RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 UBA1P22314 1058 aaKnown RBP4.39□□□□□ -1.71
SMARCC1-207ENST00000485833 UBA7P41226 1012 aa4.39□□□□□ -1.71
SMARCC1-207ENST00000485833 MMP14P50281 582 aa4.39□□□□□ -1.71
SMARCC1-207ENST00000485833 RARSP54136 660 aaKnown RBP4.39□□□□□ -1.71
SMARCC1-207ENST00000485833 DCTN2Q13561 401 aaKnown RBP4.39□□□□□ -1.71
SMARCC1-207ENST00000485833 CCDC6Q16204 474 aa4.39□□□□□ -1.71
SMARCC1-207ENST00000485833 CCL14Q16627 93 aa4.39□□□□□ -1.71
SMARCC1-207ENST00000485833 CEP85LQ5SZL2 805 aa4.39□□□□□ -1.71
SMARCC1-207ENST00000485833 ZNF704Q6ZNC4 412 aaPredicted RBP4.39□□□□□ -1.71
SMARCC1-207ENST00000485833 SMC5Q8IY18 1101 aa4.39□□□□□ -1.71
SMARCC1-207ENST00000485833 PARK7Q99497 189 aaKnown RBP4.39□□□□□ -1.71
SMARCC1-207ENST00000485833 PIP5K1AQ99755 562 aa4.39□□□□□ -1.71
SMARCC1-207ENST00000485833 POLR3CQ9BUI4 534 aaPredicted RBP4.39□□□□□ -1.71
SMARCC1-207ENST00000485833 USP44Q9H0E7 712 aa4.39□□□□□ -1.71
SMARCC1-207ENST00000485833 UBN1Q9NPG3 1134 aa4.39□□□□□ -1.71
SMARCC1-207ENST00000485833 FBXL2Q9UKC9 423 aa4.39□□□□□ -1.71
SMARCC1-207ENST00000485833 FAF1Q9UNN5 650 aaPredicted RBP4.39□□□□□ -1.71
SMARCC1-207ENST00000485833 KMT2BQ9UMN6 2715 aaPredicted RBP4.39□□□□□ -1.71
SMARCC1-207ENST00000485833 ZFHX4Q86UP3 3567 aa4.39□□□□□ -1.71
SMARCC1-207ENST00000485833 NCOR2Q9Y618 2525 aa4.38□□□□□ -1.71
SMARCC1-207ENST00000485833 HS3ST1O14792 307 aa4.38□□□□□ -1.71
SMARCC1-207ENST00000485833 EDIL3O43854 480 aa4.38□□□□□ -1.71
SMARCC1-207ENST00000485833 PAGE4O60829 102 aa4.38□□□□□ -1.71
SMARCC1-207ENST00000485833 CGAP01215 116 aa4.38□□□□□ -1.71
SMARCC1-207ENST00000485833 IGKV5-2P06315 115 aa4.38□□□□□ -1.71
SMARCC1-207ENST00000485833 PRSS1P07477 247 aa4.38□□□□□ -1.71
SMARCC1-207ENST00000485833 UBL4AP11441 157 aa4.38□□□□□ -1.71
SMARCC1-207ENST00000485833 FGF5P12034 268 aa4.38□□□□□ -1.71
SMARCC1-207ENST00000485833 CYP2B6P20813 491 aa4.38□□□□□ -1.71
SMARCC1-207ENST00000485833 CLDN20P56880 219 aa4.38□□□□□ -1.71
SMARCC1-207ENST00000485833 LINC01547P58512 204 aaPredicted RBP4.38□□□□□ -1.71
SMARCC1-207ENST00000485833 HILS1P60008 231 aa4.38□□□□□ -1.71
SMARCC1-207ENST00000485833 GAGE5Q13069 117 aa4.38□□□□□ -1.71
SMARCC1-207ENST00000485833 GAGE6Q13070 117 aa4.38□□□□□ -1.71
SMARCC1-207ENST00000485833 TBX2Q13207 712 aaPredicted RBP4.38□□□□□ -1.71
SMARCC1-207ENST00000485833 MAD2L1Q13257 205 aaPredicted RBP4.38□□□□□ -1.71
SMARCC1-207ENST00000485833 MYLK3Q32MK0 819 aa4.38□□□□□ -1.71
SMARCC1-207ENST00000485833 CCNYL2Q5T2Q4 361 aa4.38□□□□□ -1.71
SMARCC1-207ENST00000485833 C18orf63Q68DL7 685 aa4.38□□□□□ -1.71
SMARCC1-207ENST00000485833 OR7E24Q6IFN5 339 aa4.38□□□□□ -1.71
SMARCC1-207ENST00000485833 EPHX4Q8IUS5 362 aa4.38□□□□□ -1.71
SMARCC1-207ENST00000485833 OR14L1PQ8NHC6 308 aa4.38□□□□□ -1.71
SMARCC1-207ENST00000485833 METTL6Q8TCB7 284 aa4.38□□□□□ -1.71
SMARCC1-207ENST00000485833 WBP2Q969T9 261 aa4.38□□□□□ -1.71
SMARCC1-207ENST00000485833 MMABQ96EY8 250 aaPredicted RBP4.38□□□□□ -1.71
SMARCC1-207ENST00000485833 TBATAQ96M53 351 aa4.38□□□□□ -1.71
SMARCC1-207ENST00000485833 C1QTNF1Q9BXJ1 281 aa4.38□□□□□ -1.71
SMARCC1-207ENST00000485833 SCPEP1Q9HB40 452 aa4.38□□□□□ -1.71
SMARCC1-207ENST00000485833 CACNA1HO95180 2353 aa4.38□□□□□ -1.71
SMARCC1-207ENST00000485833 CFAP47Q6ZTR5 3102 aa4.37□□□□□ -1.71
SMARCC1-207ENST00000485833 ATAD5Q96QE3 1844 aa4.37□□□□□ -1.71
SMARCC1-207ENST00000485833 MYO15AQ9UKN7 3530 aa4.37□□□□□ -1.71
SMARCC1-207ENST00000485833 ZCWPW2A0A1B0GU75 182 aa4.37□□□□□ -1.71
SMARCC1-207ENST00000485833 CTAGE9A4FU28 777 aa4.37□□□□□ -1.71
SMARCC1-207ENST00000485833 NPIPB15A6NHN6 443 aaPredicted RBP4.37□□□□□ -1.71
SMARCC1-207ENST00000485833 M0QZ24 198 aa4.37□□□□□ -1.71
SMARCC1-207ENST00000485833 TGFB1I1O43294 461 aa4.37□□□□□ -1.71
SMARCC1-207ENST00000485833 NKX2-2O95096 273 aa4.37□□□□□ -1.71
SMARCC1-207ENST00000485833 CTAGE8P0CG41 777 aa4.37□□□□□ -1.71
SMARCC1-207ENST00000485833 PAX1P15863 534 aa4.37□□□□□ -1.71
SMARCC1-207ENST00000485833 PPP2R1AP30153 589 aa4.37□□□□□ -1.71
SMARCC1-207ENST00000485833 ICAM3P32942 547 aa4.37□□□□□ -1.71
SMARCC1-207ENST00000485833 APOBEC1P41238 236 aaKnown RBP4.37□□□□□ -1.71
SMARCC1-207ENST00000485833 GYG1P46976 350 aa4.37□□□□□ -1.71
SMARCC1-207ENST00000485833 F2RL1P55085 397 aa4.37□□□□□ -1.71
SMARCC1-207ENST00000485833 RPL7AP62424 266 aaKnown RBP4.37□□□□□ -1.71
SMARCC1-207ENST00000485833 OLR1P78380 273 aa4.37□□□□□ -1.71
SMARCC1-207ENST00000485833 MRPS5P82675 430 aaKnown RBP4.37□□□□□ -1.71
SMARCC1-207ENST00000485833 PLIN5Q00G26 463 aa4.37□□□□□ -1.71
SMARCC1-207ENST00000485833 CCNG2Q16589 344 aa4.37□□□□□ -1.71
SMARCC1-207ENST00000485833 DPCR1Q3MIW9 517 aa4.37□□□□□ -1.71
SMARCC1-207ENST00000485833 CDONQ4KMG0 1287 aa4.37□□□□□ -1.71
SMARCC1-207ENST00000485833 TMEM31Q5JXX7 168 aa4.37□□□□□ -1.71
SMARCC1-207ENST00000485833 FAM171BQ6P995 826 aa4.37□□□□□ -1.71
SMARCC1-207ENST00000485833 CTAGE4Q8IX94 777 aa4.37□□□□□ -1.71
SMARCC1-207ENST00000485833 OR52I2Q8NH67 350 aa4.37□□□□□ -1.71
SMARCC1-207ENST00000485833 SMARCE1Q969G3 411 aa4.37□□□□□ -1.71
SMARCC1-207ENST00000485833 FAM149B1Q96BN6 582 aa4.37□□□□□ -1.71
SMARCC1-207ENST00000485833 INTS12Q96CB8 462 aaKnown RBP4.37□□□□□ -1.71
SMARCC1-207ENST00000485833 ZNF501Q96CX3 271 aaPredicted RBP4.37□□□□□ -1.71
SMARCC1-207ENST00000485833 JMJD4Q9H9V9 463 aa4.37□□□□□ -1.71
SMARCC1-207ENST00000485833 PREBQ9HCU5 417 aa4.37□□□□□ -1.71
SMARCC1-207ENST00000485833 FAM118AQ9NWS6 357 aa4.37□□□□□ -1.71
SMARCC1-207ENST00000485833 DLGAP2Q9P1A6 1054 aa4.37□□□□□ -1.71
SMARCC1-207ENST00000485833 MAU2Q9Y6X3 613 aa4.37□□□□□ -1.71
SMARCC1-207ENST00000485833 A0A0G2JMZ2 1700 aa4.37□□□□□ -1.71
SMARCC1-207ENST00000485833 CHD6Q8TD26 2715 aa4.37□□□□□ -1.71
SMARCC1-207ENST00000485833 VPS13AQ96RL7 3174 aa4.37□□□□□ -1.71
SMARCC1-207ENST00000485833 A0A1B0GVC2 190 aa4.36□□□□□ -1.71
SMARCC1-207ENST00000485833 FAM90A26D6RGX4 464 aa4.36□□□□□ -1.71
SMARCC1-207ENST00000485833 KCNN4O15554 427 aa4.36□□□□□ -1.71
SMARCC1-207ENST00000485833 ZG16O60844 167 aa4.36□□□□□ -1.71
SMARCC1-207ENST00000485833 WDHD1O75717 1129 aaPredicted RBP4.36□□□□□ -1.71
SMARCC1-207ENST00000485833 IGHV4-39P01824 125 aa4.36□□□□□ -1.71
SMARCC1-207ENST00000485833 AMBPP02760 352 aa4.36□□□□□ -1.71
SMARCC1-207ENST00000485833 RPL24P83731 157 aaKnown RBP4.36□□□□□ -1.71
SMARCC1-207ENST00000485833 RUNX1T1Q06455 604 aa4.36□□□□□ -1.71
SMARCC1-207ENST00000485833 TCP10Q12799 353 aa4.36□□□□□ -1.71
SMARCC1-207ENST00000485833 TMEM115Q12893 351 aaPredicted RBP4.36□□□□□ -1.71
SMARCC1-207ENST00000485833 FRG1Q14331 258 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms