RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 NAA25Q14CX7 972 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 TCTN1Q2MV58 587 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 MYLK3Q32MK0 819 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 CTXN3Q4LDR2 81 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 SLC45A4Q5BKX6 768 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 BMP2KLQ5H9B9 411 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 FAM83BQ5T0W9 1011 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 DCST1Q5T197 706 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 C10orf62Q5T681 223 aaPredicted RBP1.57□□□□□ -2.16
CCDC39-203ENST00000473854 JMJD6Q6NYC1 403 aaPredicted RBP1.57□□□□□ -2.16
CCDC39-203ENST00000473854 DUS1LQ6P1R4 473 aaKnown RBP1.57□□□□□ -2.16
CCDC39-203ENST00000473854 NOXA1Q86UR1 476 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 LONP2Q86WA8 852 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 LSMEM2Q8N112 164 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 SPATA6LQ8N4H0 392 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 SAMD3Q8N6K7 520 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 PCDH20Q8N6Y1 951 aaKnown RBP1.57□□□□□ -2.16
CCDC39-203ENST00000473854 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP1.57□□□□□ -2.16
CCDC39-203ENST00000473854 AFG1LQ8WV93 481 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 RAB40AQ8WXH6 277 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 ARHGAP45Q92619 1136 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 SDCCAG3Q96C92 435 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 NSMCE3Q96MG7 304 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 RPS6KC1Q96S38 1066 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 PSD2Q9BQI7 771 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 RTP3Q9BQQ7 232 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 ANP32EQ9BTT0 268 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 TWSG1Q9GZX9 223 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 UPF3AQ9H1J1 476 aaKnown RBP1.57□□□□□ -2.16
CCDC39-203ENST00000473854 P2RY12Q9H244 342 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 NDST4Q9H3R1 872 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 EPHX3Q9H6B9 360 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 PPP1R3EQ9H7J1 279 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 MMP25Q9NPA2 562 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 PLCB1Q9NQ66 1216 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 DDX4Q9NQI0 724 aaKnown RBP1.57□□□□□ -2.16
CCDC39-203ENST00000473854 THEGQ9P2T0 379 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 GRHPRQ9UBQ7 328 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 CTNNAL1Q9UBT7 734 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 POMT2Q9UKY4 750 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 EXOC6BQ9Y2D4 811 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 LRRFIP2Q9Y608 721 aaKnown RBP1.57□□□□□ -2.16
CCDC39-203ENST00000473854 KIAA1217Q5T5P2 1943 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 MKI67P46013 3256 aaKnown RBP1.57□□□□□ -2.16
CCDC39-203ENST00000473854 PCDH11XQ9BZA7 1347 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 PCDH11YQ9BZA8 1340 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 JCADQ9P266 1359 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 BCL9O00512 1426 aa1.57□□□□□ -2.16
CCDC39-203ENST00000473854 COL11A1P12107 1806 aaPredicted RBP1.56□□□□□ -2.16
CCDC39-203ENST00000473854 COL1A1P02452 1464 aaPredicted RBP1.56□□□□□ -2.16
CCDC39-203ENST00000473854 SBF1O95248 1867 aa1.56□□□□□ -2.16
CCDC39-203ENST00000473854 OTOFQ9HC10 1997 aa1.56□□□□□ -2.16
CCDC39-203ENST00000473854 CDH23Q9H251 3354 aa1.56□□□□□ -2.16
CCDC39-203ENST00000473854 IGHV3OR16-10A0A075B7F0 116 aa1.56□□□□□ -2.16
CCDC39-203ENST00000473854 PI4KAP2A4QPH2 592 aa1.56□□□□□ -2.16
CCDC39-203ENST00000473854 BCAT2O15382 392 aaPredicted RBP1.56□□□□□ -2.16
CCDC39-203ENST00000473854 IPO8O15397 1037 aaKnown RBP1.56□□□□□ -2.16
CCDC39-203ENST00000473854 TRMUO75648 421 aaKnown RBP1.56□□□□□ -2.16
CCDC39-203ENST00000473854 LDHAP00338 332 aaKnown RBP1.56□□□□□ -2.16
CCDC39-203ENST00000473854 HOXB7P09629 217 aa1.56□□□□□ -2.16
CCDC39-203ENST00000473854 EIF2S2P20042 333 aaKnown RBP1.56□□□□□ -2.16
CCDC39-203ENST00000473854 TAS2R38P59533 333 aa1.56□□□□□ -2.16
CCDC39-203ENST00000473854 TEFQ10587 303 aa1.56□□□□□ -2.16
CCDC39-203ENST00000473854 BIRC2Q13490 618 aa1.56□□□□□ -2.16
CCDC39-203ENST00000473854 TRIM14Q14142 442 aa1.56□□□□□ -2.16
CCDC39-203ENST00000473854 VEPH1Q14D04 833 aa1.56□□□□□ -2.16
CCDC39-203ENST00000473854 TAF7Q15545 349 aaPredicted RBP1.56□□□□□ -2.16
CCDC39-203ENST00000473854 CCDC38Q502W7 563 aa1.56□□□□□ -2.16
CCDC39-203ENST00000473854 C1orf141Q5JVX7 400 aa1.56□□□□□ -2.16
CCDC39-203ENST00000473854 BEND3Q5T5X7 828 aa1.56□□□□□ -2.16
CCDC39-203ENST00000473854 ANKRD45Q5TZF3 282 aa1.56□□□□□ -2.16
CCDC39-203ENST00000473854 CCDC30Q5VVM6 783 aa1.56□□□□□ -2.16
CCDC39-203ENST00000473854 RSBN1Q5VWQ0 802 aaPredicted RBP1.56□□□□□ -2.16
CCDC39-203ENST00000473854 CCDC174Q6PII3 467 aa1.56□□□□□ -2.16
CCDC39-203ENST00000473854 C17orf99Q6UX52 265 aa1.56□□□□□ -2.16
CCDC39-203ENST00000473854 PACS1Q6VY07 963 aa1.56□□□□□ -2.16
CCDC39-203ENST00000473854 ISCA2Q86U28 154 aa1.56□□□□□ -2.16
CCDC39-203ENST00000473854 GPAT4Q86UL3 456 aa1.56□□□□□ -2.16
CCDC39-203ENST00000473854 FAM160B2Q86V87 743 aa1.56□□□□□ -2.16
CCDC39-203ENST00000473854 UNC5CLQ8IV45 518 aa1.56□□□□□ -2.16
CCDC39-203ENST00000473854 CACNA2D3Q8IZS8 1091 aa1.56□□□□□ -2.16
CCDC39-203ENST00000473854 GPD1LQ8N335 351 aa1.56□□□□□ -2.16
CCDC39-203ENST00000473854 PI4KAP1Q8N8J0 262 aa1.56□□□□□ -2.16
CCDC39-203ENST00000473854 GCC1Q96CN9 775 aa1.56□□□□□ -2.16
CCDC39-203ENST00000473854 CNOT6LQ96LI5 555 aaKnown RBP1.56□□□□□ -2.16
CCDC39-203ENST00000473854 ZSCAN31Q96LW9 406 aaPredicted RBP1.56□□□□□ -2.16
CCDC39-203ENST00000473854 KRT12Q99456 494 aa1.56□□□□□ -2.16
CCDC39-203ENST00000473854 CD180Q99467 661 aa1.56□□□□□ -2.16
CCDC39-203ENST00000473854 ARPC5LQ9BPX5 153 aa1.56□□□□□ -2.16
CCDC39-203ENST00000473854 EIF2AK1Q9BQI3 630 aaKnown RBP1.56□□□□□ -2.16
CCDC39-203ENST00000473854 USP44Q9H0E7 712 aa1.56□□□□□ -2.16
CCDC39-203ENST00000473854 KCNN2Q9H2S1 579 aa1.56□□□□□ -2.16
CCDC39-203ENST00000473854 RWDD1Q9H446 243 aaPredicted RBP1.56□□□□□ -2.16
CCDC39-203ENST00000473854 STN1Q9H668 368 aaKnown RBP1.56□□□□□ -2.16
CCDC39-203ENST00000473854 DCTPP1Q9H773 170 aa1.56□□□□□ -2.16
CCDC39-203ENST00000473854 MAGEE1Q9HCI5 957 aa1.56□□□□□ -2.16
CCDC39-203ENST00000473854 GPR108Q9NPR9 543 aa1.56□□□□□ -2.16
CCDC39-203ENST00000473854 PA2G4Q9UQ80 394 aaKnown RBP1.56□□□□□ -2.16
CCDC39-203ENST00000473854 DNAJC16Q9Y2G8 782 aa1.56□□□□□ -2.16
CCDC39-203ENST00000473854 GDAQ9Y2T3 454 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms