RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 MVB12BQ9H7P6 319 aa21.8■■□□□ 1.08
CDHR3-212ENST00000487084 FBXO8Q9NRD0 319 aa21.8■■□□□ 1.08
CDHR3-212ENST00000487084 SIDT1Q9NXL6 827 aaKnown RBP21.8■■□□□ 1.08
CDHR3-212ENST00000487084 ASF1AQ9Y294 204 aa21.8■■□□□ 1.08
CDHR3-212ENST00000487084 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.8■■□□□ 1.08
CDHR3-212ENST00000487084 PIKFYVEQ9Y2I7 2098 aa21.79■■□□□ 1.08
CDHR3-212ENST00000487084 UBA6A0AVT1 1052 aaPredicted RBP21.79■■□□□ 1.08
CDHR3-212ENST00000487084 GSAPA4D1B5 854 aa21.79■■□□□ 1.08
CDHR3-212ENST00000487084 SDR42E2A6NKP2 422 aa21.79■■□□□ 1.08
CDHR3-212ENST00000487084 POLR2CP19387 275 aaPredicted RBP21.79■■□□□ 1.08
CDHR3-212ENST00000487084 ARL4DP49703 201 aa21.79■■□□□ 1.08
CDHR3-212ENST00000487084 VAC14Q08AM6 782 aa21.79■■□□□ 1.08
CDHR3-212ENST00000487084 KIAA0930Q6ICG6 404 aaPredicted RBP21.79■■□□□ 1.08
CDHR3-212ENST00000487084 MRNIPQ6NTE8 343 aa21.79■■□□□ 1.08
CDHR3-212ENST00000487084 SDCCAG8Q86SQ7 713 aaPredicted RBP21.79■■□□□ 1.08
CDHR3-212ENST00000487084 KLHL7Q8IXQ5 586 aa21.79■■□□□ 1.08
CDHR3-212ENST00000487084 KRT222Q8N1A0 295 aa21.79■■□□□ 1.08
CDHR3-212ENST00000487084 OR52E1Q8NGJ3 308 aa21.79■■□□□ 1.08
CDHR3-212ENST00000487084 ZNF669Q96BR6 464 aaPredicted RBP21.79■■□□□ 1.08
CDHR3-212ENST00000487084 RNF31Q96EP0 1072 aa21.79■■□□□ 1.08
CDHR3-212ENST00000487084 ELMO2Q96JJ3 720 aa21.79■■□□□ 1.08
CDHR3-212ENST00000487084 GNPTGQ9UJJ9 305 aa21.79■■□□□ 1.08
CDHR3-212ENST00000487084 IGHV5-51A0A0C4DH38 117 aa21.78■■□□□ 1.08
CDHR3-212ENST00000487084 SLC5A10A0PJK1 596 aa21.78■■□□□ 1.08
CDHR3-212ENST00000487084 CCR7P32248 378 aa21.78■■□□□ 1.08
CDHR3-212ENST00000487084 ATP1A2P50993 1020 aa21.78■■□□□ 1.08
CDHR3-212ENST00000487084 EIF3BP55884 814 aaKnown RBP21.78■■□□□ 1.08
CDHR3-212ENST00000487084 PLOD1Q02809 727 aaPredicted RBP21.78■■□□□ 1.08
CDHR3-212ENST00000487084 HSPA14Q0VDF9 509 aa21.78■■□□□ 1.08
CDHR3-212ENST00000487084 DHX34Q14147 1143 aaKnown RBP21.78■■□□□ 1.08
CDHR3-212ENST00000487084 DTX1Q86Y01 620 aa21.78■■□□□ 1.08
CDHR3-212ENST00000487084 CREG2Q8IUH2 290 aa21.78■■□□□ 1.08
CDHR3-212ENST00000487084 NAT8LQ8N9F0 302 aa21.78■■□□□ 1.08
CDHR3-212ENST00000487084 OR5AR1Q8NGP9 310 aa21.78■■□□□ 1.08
CDHR3-212ENST00000487084 KLHL6Q8WZ60 621 aa21.78■■□□□ 1.08
CDHR3-212ENST00000487084 UBXN4Q92575 508 aa21.78■■□□□ 1.08
CDHR3-212ENST00000487084 OR6C1Q96RD1 312 aa21.78■■□□□ 1.08
CDHR3-212ENST00000487084 NRTNQ99748 197 aa21.78■■□□□ 1.08
CDHR3-212ENST00000487084 ZPBPQ9BS86 351 aa21.78■■□□□ 1.08
CDHR3-212ENST00000487084 XKR8Q9H6D3 395 aa21.78■■□□□ 1.08
CDHR3-212ENST00000487084 IL1RAPL1Q9NZN1 696 aa21.78■■□□□ 1.08
CDHR3-212ENST00000487084 MAD1L1Q9Y6D9 718 aa21.78■■□□□ 1.08
CDHR3-212ENST00000487084 TLCD2A6NGC4 264 aa21.77■■□□□ 1.08
CDHR3-212ENST00000487084 IQCJ-SCHIP1C9J366 451 aaPredicted RBP21.77■■□□□ 1.08
CDHR3-212ENST00000487084 PAFAH1B1P43034 410 aa21.77■■□□□ 1.08
CDHR3-212ENST00000487084 PTK6Q13882 451 aa21.77■■□□□ 1.08
CDHR3-212ENST00000487084 TMED2Q15363 201 aa21.77■■□□□ 1.08
CDHR3-212ENST00000487084 RNASEH2BQ5TBB1 312 aaKnown RBP21.77■■□□□ 1.08
CDHR3-212ENST00000487084 C17orf53Q8N3J3 647 aaPredicted RBP21.77■■□□□ 1.08
CDHR3-212ENST00000487084 IL22RA1Q8N6P7 574 aa21.77■■□□□ 1.08
CDHR3-212ENST00000487084 SIDT2Q8NBJ9 832 aaKnown RBP21.77■■□□□ 1.08
CDHR3-212ENST00000487084 CD180Q99467 661 aa21.77■■□□□ 1.08
CDHR3-212ENST00000487084 CARD6Q9BX69 1037 aa21.77■■□□□ 1.08
CDHR3-212ENST00000487084 TRIT1Q9H3H1 467 aaKnown RBP21.77■■□□□ 1.08
CDHR3-212ENST00000487084 PCYOX1Q9UHG3 505 aa21.77■■□□□ 1.08
CDHR3-212ENST00000487084 SSUH2Q9Y2M2 353 aa21.77■■□□□ 1.08
CDHR3-212ENST00000487084 TDRKHQ9Y2W6 561 aaKnown RBP21.77■■□□□ 1.08
CDHR3-212ENST00000487084 RPS6KL1Q9Y6S9 549 aa21.77■■□□□ 1.08
CDHR3-212ENST00000487084 FAM237BA0A1B0GVD1 139 aa21.76■■□□□ 1.07
CDHR3-212ENST00000487084 MAGEB16A2A368 324 aa21.76■■□□□ 1.07
CDHR3-212ENST00000487084 BHMG1C9JSJ3 638 aaPredicted RBP21.76■■□□□ 1.07
CDHR3-212ENST00000487084 DNALI1O14645 258 aaPredicted RBP21.76■■□□□ 1.07
CDHR3-212ENST00000487084 PFDN6O15212 129 aa21.76■■□□□ 1.07
CDHR3-212ENST00000487084 RAD1O60671 282 aa21.76■■□□□ 1.07
CDHR3-212ENST00000487084 APOA4P06727 396 aa21.76■■□□□ 1.07
CDHR3-212ENST00000487084 NELFEP18615 380 aaKnown RBP21.76■■□□□ 1.07
CDHR3-212ENST00000487084 ACADLP28330 430 aa21.76■■□□□ 1.07
CDHR3-212ENST00000487084 KPNA2P52292 529 aaKnown RBP21.76■■□□□ 1.07
CDHR3-212ENST00000487084 KCNAB1Q14722 419 aa21.76■■□□□ 1.07
CDHR3-212ENST00000487084 ANKRD20A4Q4UJ75 823 aa21.76■■□□□ 1.07
CDHR3-212ENST00000487084 SDK2Q58EX2 2172 aa21.76■■□□□ 1.07
CDHR3-212ENST00000487084 ARMC3Q5W041 872 aa21.76■■□□□ 1.07
CDHR3-212ENST00000487084 LRRC6Q86X45 466 aa21.76■■□□□ 1.07
CDHR3-212ENST00000487084 RASGRP3Q8IV61 690 aa21.76■■□□□ 1.07
CDHR3-212ENST00000487084 CACNA2D3Q8IZS8 1091 aa21.76■■□□□ 1.07
CDHR3-212ENST00000487084 ASZ1Q8WWH4 475 aa21.76■■□□□ 1.07
CDHR3-212ENST00000487084 PANX3Q96QZ0 392 aa21.76■■□□□ 1.07
CDHR3-212ENST00000487084 P2RY12Q9H244 342 aa21.76■■□□□ 1.07
CDHR3-212ENST00000487084 TFB2MQ9H5Q4 396 aaKnown RBP21.76■■□□□ 1.07
CDHR3-212ENST00000487084 K7ENP7 123 aa21.75■■□□□ 1.07
CDHR3-212ENST00000487084 BTN3A3O00478 584 aa21.75■■□□□ 1.07
CDHR3-212ENST00000487084 BTN3A1O00481 513 aa21.75■■□□□ 1.07
CDHR3-212ENST00000487084 STK17BO94768 372 aa21.75■■□□□ 1.07
CDHR3-212ENST00000487084 CDH3P22223 829 aa21.75■■□□□ 1.07
CDHR3-212ENST00000487084 RPS3P23396 243 aaKnown RBP eCLIP21.75■■□□□ 1.07
CDHR3-212ENST00000487084 FMO4P31512 558 aa21.75■■□□□ 1.07
CDHR3-212ENST00000487084 DR1Q01658 176 aa21.75■■□□□ 1.07
CDHR3-212ENST00000487084 THOC5Q13769 683 aaKnown RBP21.75■■□□□ 1.07
CDHR3-212ENST00000487084 RNF187Q5TA31 235 aaPredicted RBP21.75■■□□□ 1.07
CDHR3-212ENST00000487084 IZUMO3Q5VZ72 239 aa21.75■■□□□ 1.07
CDHR3-212ENST00000487084 NEPROQ6NW34 567 aa21.75■■□□□ 1.07
CDHR3-212ENST00000487084 INO80CQ6PI98 192 aaPredicted RBP21.75■■□□□ 1.07
CDHR3-212ENST00000487084 FBXO38Q6PIJ6 1188 aa21.75■■□□□ 1.07
CDHR3-212ENST00000487084 AMIGO1Q86WK6 493 aa21.75■■□□□ 1.07
CDHR3-212ENST00000487084 VRK3Q8IV63 474 aa21.75■■□□□ 1.07
CDHR3-212ENST00000487084 CFAP61Q8NHU2 1237 aa21.75■■□□□ 1.07
CDHR3-212ENST00000487084 GSDMBQ8TAX9 411 aa21.75■■□□□ 1.07
CDHR3-212ENST00000487084 SLCO2A1Q92959 643 aa21.75■■□□□ 1.07
CDHR3-212ENST00000487084 NKD1Q969G9 470 aa21.75■■□□□ 1.07
CDHR3-212ENST00000487084 SLC41A2Q96JW4 573 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms