□ 1.28
RHBDD3-205ENST00000488106 ATMQ13315 3056 aa23.01■■□□□ 1.27
RHBDD3-205ENST00000488106 GSAPA4D1B5 854 aa23.01■■□□□ 1.27
RHBDD3-205ENST00000488106 TLCD2A6NGC4 264 aa23.01■■□□□ 1.27
RHBDD3-205ENST00000488106 NIPSNAP2O75323 286 aa23.01■■□□□ 1.27
RHBDD3-205ENST00000488106 CD82P27701 267 aa23.01■■□□□ 1.27
RHBDD3-205ENST00000488106 AOAHP28039 575 aa23.01■■□□□ 1.27
RHBDD3-205ENST00000488106 CXADRP78310 365 aa23.01■■□□□ 1.27
RHBDD3-205ENST00000488106 MRPS25P82663 173 aaKnown RBP23.01■■□□□ 1.27
RHBDD3-205ENST00000488106 C2orf54Q08AI8 447 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms