RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 TMEM178BH3BS89 294 aa4.79□□□□□ -1.64
PRPF38A-203ENST00000487160 XRCC3O43542 346 aa4.79□□□□□ -1.64
PRPF38A-203ENST00000487160 TOMM70O94826 608 aa4.79□□□□□ -1.64
PRPF38A-203ENST00000487160 FCGR1AP12314 374 aa4.79□□□□□ -1.64
PRPF38A-203ENST00000487160 ITGA2P17301 1181 aa4.79□□□□□ -1.64
PRPF38A-203ENST00000487160 GNL1P36915 607 aaPredicted RBP4.79□□□□□ -1.64
PRPF38A-203ENST00000487160 AMPHP49418 695 aa4.79□□□□□ -1.64
PRPF38A-203ENST00000487160 TUBA1BP68363 451 aa4.79□□□□□ -1.64
PRPF38A-203ENST00000487160 CDK3Q00526 305 aa4.79□□□□□ -1.64
PRPF38A-203ENST00000487160 PPARDQ03181 441 aa4.79□□□□□ -1.64
PRPF38A-203ENST00000487160 RUNX1T1Q06455 604 aa4.79□□□□□ -1.64
PRPF38A-203ENST00000487160 TFCP2Q12800 502 aa4.79□□□□□ -1.64
PRPF38A-203ENST00000487160 SF3B4Q15427 424 aaKnown RBP eCLIP4.79□□□□□ -1.644e-6■■■■■ 38.6
PRPF38A-203ENST00000487160 ARMC4Q5T2S8 1044 aa4.79□□□□□ -1.64
PRPF38A-203ENST00000487160 FAM109BQ6ICB4 259 aaPredicted RBP4.79□□□□□ -1.64
PRPF38A-203ENST00000487160 GFRALQ6UXV0 394 aa4.79□□□□□ -1.64
PRPF38A-203ENST00000487160 CENPVQ7Z7K6 275 aaPredicted RBP4.79□□□□□ -1.64
PRPF38A-203ENST00000487160 TMEM219Q86XT9 240 aa4.79□□□□□ -1.64
PRPF38A-203ENST00000487160 FAM9BQ8IZU0 186 aa4.79□□□□□ -1.64
PRPF38A-203ENST00000487160 GBGT1Q8N5D6 347 aa4.79□□□□□ -1.64
PRPF38A-203ENST00000487160 IQCF1Q8N6M8 205 aa4.79□□□□□ -1.64
PRPF38A-203ENST00000487160 OR2AJ1Q8NGZ0 328 aa4.79□□□□□ -1.64
PRPF38A-203ENST00000487160 EXD1Q8NHP7 514 aa4.79□□□□□ -1.64
PRPF38A-203ENST00000487160 ELP5Q8TE02 316 aa4.79□□□□□ -1.64
PRPF38A-203ENST00000487160 NEUROG1Q92886 237 aa4.79□□□□□ -1.64
PRPF38A-203ENST00000487160 ARSGQ96EG1 525 aa4.79□□□□□ -1.64
PRPF38A-203ENST00000487160 ZNF582Q96NG8 517 aaPredicted RBP4.79□□□□□ -1.64
PRPF38A-203ENST00000487160 ABHD6Q9BV23 337 aa4.79□□□□□ -1.64
PRPF38A-203ENST00000487160 NUP85Q9BW27 656 aa4.79□□□□□ -1.64
PRPF38A-203ENST00000487160 MOV10L1Q9BXT6 1211 aaKnown RBP4.79□□□□□ -1.64
PRPF38A-203ENST00000487160 KRTAP4-11Q9BYQ6 195 aa4.79□□□□□ -1.64
PRPF38A-203ENST00000487160 EDEM3Q9BZQ6 932 aa4.79□□□□□ -1.64
PRPF38A-203ENST00000487160 TBC1D17Q9HA65 648 aa4.79□□□□□ -1.64
PRPF38A-203ENST00000487160 EQTNQ9NQ60 294 aa4.79□□□□□ -1.64
PRPF38A-203ENST00000487160 PIH1D3Q9NQM4 214 aaKnown RBP4.79□□□□□ -1.64
PRPF38A-203ENST00000487160 MBNL1Q9NR56 388 aaKnown RBP4.79□□□□□ -1.64
PRPF38A-203ENST00000487160 TCP11L1Q9NUJ3 509 aa4.79□□□□□ -1.64
PRPF38A-203ENST00000487160 PRMT7Q9NVM4 692 aaPredicted RBP4.79□□□□□ -1.64
PRPF38A-203ENST00000487160 WNT16Q9UBV4 365 aa4.79□□□□□ -1.64
PRPF38A-203ENST00000487160 IL17BQ9UHF5 180 aa4.79□□□□□ -1.64
PRPF38A-203ENST00000487160 PCDHAC2Q9Y5I4 1007 aa4.79□□□□□ -1.64
PRPF38A-203ENST00000487160 PCSK5Q92824 1860 aa4.78□□□□□ -1.64
PRPF38A-203ENST00000487160 A0A1W2PPM1 405 aa4.78□□□□□ -1.64
PRPF38A-203ENST00000487160 ANKUB1A6NFN9 424 aa4.78□□□□□ -1.64
PRPF38A-203ENST00000487160 LDB3O75112 727 aa4.78□□□□□ -1.64
PRPF38A-203ENST00000487160 CELF2O95319 508 aaKnown RBP4.78□□□□□ -1.64
PRPF38A-203ENST00000487160 BMP10O95393 424 aa4.78□□□□□ -1.64
PRPF38A-203ENST00000487160 BMP15O95972 392 aa4.78□□□□□ -1.64
PRPF38A-203ENST00000487160 SCG2P13521 617 aa4.78□□□□□ -1.64
PRPF38A-203ENST00000487160 ERCC2P18074 760 aa4.78□□□□□ -1.64
PRPF38A-203ENST00000487160 POLR2CP19387 275 aaPredicted RBP4.78□□□□□ -1.64
PRPF38A-203ENST00000487160 PTAFRP25105 342 aa4.78□□□□□ -1.64
PRPF38A-203ENST00000487160 CDKN2AP42771 156 aaKnown RBP4.78□□□□□ -1.64
PRPF38A-203ENST00000487160 CCR10P46092 362 aa4.78□□□□□ -1.64
PRPF38A-203ENST00000487160 HNRNPKP61978 463 aaKnown RBP eCLIP4.78□□□□□ -1.64
PRPF38A-203ENST00000487160 PLIN5Q00G26 463 aa4.78□□□□□ -1.64
PRPF38A-203ENST00000487160 EGR4Q05215 589 aa4.78□□□□□ -1.64
PRPF38A-203ENST00000487160 ZNF234Q14588 700 aa4.78□□□□□ -1.64
PRPF38A-203ENST00000487160 TNIP1Q15025 636 aa4.78□□□□□ -1.64
PRPF38A-203ENST00000487160 HECTD3Q5T447 861 aa4.78□□□□□ -1.64
PRPF38A-203ENST00000487160 GCNT6Q5T4J0 391 aa4.78□□□□□ -1.64
PRPF38A-203ENST00000487160 TRNP1Q6NT89 227 aa4.78□□□□□ -1.64
PRPF38A-203ENST00000487160 RBMXL3Q8N7X1 1067 aaKnown RBP4.78□□□□□ -1.64
PRPF38A-203ENST00000487160 KIF18AQ8NI77 898 aa4.78□□□□□ -1.64
PRPF38A-203ENST00000487160 CDCA5Q96FF9 252 aa4.78□□□□□ -1.64
PRPF38A-203ENST00000487160 CSTL1Q9H114 145 aa4.78□□□□□ -1.64
PRPF38A-203ENST00000487160 DPAGT1Q9H3H5 408 aa4.78□□□□□ -1.64
PRPF38A-203ENST00000487160 GAREM1Q9H706 876 aa4.78□□□□□ -1.64
PRPF38A-203ENST00000487160 HHATLQ9HCP6 504 aa4.78□□□□□ -1.64
PRPF38A-203ENST00000487160 SLC24A2Q9UI40 661 aa4.78□□□□□ -1.64
PRPF38A-203ENST00000487160 YIPF1Q9Y548 306 aa4.78□□□□□ -1.64
PRPF38A-203ENST00000487160 TMEM131LA2VDJ0 1609 aa4.78□□□□□ -1.64
PRPF38A-203ENST00000487160 XRN1Q8IZH2 1706 aaKnown RBP4.77□□□□□ -1.65
PRPF38A-203ENST00000487160 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.77□□□□□ -1.65
PRPF38A-203ENST00000487160 LAMC1P11047 1609 aa4.77□□□□□ -1.65
PRPF38A-203ENST00000487160 PRSS51A0A1B0GVH4 220 aa4.77□□□□□ -1.65
PRPF38A-203ENST00000487160 ZNHIT1O43257 154 aa4.77□□□□□ -1.65
PRPF38A-203ENST00000487160 TSPAN1O60635 241 aa4.77□□□□□ -1.65
PRPF38A-203ENST00000487160 MED24O75448 989 aa4.77□□□□□ -1.65
PRPF38A-203ENST00000487160 GCNT3O95395 438 aa4.77□□□□□ -1.65
PRPF38A-203ENST00000487160 ALPLP05186 524 aa4.77□□□□□ -1.65
PRPF38A-203ENST00000487160 OR52Z1P0C646 297 aa4.77□□□□□ -1.65
PRPF38A-203ENST00000487160 FAM106CPP0CH98 169 aa4.77□□□□□ -1.65
PRPF38A-203ENST00000487160 HLA-DOBP13765 273 aa4.77□□□□□ -1.65
PRPF38A-203ENST00000487160 IFNAR1P17181 557 aa4.77□□□□□ -1.65
PRPF38A-203ENST00000487160 ACHEP22303 614 aa4.77□□□□□ -1.65
PRPF38A-203ENST00000487160 TERF1P54274 439 aa4.77□□□□□ -1.65
PRPF38A-203ENST00000487160 SEC61A1P61619 476 aaKnown RBP4.77□□□□□ -1.65
PRPF38A-203ENST00000487160 RELQ04864 619 aaPredicted RBP4.77□□□□□ -1.65
PRPF38A-203ENST00000487160 LTBQ06643 244 aa4.77□□□□□ -1.65
PRPF38A-203ENST00000487160 PLA2G7Q13093 441 aa4.77□□□□□ -1.65
PRPF38A-203ENST00000487160 GTF2H2Q13888 395 aa4.77□□□□□ -1.65
PRPF38A-203ENST00000487160 NR1D2Q14995 579 aa4.77□□□□□ -1.65
PRPF38A-203ENST00000487160 VWC2Q2TAL6 325 aa4.77□□□□□ -1.65
PRPF38A-203ENST00000487160 KLHL26Q53HC5 615 aa4.77□□□□□ -1.65
PRPF38A-203ENST00000487160 LRCH2Q5VUJ6 765 aa4.77□□□□□ -1.65
PRPF38A-203ENST00000487160 GTF2H2CQ6P1K8 395 aa4.77□□□□□ -1.65
PRPF38A-203ENST00000487160 SUSD1Q6UWL2 747 aa4.77□□□□□ -1.65
PRPF38A-203ENST00000487160 ZNF704Q6ZNC4 412 aaPredicted RBP4.77□□□□□ -1.65
PRPF38A-203ENST00000487160 ASB18Q6ZVZ8 466 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms