RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 MTORP42345 2549 aa4.94□□□□□ -1.62
COPS3-204ENST00000462236 CCDC169A6NNP5 214 aa4.94□□□□□ -1.62
COPS3-204ENST00000462236 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.94□□□□□ -1.62
COPS3-204ENST00000462236 BTBD18B2RXH4 712 aa4.94□□□□□ -1.62
COPS3-204ENST00000462236 KCNJ18B7U540 433 aa4.94□□□□□ -1.62
COPS3-204ENST00000462236 C10orf142B7Z368 130 aa4.94□□□□□ -1.62
COPS3-204ENST00000462236 CYB561D2O14569 222 aa4.94□□□□□ -1.62
COPS3-204ENST00000462236 SLC9A3R1O14745 358 aaPredicted RBP4.94□□□□□ -1.62
COPS3-204ENST00000462236 CPLX1O14810 134 aa4.94□□□□□ -1.62
COPS3-204ENST00000462236 OGTO15294 1046 aa4.94□□□□□ -1.62
COPS3-204ENST00000462236 CLDN3O15551 220 aa4.94□□□□□ -1.62
COPS3-204ENST00000462236 LATS1O95835 1130 aa4.94□□□□□ -1.62
COPS3-204ENST00000462236 HOXB2P14652 356 aa4.94□□□□□ -1.62
COPS3-204ENST00000462236 GNSP15586 552 aa4.94□□□□□ -1.62
COPS3-204ENST00000462236 CHN1P15882 459 aa4.94□□□□□ -1.62
COPS3-204ENST00000462236 TGM2P21980 687 aa4.94□□□□□ -1.62
COPS3-204ENST00000462236 PSMA5P28066 241 aa4.94□□□□□ -1.62
COPS3-204ENST00000462236 KRT2P35908 639 aa4.94□□□□□ -1.62
COPS3-204ENST00000462236 PNPLA4P41247 253 aa4.94□□□□□ -1.62
COPS3-204ENST00000462236 VPS41P49754 854 aa4.94□□□□□ -1.62
COPS3-204ENST00000462236 TAF6P49848 677 aa4.94□□□□□ -1.62
COPS3-204ENST00000462236 CSRP3P50461 194 aa4.94□□□□□ -1.62
COPS3-204ENST00000462236 SLC37A1P57057 533 aa4.94□□□□□ -1.62
COPS3-204ENST00000462236 RPL10AP62906 217 aaKnown RBP4.94□□□□□ -1.62
COPS3-204ENST00000462236 POU5F1Q01860 360 aaKnown RBP4.94□□□□□ -1.62
COPS3-204ENST00000462236 ORC2Q13416 577 aaPredicted RBP4.94□□□□□ -1.62
COPS3-204ENST00000462236 PDIA5Q14554 519 aa4.94□□□□□ -1.62
COPS3-204ENST00000462236 KYAT1Q16773 422 aa4.94□□□□□ -1.62
COPS3-204ENST00000462236 CCDC142Q17RM4 750 aa4.94□□□□□ -1.62
COPS3-204ENST00000462236 HLA-BQ31612 363 aa4.94□□□□□ -1.62
COPS3-204ENST00000462236 WDR45BQ5MNZ6 344 aa4.94□□□□□ -1.62
COPS3-204ENST00000462236 SLC39A4Q6P5W5 647 aa4.94□□□□□ -1.62
COPS3-204ENST00000462236 IL27RAQ6UWB1 636 aa4.94□□□□□ -1.62
COPS3-204ENST00000462236 DHRS13Q6UX07 377 aa4.94□□□□□ -1.62
COPS3-204ENST00000462236 BBS12Q6ZW61 710 aa4.94□□□□□ -1.62
COPS3-204ENST00000462236 TRMT11Q7Z4G4 463 aaKnown RBP4.94□□□□□ -1.62
COPS3-204ENST00000462236 LRRTM4Q86VH4 590 aa4.94□□□□□ -1.62
COPS3-204ENST00000462236 RFX6Q8HWS3 928 aa4.94□□□□□ -1.62
COPS3-204ENST00000462236 SETD7Q8WTS6 366 aaKnown RBP4.94□□□□□ -1.62
COPS3-204ENST00000462236 ZG16BQ96DA0 208 aa4.94□□□□□ -1.62
COPS3-204ENST00000462236 OTUB2Q96DC9 234 aa4.94□□□□□ -1.62
COPS3-204ENST00000462236 NXPE2Q96DL1 559 aa4.94□□□□□ -1.62
COPS3-204ENST00000462236 FIZ1Q96SL8 496 aa4.94□□□□□ -1.62
COPS3-204ENST00000462236 ACOX2Q99424 681 aa4.94□□□□□ -1.62
COPS3-204ENST00000462236 ACBD6Q9BR61 282 aa4.94□□□□□ -1.62
COPS3-204ENST00000462236 TCHPQ9BT92 498 aa4.94□□□□□ -1.62
COPS3-204ENST00000462236 TM6SF1Q9BZW5 370 aa4.94□□□□□ -1.62
COPS3-204ENST00000462236 SLC13A4Q9UKG4 626 aa4.94□□□□□ -1.62
COPS3-204ENST00000462236 C2CD2Q9Y426 696 aa4.94□□□□□ -1.62
COPS3-204ENST00000462236 SLCO1B1Q9Y6L6 691 aa4.94□□□□□ -1.62
COPS3-204ENST00000462236 SVILO95425 2214 aa4.94□□□□□ -1.62
COPS3-204ENST00000462236 ZFC3H1O60293 1989 aaKnown RBP4.94□□□□□ -1.62
COPS3-204ENST00000462236 PCNX1Q96RV3 2341 aa4.94□□□□□ -1.62
COPS3-204ENST00000462236 ZNF840PA6NDX5 716 aa4.93□□□□□ -1.62
COPS3-204ENST00000462236 AGAP5A6NIR3 686 aa4.93□□□□□ -1.62
COPS3-204ENST00000462236 E9PMD0 336 aa4.93□□□□□ -1.62
COPS3-204ENST00000462236 BCAT2O15382 392 aaPredicted RBP4.93□□□□□ -1.62
COPS3-204ENST00000462236 EPB41L2O43491 1005 aaKnown RBP4.93□□□□□ -1.62
COPS3-204ENST00000462236 PFKFB2O60825 505 aa4.93□□□□□ -1.62
COPS3-204ENST00000462236 TULP3O75386 442 aa4.93□□□□□ -1.62
COPS3-204ENST00000462236 KRT38O76015 456 aa4.93□□□□□ -1.62
COPS3-204ENST00000462236 CNTN5O94779 1100 aa4.93□□□□□ -1.62
COPS3-204ENST00000462236 TUBB4AP04350 444 aa4.93□□□□□ -1.62
COPS3-204ENST00000462236 CISD3P0C7P0 127 aa4.93□□□□□ -1.62
COPS3-204ENST00000462236 RFPL3SP0C7P2 107 aa4.93□□□□□ -1.62
COPS3-204ENST00000462236 NHLRC4P0CG21 123 aaPredicted RBP4.93□□□□□ -1.62
COPS3-204ENST00000462236 XBP1P17861 261 aa4.93□□□□□ -1.62
COPS3-204ENST00000462236 MAPK9P45984 424 aa4.93□□□□□ -1.62
COPS3-204ENST00000462236 PTH2RP49190 550 aa4.93□□□□□ -1.62
COPS3-204ENST00000462236 KDSRQ06136 332 aa4.93□□□□□ -1.62
COPS3-204ENST00000462236 FOXF2Q12947 444 aa4.93□□□□□ -1.62
COPS3-204ENST00000462236 THOC5Q13769 683 aaKnown RBP4.93□□□□□ -1.62
COPS3-204ENST00000462236 SMN1Q16637 294 aaKnown RBP4.93□□□□□ -1.62
COPS3-204ENST00000462236 COLEC12Q5KU26 742 aa4.93□□□□□ -1.62
COPS3-204ENST00000462236 HYIQ5T013 277 aa4.93□□□□□ -1.62
COPS3-204ENST00000462236 HAUS3Q68CZ6 603 aa4.93□□□□□ -1.62
COPS3-204ENST00000462236 DENND1BQ6P3S1 775 aa4.93□□□□□ -1.62
COPS3-204ENST00000462236 CPLX2Q6PUV4 134 aaKnown RBP4.93□□□□□ -1.62
COPS3-204ENST00000462236 ADGRF3Q8IZF5 1079 aa4.93□□□□□ -1.62
COPS3-204ENST00000462236 THEM5Q8N1Q8 247 aa4.93□□□□□ -1.62
COPS3-204ENST00000462236 PDCL2Q8N4E4 241 aa4.93□□□□□ -1.62
COPS3-204ENST00000462236 ZCCHC9Q8N567 271 aaKnown RBP4.93□□□□□ -1.62
COPS3-204ENST00000462236 FAM47BQ8NA70 645 aa4.93□□□□□ -1.62
COPS3-204ENST00000462236 OR52N4Q8NGI2 321 aa4.93□□□□□ -1.62
COPS3-204ENST00000462236 ERMNQ8TAM6 284 aa4.93□□□□□ -1.62
COPS3-204ENST00000462236 RFFLQ8WZ73 363 aa4.93□□□□□ -1.62
COPS3-204ENST00000462236 FGF11Q92914 225 aa4.93□□□□□ -1.62
COPS3-204ENST00000462236 ARRDC3Q96B67 414 aa4.93□□□□□ -1.62
COPS3-204ENST00000462236 COG8Q96MW5 612 aa4.93□□□□□ -1.62
COPS3-204ENST00000462236 TWNKQ96RR1 684 aa4.93□□□□□ -1.62
COPS3-204ENST00000462236 MMTAG2Q9BU76 263 aaKnown RBP4.93□□□□□ -1.62
COPS3-204ENST00000462236 TIPINQ9BVW5 301 aa4.93□□□□□ -1.62
COPS3-204ENST00000462236 ASB7Q9H672 318 aa4.93□□□□□ -1.62
COPS3-204ENST00000462236 RPF1Q9H9Y2 349 aaKnown RBP4.93□□□□□ -1.62
COPS3-204ENST00000462236 CELSR2Q9HCU4 2923 aa4.93□□□□□ -1.62
COPS3-204ENST00000462236 TRPC7Q9HCX4 862 aa4.93□□□□□ -1.62
COPS3-204ENST00000462236 SLC22A11Q9NSA0 550 aa4.93□□□□□ -1.62
COPS3-204ENST00000462236 DDX19AQ9NUU7 478 aaKnown RBP4.93□□□□□ -1.62
COPS3-204ENST00000462236 TMEM30AQ9NV96 361 aa4.93□□□□□ -1.62
COPS3-204ENST00000462236 RRN3Q9NYV6 651 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms