RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 PIGOQ8TEQ8 1089 aa3.98□□□□□ -1.77
PTCD3-216ENST00000487043 DEPDC1BQ8WUY9 529 aa3.98□□□□□ -1.77
PTCD3-216ENST00000487043 INPP5DQ92835 1189 aa3.98□□□□□ -1.77
PTCD3-216ENST00000487043 ORAI1Q96D31 301 aa3.98□□□□□ -1.77
PTCD3-216ENST00000487043 HDAC11Q96DB2 347 aa3.98□□□□□ -1.77
PTCD3-216ENST00000487043 GRAMD2BQ96HH9 432 aa3.98□□□□□ -1.77
PTCD3-216ENST00000487043 FNBP1Q96RU3 617 aa3.98□□□□□ -1.77
PTCD3-216ENST00000487043 CITED2Q99967 270 aaPredicted RBP3.98□□□□□ -1.77
PTCD3-216ENST00000487043 GPATCH1Q9BRR8 931 aaKnown RBP3.98□□□□□ -1.77
PTCD3-216ENST00000487043 NUP85Q9BW27 656 aa3.98□□□□□ -1.77
PTCD3-216ENST00000487043 GPR88Q9GZN0 384 aa3.98□□□□□ -1.77
PTCD3-216ENST00000487043 FAM234AQ9H0X4 552 aa3.98□□□□□ -1.77
PTCD3-216ENST00000487043 PPIL3Q9H2H8 161 aaKnown RBP3.98□□□□□ -1.77
PTCD3-216ENST00000487043 MAGIXQ9H6Y5 334 aa3.98□□□□□ -1.77
PTCD3-216ENST00000487043 XAB2Q9HCS7 855 aaKnown RBP3.98□□□□□ -1.77
PTCD3-216ENST00000487043 MMP25Q9NPA2 562 aa3.98□□□□□ -1.77
PTCD3-216ENST00000487043 CNGB3Q9NQW8 809 aa3.98□□□□□ -1.77
PTCD3-216ENST00000487043 RAI14Q9P0K7 980 aa3.98□□□□□ -1.77
PTCD3-216ENST00000487043 UBA2Q9UBT2 640 aaPredicted RBP3.98□□□□□ -1.77
PTCD3-216ENST00000487043 CDC14AQ9UNH5 594 aa3.98□□□□□ -1.77
PTCD3-216ENST00000487043 BTBD3Q9Y2F9 522 aa3.98□□□□□ -1.77
PTCD3-216ENST00000487043 WBP11Q9Y2W2 641 aaKnown RBP3.98□□□□□ -1.77
PTCD3-216ENST00000487043 PAM16Q9Y3D7 125 aa3.98□□□□□ -1.77
PTCD3-216ENST00000487043 RAI2Q9Y5P3 530 aa3.98□□□□□ -1.77
PTCD3-216ENST00000487043 DLEC1Q9Y238 1755 aa3.98□□□□□ -1.77
PTCD3-216ENST00000487043 DOCK2Q92608 1830 aa3.98□□□□□ -1.77
PTCD3-216ENST00000487043 MYO5AQ9Y4I1 1855 aaKnown RBP3.97□□□□□ -1.77
PTCD3-216ENST00000487043 TRAV34A0A0B4J273 112 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 WIPF3A6NGB9 483 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 MS4A18H0YCH9 400 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 I6L893 689 aaPredicted RBP3.97□□□□□ -1.77
PTCD3-216ENST00000487043 TIMM23O14925 209 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 SLC7A4O43246 635 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 GPAA1O43292 621 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 HSPA12AO43301 675 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 ZIC3O60481 467 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 CNOT3O75175 753 aaKnown RBP3.97□□□□□ -1.77
PTCD3-216ENST00000487043 PENKP01210 267 aaPredicted RBP3.97□□□□□ -1.77
PTCD3-216ENST00000487043 HSPD1P10809 573 aaKnown RBP3.97□□□□□ -1.77
PTCD3-216ENST00000487043 DDX5P17844 614 aaKnown RBP3.97□□□□□ -1.77
PTCD3-216ENST00000487043 NMBRP28336 390 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 CD38P28907 300 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 HNRNPH1P31943 449 aaKnown RBP3.97□□□□□ -1.77
PTCD3-216ENST00000487043 ME1P48163 572 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 NPY4RP50391 375 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 POLGP54098 1239 aaPredicted RBP3.97□□□□□ -1.77
PTCD3-216ENST00000487043 C21orf58P58505 322 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 FKBP1AP62942 108 aaKnown RBP3.97□□□□□ -1.77
PTCD3-216ENST00000487043 CSNK2A1P68400 391 aaPredicted RBP3.97□□□□□ -1.77
PTCD3-216ENST00000487043 SIRPAP78324 504 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 GSTO1P78417 241 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 ADORA2A-AS1P86434 159 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 MECOMQ03112 1051 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 CTTNQ14247 550 aaKnown RBP3.97□□□□□ -1.77
PTCD3-216ENST00000487043 RABEP1Q15276 862 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 ALX1Q15699 326 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 HYAL4Q2M3T9 481 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 MYLK3Q32MK0 819 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 Q4G0T1 1027 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 DCST1Q5T197 706 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 ARMC4Q5T2S8 1044 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 TEX38Q6PEX7 206 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 SLC36A4Q6YBV0 504 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 Q6ZSV7 163 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 ERN2Q76MJ5 926 aaKnown RBP3.97□□□□□ -1.77
PTCD3-216ENST00000487043 ZNF367Q7RTV3 350 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 TRAPPC11Q7Z392 1133 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 PRIMA1Q86XR5 153 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 RASGEF1CQ8N431 466 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 ZNF713Q8N859 430 aaPredicted RBP3.97□□□□□ -1.77
PTCD3-216ENST00000487043 CSNK2A3Q8NEV1 391 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 OR10S1Q8NGN2 331 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 LPAR1Q92633 364 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 RND1Q92730 232 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 SNX21Q969T3 373 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 SPAG5Q96R06 1193 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 SMC6Q96SB8 1091 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 SH3GL2Q99962 352 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 RIOK1Q9BRS2 568 aaKnown RBP3.97□□□□□ -1.77
PTCD3-216ENST00000487043 HAUS8Q9BT25 410 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 HGH1Q9BTY7 390 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 SEMA4CQ9C0C4 833 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 PRSS22Q9GZN4 317 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 RAD21L1Q9H4I0 556 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 CATSPERBQ9H7T0 1116 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 CNOT10Q9H9A5 744 aaKnown RBP3.97□□□□□ -1.77
PTCD3-216ENST00000487043 FZD3Q9NPG1 666 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 SIRT3Q9NTG7 399 aaPredicted RBP3.97□□□□□ -1.77
PTCD3-216ENST00000487043 FLRT1Q9NZU1 646 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 DDX25Q9UHL0 483 aaKnown RBP3.97□□□□□ -1.77
PTCD3-216ENST00000487043 CTNNA3Q9UI47 895 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 POMT1Q9Y6A1 747 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 ZFP37Q9Y6Q3 630 aaPredicted RBP3.97□□□□□ -1.77
PTCD3-216ENST00000487043 KIAA1551Q9HCM1 1747 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 RPAP1Q9BWH6 1393 aaPredicted RBP3.97□□□□□ -1.77
PTCD3-216ENST00000487043 ZMYM2Q9UBW7 1377 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 COL1A1P02452 1464 aaPredicted RBP3.97□□□□□ -1.77
PTCD3-216ENST00000487043 MYH7P12883 1935 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 DUOX1Q9NRD9 1551 aa3.97□□□□□ -1.77
PTCD3-216ENST00000487043 CACNA1SQ13698 1873 aa3.96□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms