RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 SLC28A2O43868 658 aa9.24□□□□□ -0.93
TMEM39A-208ENST00000486159 CPNE6O95741 557 aa9.24□□□□□ -0.93
TMEM39A-208ENST00000486159 TRBC1P01850 177 aa9.24□□□□□ -0.93
TMEM39A-208ENST00000486159 HLA-DQB2P05538 268 aa9.24□□□□□ -0.93
TMEM39A-208ENST00000486159 MMP2P08253 660 aa9.24□□□□□ -0.93
TMEM39A-208ENST00000486159 LIPCP11150 499 aa9.24□□□□□ -0.93
TMEM39A-208ENST00000486159 CYP2A6P11509 494 aaPredicted RBP9.24□□□□□ -0.93
TMEM39A-208ENST00000486159 KRT4P19013 534 aa9.24□□□□□ -0.93
TMEM39A-208ENST00000486159 CA4P22748 312 aa9.24□□□□□ -0.93
TMEM39A-208ENST00000486159 KELP23276 732 aa9.24□□□□□ -0.93
TMEM39A-208ENST00000486159 GRIA1P42261 906 aa9.24□□□□□ -0.93
TMEM39A-208ENST00000486159 SESN2P58004 480 aaPredicted RBP9.24□□□□□ -0.93
TMEM39A-208ENST00000486159 ILF3Q12906 894 aaKnown RBP eCLIP9.24□□□□□ -0.93
TMEM39A-208ENST00000486159 EIF3IQ13347 325 aaKnown RBP9.24□□□□□ -0.93
TMEM39A-208ENST00000486159 NR1D2Q14995 579 aa9.24□□□□□ -0.93
TMEM39A-208ENST00000486159 DBN1Q16643 649 aa9.24□□□□□ -0.93
TMEM39A-208ENST00000486159 TBR1Q16650 682 aa9.24□□□□□ -0.93
TMEM39A-208ENST00000486159 PYCR3Q53H96 274 aa9.24□□□□□ -0.93
TMEM39A-208ENST00000486159 PCID2Q5JVF3 399 aa9.24□□□□□ -0.93
TMEM39A-208ENST00000486159 SNAP47Q5SQN1 464 aa9.24□□□□□ -0.93
TMEM39A-208ENST00000486159 MANEAQ5SRI9 462 aa9.24□□□□□ -0.93
TMEM39A-208ENST00000486159 GRTP1Q5TC63 336 aa9.24□□□□□ -0.93
TMEM39A-208ENST00000486159 HHATQ5VTY9 493 aa9.24□□□□□ -0.93
TMEM39A-208ENST00000486159 TRIM42Q8IWZ5 723 aa9.24□□□□□ -0.93
TMEM39A-208ENST00000486159 ANKS4BQ8N8V4 417 aa9.24□□□□□ -0.93
TMEM39A-208ENST00000486159 BANPQ8N9N5 519 aa9.24□□□□□ -0.93
TMEM39A-208ENST00000486159 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.24□□□□□ -0.93
TMEM39A-208ENST00000486159 OR52K1Q8NGK4 314 aa9.24□□□□□ -0.93
TMEM39A-208ENST00000486159 SLC37A2Q8TED4 501 aa9.24□□□□□ -0.93
TMEM39A-208ENST00000486159 SGF29Q96ES7 293 aa9.24□□□□□ -0.93
TMEM39A-208ENST00000486159 IMP4Q96G21 291 aaKnown RBP9.24□□□□□ -0.93
TMEM39A-208ENST00000486159 SCARF2Q96GP6 870 aaPredicted RBP9.24□□□□□ -0.93
TMEM39A-208ENST00000486159 APOPT1Q96IL0 206 aa9.24□□□□□ -0.93
TMEM39A-208ENST00000486159 CMKLR1Q99788 373 aa9.24□□□□□ -0.93
TMEM39A-208ENST00000486159 CPNE1Q99829 537 aa9.24□□□□□ -0.93
TMEM39A-208ENST00000486159 TBL1YQ9BQ87 522 aa9.24□□□□□ -0.93
TMEM39A-208ENST00000486159 GORASP1Q9BQQ3 440 aa9.24□□□□□ -0.93
TMEM39A-208ENST00000486159 KIFC1Q9BW19 673 aa9.24□□□□□ -0.93
TMEM39A-208ENST00000486159 GSDMCQ9BYG8 508 aa9.24□□□□□ -0.93
TMEM39A-208ENST00000486159 CEP41Q9BYV8 373 aa9.24□□□□□ -0.93
TMEM39A-208ENST00000486159 VPS11Q9H270 941 aa9.24□□□□□ -0.93
TMEM39A-208ENST00000486159 PLAC1Q9HBJ0 212 aa9.24□□□□□ -0.93
TMEM39A-208ENST00000486159 TRNAU1APQ9NX07 287 aaKnown RBP9.24□□□□□ -0.93
TMEM39A-208ENST00000486159 TXNDC16Q9P2K2 825 aa9.24□□□□□ -0.93
TMEM39A-208ENST00000486159 ACSL6Q9UKU0 697 aa9.24□□□□□ -0.93
TMEM39A-208ENST00000486159 SRPK3Q9UPE1 567 aa9.24□□□□□ -0.93
TMEM39A-208ENST00000486159 B3GALT1Q9Y5Z6 326 aa9.24□□□□□ -0.93
TMEM39A-208ENST00000486159 ERICH4A6NGS2 130 aa9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 FADS2P1A8MWK0 482 aa9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 TMX2-CTNND1H3BSU7 103 aa9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 DNAJC6O75061 913 aa9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 ASMTLO95671 621 aa9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 EPOP01588 193 aa9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 PIRTP0C851 137 aa9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 PAMP19021 973 aa9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 DRD4P21917 467 aa9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 ADRA1AP35348 466 aa9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 GP5P40197 560 aa9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 CCNFP41002 786 aa9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 STC1P52823 247 aa9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 LIMK2P53671 638 aa9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 SEC24CP53992 1094 aa9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 CSE1LP55060 971 aaKnown RBP9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 DPTQ07507 201 aa9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 EFTUD2Q15029 972 aaKnown RBP eCLIP9.23□□□□□ -0.933e-6■■■□□ 17.8
TMEM39A-208ENST00000486159 PDK4Q16654 411 aa9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 ANKRD20A4Q4UJ75 823 aa9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 COLEC12Q5KU26 742 aa9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 PDPK2PQ6A1A2 396 aa9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 RANBP10Q6VN20 620 aa9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 NLRP9Q7RTR0 991 aa9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 PRICKLE2Q7Z3G6 844 aa9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 KDELC2Q7Z4H8 507 aa9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 YTHDF3Q7Z739 585 aaKnown RBP9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 SPNS2Q8IVW8 549 aa9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 CACNA2D3Q8IZS8 1091 aa9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 MPP5Q8N3R9 675 aa9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 ANKRD42Q8N9B4 389 aa9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 PPHLN1Q8NEY8 458 aaKnown RBP9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 LPCAT1Q8NF37 534 aa9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 PEX13Q92968 403 aa9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 NKD1Q969G9 470 aa9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 TADA1Q96BN2 335 aa9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 CERS2Q96G23 380 aa9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 OXNAD1Q96HP4 312 aaPredicted RBP9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 COX14Q96I36 57 aa9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 CABS1Q96KC9 395 aa9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 OR2M4Q96R27 311 aa9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 RANBP9Q96S59 729 aa9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 CTRCQ99895 268 aa9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 FSD1LQ9BXM9 530 aa9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 TDRD1Q9BXT4 1180 aaKnown RBP9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 IQCGQ9H095 443 aaKnown RBP9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 SYBUQ9NX95 663 aa9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 TBC1D29Q9UFV1 150 aa9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 ZNHIT2Q9UHR6 403 aa9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 KCNK6Q9Y257 313 aa9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 RPS6KL1Q9Y6S9 549 aa9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 TEX15Q9BXT5 2789 aa9.23□□□□□ -0.93
TMEM39A-208ENST00000486159 A0A1W2PPM1 405 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms