RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 RCBTB1Q8NDN9 531 aa10.02□□□□□ -0.81
HDAC6-222ENST00000478095 CALML6Q8TD86 181 aa10.02□□□□□ -0.81
HDAC6-222ENST00000478095 RSC1A1Q92681 617 aa10.02□□□□□ -0.81
HDAC6-222ENST00000478095 TFGQ92734 400 aaPredicted RBP10.02□□□□□ -0.81
HDAC6-222ENST00000478095 GATA6Q92908 595 aa10.02□□□□□ -0.81
HDAC6-222ENST00000478095 TMEM159Q96B96 161 aa10.02□□□□□ -0.81
HDAC6-222ENST00000478095 C9orf72Q96LT7 481 aa10.02□□□□□ -0.81
HDAC6-222ENST00000478095 CCDC74BQ96LY2 380 aa10.02□□□□□ -0.81
HDAC6-222ENST00000478095 PANX3Q96QZ0 392 aa10.02□□□□□ -0.81
HDAC6-222ENST00000478095 FERD3LQ96RJ6 166 aa10.02□□□□□ -0.81
HDAC6-222ENST00000478095 NRTNQ99748 197 aa10.02□□□□□ -0.81
HDAC6-222ENST00000478095 HGH1Q9BTY7 390 aa10.02□□□□□ -0.81
HDAC6-222ENST00000478095 INTS10Q9NVR2 710 aaKnown RBP10.02□□□□□ -0.81
HDAC6-222ENST00000478095 OGFRQ9NZT2 677 aa10.02□□□□□ -0.81
HDAC6-222ENST00000478095 GALPQ9UBC7 116 aa10.02□□□□□ -0.81
HDAC6-222ENST00000478095 KLHL3Q9UH77 587 aa10.02□□□□□ -0.81
HDAC6-222ENST00000478095 PLXNB3Q9ULL4 1909 aa10.01□□□□□ -0.81
HDAC6-222ENST00000478095 IGHV5-10-1A0A0J9YXX1 117 aa10.01□□□□□ -0.81
HDAC6-222ENST00000478095 A0A1W2PNU3 283 aaPredicted RBP10.01□□□□□ -0.81
HDAC6-222ENST00000478095 TRABD2BA6NFA1 517 aa10.01□□□□□ -0.81
HDAC6-222ENST00000478095 A8MU76 341 aa10.01□□□□□ -0.81
HDAC6-222ENST00000478095 E5RI56 91 aa10.01□□□□□ -0.81
HDAC6-222ENST00000478095 GPC4O75487 556 aa10.01□□□□□ -0.81
HDAC6-222ENST00000478095 PIAS1O75925 651 aa10.01□□□□□ -0.81
HDAC6-222ENST00000478095 APOA4P06727 396 aa10.01□□□□□ -0.81
HDAC6-222ENST00000478095 PROS1P07225 676 aa10.01□□□□□ -0.81
HDAC6-222ENST00000478095 HGFP14210 728 aa10.01□□□□□ -0.81
HDAC6-222ENST00000478095 AMD1P17707 334 aa10.01□□□□□ -0.81
HDAC6-222ENST00000478095 AOAHP28039 575 aa10.01□□□□□ -0.81
HDAC6-222ENST00000478095 GABRB3P28472 473 aa10.01□□□□□ -0.81
HDAC6-222ENST00000478095 SSTR1P30872 391 aa10.01□□□□□ -0.81
HDAC6-222ENST00000478095 ADARP55265 1226 aaKnown RBP10.01□□□□□ -0.81
HDAC6-222ENST00000478095 GFERP55789 205 aa10.01□□□□□ -0.81
HDAC6-222ENST00000478095 CAV1Q03135 178 aa10.01□□□□□ -0.81
HDAC6-222ENST00000478095 DNTTIP2Q5QJE6 756 aaKnown RBP10.01□□□□□ -0.81
HDAC6-222ENST00000478095 TEDDM1Q5T9Z0 273 aa10.01□□□□□ -0.81
HDAC6-222ENST00000478095 UNQ6494/PRO21346Q6UXR6 183 aa10.01□□□□□ -0.81
HDAC6-222ENST00000478095 OTOAQ7RTW8 1153 aa10.01□□□□□ -0.81
HDAC6-222ENST00000478095 PALM2Q8IXS6 379 aa10.01□□□□□ -0.81
HDAC6-222ENST00000478095 RBM12BQ8IXT5 1001 aaKnown RBP10.01□□□□□ -0.81
HDAC6-222ENST00000478095 CACTIN-AS1Q8N1I8 211 aa10.01□□□□□ -0.81
HDAC6-222ENST00000478095 SIDT2Q8NBJ9 832 aaKnown RBP10.01□□□□□ -0.81
HDAC6-222ENST00000478095 C2CD4AQ8NCU7 369 aaPredicted RBP10.01□□□□□ -0.81
HDAC6-222ENST00000478095 OR5AR1Q8NGP9 310 aa10.01□□□□□ -0.81
HDAC6-222ENST00000478095 CFAP61Q8NHU2 1237 aa10.01□□□□□ -0.81
HDAC6-222ENST00000478095 GSDMBQ8TAX9 411 aa10.01□□□□□ -0.81
HDAC6-222ENST00000478095 MDM1Q8TC05 714 aa10.01□□□□□ -0.81
HDAC6-222ENST00000478095 PYROXD1Q8WU10 500 aa10.01□□□□□ -0.81
HDAC6-222ENST00000478095 SKA2Q8WVK7 121 aaPredicted RBP10.01□□□□□ -0.81
HDAC6-222ENST00000478095 IFT81Q8WYA0 676 aa10.01□□□□□ -0.81
HDAC6-222ENST00000478095 TMEM74Q96NL1 305 aa10.01□□□□□ -0.81
HDAC6-222ENST00000478095 NDNQ99608 321 aa10.01□□□□□ -0.81
HDAC6-222ENST00000478095 SLC30A3Q99726 388 aa10.01□□□□□ -0.81
HDAC6-222ENST00000478095 CCDC68Q9H2F9 335 aa10.01□□□□□ -0.81
HDAC6-222ENST00000478095 XKR8Q9H6D3 395 aa10.01□□□□□ -0.81
HDAC6-222ENST00000478095 KIR3DX1Q9H7L2 352 aa10.01□□□□□ -0.81
HDAC6-222ENST00000478095 UCK1Q9HA47 277 aa10.01□□□□□ -0.81
HDAC6-222ENST00000478095 ZDHHC18Q9NUE0 388 aa10.01□□□□□ -0.81
HDAC6-222ENST00000478095 CIDEBQ9UHD4 219 aa10.01□□□□□ -0.81
HDAC6-222ENST00000478095 SLC24A2Q9UI40 661 aa10.01□□□□□ -0.81
HDAC6-222ENST00000478095 PLAGL1Q9UM63 463 aa10.01□□□□□ -0.81
HDAC6-222ENST00000478095 SATB2Q9UPW6 733 aa10.01□□□□□ -0.81
HDAC6-222ENST00000478095 RUVBL2Q9Y230 463 aaKnown RBP10.01□□□□□ -0.81
HDAC6-222ENST00000478095 CDYLQ9Y232 598 aa10.01□□□□□ -0.81
HDAC6-222ENST00000478095 ASF1AQ9Y294 204 aa10.01□□□□□ -0.81
HDAC6-222ENST00000478095 COLEC10Q9Y6Z7 277 aa10.01□□□□□ -0.81
HDAC6-222ENST00000478095 GOLGA4Q13439 2230 aaKnown RBP10.01□□□□□ -0.81
HDAC6-222ENST00000478095 H3BMM5 538 aa10□□□□□ -0.81
HDAC6-222ENST00000478095 EIF3HO15372 352 aaKnown RBP eCLIP10□□□□□ -0.81
HDAC6-222ENST00000478095 THRAP10827 490 aa10□□□□□ -0.81
HDAC6-222ENST00000478095 ACADLP28330 430 aa10□□□□□ -0.81
HDAC6-222ENST00000478095 CCKBRP32239 447 aa10□□□□□ -0.81
HDAC6-222ENST00000478095 CAPZBP47756 277 aa10□□□□□ -0.81
HDAC6-222ENST00000478095 LEPRP48357 1165 aaKnown RBP10□□□□□ -0.81
HDAC6-222ENST00000478095 CD151P48509 253 aa10□□□□□ -0.81
HDAC6-222ENST00000478095 LIMK2P53671 638 aa10□□□□□ -0.81
HDAC6-222ENST00000478095 GPX6P59796 221 aa10□□□□□ -0.81
HDAC6-222ENST00000478095 PPP1CAP62136 330 aa10□□□□□ -0.81
HDAC6-222ENST00000478095 GABREP78334 506 aa10□□□□□ -0.81
HDAC6-222ENST00000478095 PLOD1Q02809 727 aaPredicted RBP10□□□□□ -0.81
HDAC6-222ENST00000478095 ZFP36L1Q07352 338 aaKnown RBP10□□□□□ -0.81
HDAC6-222ENST00000478095 CYP4F3Q08477 520 aa10□□□□□ -0.81
HDAC6-222ENST00000478095 MGAT5Q09328 741 aa10□□□□□ -0.81
HDAC6-222ENST00000478095 ABRQ12979 859 aa10□□□□□ -0.81
HDAC6-222ENST00000478095 CUL1Q13616 776 aa10□□□□□ -0.81
HDAC6-222ENST00000478095 C16orf72Q14CZ0 275 aa10□□□□□ -0.81
HDAC6-222ENST00000478095 RBM20Q5T481 1227 aaKnown RBP10□□□□□ -0.81
HDAC6-222ENST00000478095 IRGCQ6NXR0 463 aa10□□□□□ -0.81
HDAC6-222ENST00000478095 TMEM71Q6P5X7 295 aa10□□□□□ -0.81
HDAC6-222ENST00000478095 CNTN4Q8IWV2 1026 aa10□□□□□ -0.81
HDAC6-222ENST00000478095 SLC22A15Q8IZD6 547 aa10□□□□□ -0.81
HDAC6-222ENST00000478095 ZBTB2Q8N680 514 aa10□□□□□ -0.81
HDAC6-222ENST00000478095 ACVR1CQ8NER5 493 aa10□□□□□ -0.81
HDAC6-222ENST00000478095 OR4E2Q8NGC2 313 aa10□□□□□ -0.81
HDAC6-222ENST00000478095 OR4D9Q8NGE8 314 aa10□□□□□ -0.81
HDAC6-222ENST00000478095 OR52E1Q8NGJ3 308 aa10□□□□□ -0.81
HDAC6-222ENST00000478095 GIMAP7Q8NHV1 300 aa10□□□□□ -0.81
HDAC6-222ENST00000478095 GABPB2Q8TAK5 448 aaPredicted RBP10□□□□□ -0.81
HDAC6-222ENST00000478095 ASZ1Q8WWH4 475 aa10□□□□□ -0.81
HDAC6-222ENST00000478095 SEC14L1Q92503 715 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms