RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 KCTD3Q9Y597 815 aa9.78□□□□□ -0.84
CPSF4-213ENST00000484112 PCYT1BQ9Y5K3 369 aaPredicted RBP9.78□□□□□ -0.84
CPSF4-213ENST00000484112 KCNMB2Q9Y691 235 aa9.78□□□□□ -0.84
CPSF4-213ENST00000484112 TLN1Q9Y490 2541 aaKnown RBP9.78□□□□□ -0.84
CPSF4-213ENST00000484112 CDC14CA4D256 554 aa9.77□□□□□ -0.85
CPSF4-213ENST00000484112 MGAT4DA6NG13 374 aa9.77□□□□□ -0.85
CPSF4-213ENST00000484112 SDR42E2A6NKP2 422 aa9.77□□□□□ -0.85
CPSF4-213ENST00000484112 TTLL8A6PVC2 850 aa9.77□□□□□ -0.85
CPSF4-213ENST00000484112 PFDN6O15212 129 aa9.77□□□□□ -0.85
CPSF4-213ENST00000484112 DLGAP3O95886 979 aa9.77□□□□□ -0.85
CPSF4-213ENST00000484112 ZNF28P17035 718 aa9.77□□□□□ -0.85
CPSF4-213ENST00000484112 PAMP19021 973 aa9.77□□□□□ -0.85
CPSF4-213ENST00000484112 GRIA1P42261 906 aa9.77□□□□□ -0.85
CPSF4-213ENST00000484112 HALP42357 657 aa9.77□□□□□ -0.85
CPSF4-213ENST00000484112 UQCRFS1P47985 274 aa9.77□□□□□ -0.85
CPSF4-213ENST00000484112 CD97P48960 835 aa9.77□□□□□ -0.85
CPSF4-213ENST00000484112 TTPAP49638 278 aa9.77□□□□□ -0.85
CPSF4-213ENST00000484112 PRLHRP49683 370 aa9.77□□□□□ -0.85
CPSF4-213ENST00000484112 SEPHS1P49903 392 aa9.77□□□□□ -0.85
CPSF4-213ENST00000484112 EPHA4P54764 986 aa9.77□□□□□ -0.85
CPSF4-213ENST00000484112 PRAMEP78395 509 aa9.77□□□□□ -0.85
CPSF4-213ENST00000484112 TMPRSS15P98073 1019 aa9.77□□□□□ -0.85
CPSF4-213ENST00000484112 DR1Q01658 176 aa9.77□□□□□ -0.85
CPSF4-213ENST00000484112 PLOD1Q02809 727 aaPredicted RBP9.77□□□□□ -0.85
CPSF4-213ENST00000484112 PTPRCAPQ14761 206 aa9.77□□□□□ -0.85
CPSF4-213ENST00000484112 KHDC1Q4VXA5 237 aaKnown RBP9.77□□□□□ -0.85
CPSF4-213ENST00000484112 ZRANB3Q5FWF4 1079 aa9.77□□□□□ -0.85
CPSF4-213ENST00000484112 FHL5Q5TD97 284 aa9.77□□□□□ -0.85
CPSF4-213ENST00000484112 TMEM220Q6QAJ8 160 aa9.77□□□□□ -0.85
CPSF4-213ENST00000484112 CRTC3Q6UUV7 619 aa9.77□□□□□ -0.85
CPSF4-213ENST00000484112 C6orf15Q6UXA7 325 aaPredicted RBP9.77□□□□□ -0.85
CPSF4-213ENST00000484112 ZNF534Q76KX8 674 aa9.77□□□□□ -0.85
CPSF4-213ENST00000484112 TMEM135Q86UB9 458 aa9.77□□□□□ -0.85
CPSF4-213ENST00000484112 RASGRP3Q8IV61 690 aa9.77□□□□□ -0.85
CPSF4-213ENST00000484112 LMNTD2Q8IXW0 634 aa9.77□□□□□ -0.85
CPSF4-213ENST00000484112 NAT8LQ8N9F0 302 aa9.77□□□□□ -0.85
CPSF4-213ENST00000484112 GALNT6Q8NCL4 622 aa9.77□□□□□ -0.85
CPSF4-213ENST00000484112 OR4L1Q8NH43 312 aa9.77□□□□□ -0.85
CPSF4-213ENST00000484112 ZFPM2Q8WW38 1151 aa9.77□□□□□ -0.85
CPSF4-213ENST00000484112 CAPZA3Q96KX2 299 aa9.77□□□□□ -0.85
CPSF4-213ENST00000484112 CCM2Q9BSQ5 444 aa9.77□□□□□ -0.85
CPSF4-213ENST00000484112 NAT9Q9BTE0 207 aa9.77□□□□□ -0.85
CPSF4-213ENST00000484112 DDX47Q9H0S4 455 aaKnown RBP9.77□□□□□ -0.85
CPSF4-213ENST00000484112 PRDM8Q9NQV8 689 aa9.77□□□□□ -0.85
CPSF4-213ENST00000484112 TREX1Q9NSU2 369 aa9.77□□□□□ -0.85
CPSF4-213ENST00000484112 POT1Q9NUX5 634 aa9.77□□□□□ -0.85
CPSF4-213ENST00000484112 SAMD15Q9P1V8 674 aa9.77□□□□□ -0.85
CPSF4-213ENST00000484112 PLEKHB1Q9UF11 243 aaPredicted RBP9.77□□□□□ -0.85
CPSF4-213ENST00000484112 ANAPC5Q9UJX4 755 aa9.77□□□□□ -0.85
CPSF4-213ENST00000484112 CROTQ9UKG9 612 aa9.77□□□□□ -0.85
CPSF4-213ENST00000484112 SOX13Q9UN79 622 aa9.77□□□□□ -0.85
CPSF4-213ENST00000484112 UBR5O95071 2799 aaPredicted RBP9.76□□□□□ -0.85
CPSF4-213ENST00000484112 FAM237BA0A1B0GVD1 139 aa9.76□□□□□ -0.85
CPSF4-213ENST00000484112 DNALI1O14645 258 aaPredicted RBP9.76□□□□□ -0.85
CPSF4-213ENST00000484112 MTX2O75431 263 aa9.76□□□□□ -0.85
CPSF4-213ENST00000484112 POP7O75817 140 aaKnown RBP9.76□□□□□ -0.85
CPSF4-213ENST00000484112 KIAA0754O94854 1291 aa9.76□□□□□ -0.85
CPSF4-213ENST00000484112 FURINP09958 794 aa9.76□□□□□ -0.85
CPSF4-213ENST00000484112 TYRP1P17643 537 aa9.76□□□□□ -0.85
CPSF4-213ENST00000484112 GNLYP22749 145 aa9.76□□□□□ -0.85
CPSF4-213ENST00000484112 FOXN2P32314 431 aa9.76□□□□□ -0.85
CPSF4-213ENST00000484112 PTGIRP43119 386 aa9.76□□□□□ -0.85
CPSF4-213ENST00000484112 MAGEA3P43357 314 aa9.76□□□□□ -0.85
CPSF4-213ENST00000484112 VPS41P49754 854 aa9.76□□□□□ -0.85
CPSF4-213ENST00000484112 CTSCP53634 463 aa9.76□□□□□ -0.85
CPSF4-213ENST00000484112 GFERP55789 205 aa9.76□□□□□ -0.85
CPSF4-213ENST00000484112 SESN2P58004 480 aaPredicted RBP9.76□□□□□ -0.85
CPSF4-213ENST00000484112 RPA4Q13156 261 aa9.76□□□□□ -0.85
CPSF4-213ENST00000484112 TUBB2AQ13885 445 aa9.76□□□□□ -0.85
CPSF4-213ENST00000484112 MORF4L2Q15014 288 aa9.76□□□□□ -0.85
CPSF4-213ENST00000484112 TRIP13Q15645 432 aaPredicted RBP9.76□□□□□ -0.85
CPSF4-213ENST00000484112 CCDC38Q502W7 563 aa9.76□□□□□ -0.85
CPSF4-213ENST00000484112 FASTKD1Q53R41 847 aaKnown RBP9.76□□□□□ -0.85
CPSF4-213ENST00000484112 ZNF648Q5T619 568 aaPredicted RBP9.76□□□□□ -0.85
CPSF4-213ENST00000484112 RNF187Q5TA31 235 aaPredicted RBP9.76□□□□□ -0.85
CPSF4-213ENST00000484112 RNASEH2BQ5TBB1 312 aaKnown RBP9.76□□□□□ -0.85
CPSF4-213ENST00000484112 METRNLQ641Q3 311 aa9.76□□□□□ -0.85
CPSF4-213ENST00000484112 TCTN3Q6NUS6 607 aa9.76□□□□□ -0.85
CPSF4-213ENST00000484112 ZNF449Q6P9G9 518 aa9.76□□□□□ -0.85
CPSF4-213ENST00000484112 TAS2R42Q7RTR8 314 aa9.76□□□□□ -0.85
CPSF4-213ENST00000484112 MAATS1Q7Z4T9 603 aa9.76□□□□□ -0.85
CPSF4-213ENST00000484112 CAND1Q86VP6 1230 aaKnown RBP9.76□□□□□ -0.85
CPSF4-213ENST00000484112 SERPINA9Q86WD7 417 aa9.76□□□□□ -0.85
CPSF4-213ENST00000484112 LRRC6Q86X45 466 aa9.76□□□□□ -0.85
CPSF4-213ENST00000484112 PLXDC1Q8IUK5 500 aa9.76□□□□□ -0.85
CPSF4-213ENST00000484112 EFCAB3Q8N7B9 438 aa9.76□□□□□ -0.85
CPSF4-213ENST00000484112 BBOF1Q8ND07 529 aa9.76□□□□□ -0.85
CPSF4-213ENST00000484112 HM13Q8TCT9 377 aa9.76□□□□□ -0.85
CPSF4-213ENST00000484112 HDAC10Q969S8 669 aa9.76□□□□□ -0.85
CPSF4-213ENST00000484112 TRIM44Q96DX7 344 aaPredicted RBP9.76□□□□□ -0.85
CPSF4-213ENST00000484112 STAMBPL1Q96FJ0 436 aa9.76□□□□□ -0.85
CPSF4-213ENST00000484112 SERPINB12Q96P63 405 aa9.76□□□□□ -0.85
CPSF4-213ENST00000484112 TGM7Q96PF1 710 aa9.76□□□□□ -0.85
CPSF4-213ENST00000484112 OR6C1Q96RD1 312 aa9.76□□□□□ -0.85
CPSF4-213ENST00000484112 TCF12Q99081 682 aa9.76□□□□□ -0.85
CPSF4-213ENST00000484112 TUBB2BQ9BVA1 445 aa9.76□□□□□ -0.85
CPSF4-213ENST00000484112 TSSK1BQ9BXA7 367 aa9.76□□□□□ -0.85
CPSF4-213ENST00000484112 TWSG1Q9GZX9 223 aa9.76□□□□□ -0.85
CPSF4-213ENST00000484112 ARFGAP3Q9NP61 516 aa9.76□□□□□ -0.85
CPSF4-213ENST00000484112 CHRAC1Q9NRG0 131 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms