RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 APOBEC1P41238 236 aaKnown RBP3.29□□□□□ -1.88
VPS8-215ENST00000460158 PRCPP42785 496 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 MTIF2P46199 727 aaKnown RBP3.29□□□□□ -1.88
VPS8-215ENST00000460158 CAMPP49913 170 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 PEX5P50542 639 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 CLCNKAP51800 687 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 LUMP51884 338 aaPredicted RBP3.29□□□□□ -1.88
VPS8-215ENST00000460158 STARD6P59095 220 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 GMFBP60983 142 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 CCNA1P78396 465 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 MRPS34P82930 218 aaKnown RBP3.29□□□□□ -1.88
VPS8-215ENST00000460158 ARF5P84085 180 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 TFAP4Q01664 338 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 SCN1BQ07699 218 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 FOXM1Q08050 763 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 ACSM2AQ08AH3 577 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 ZNF155Q12901 538 aaPredicted RBP3.29□□□□□ -1.88
VPS8-215ENST00000460158 DLG1Q12959 904 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 SNX1Q13596 522 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 SF3B4Q15427 424 aaKnown RBP eCLIP3.29□□□□□ -1.88
VPS8-215ENST00000460158 INAQ16352 499 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 IMMTQ16891 758 aaKnown RBP3.29□□□□□ -1.88
VPS8-215ENST00000460158 PNLIPRP3Q17RR3 467 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 ZNF585BQ52M93 769 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 KLHL22Q53GT1 634 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 C9orf152Q5JTZ5 239 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 KCNT1Q5JUK3 1230 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 KRBOX4Q5JUW0 171 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 GLRA4Q5JXX5 417 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 FRG2Q64ET8 278 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 ACSM2BQ68CK6 577 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 ADALQ6DHV7 355 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 DENND5BQ6ZUT9 1274 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 ARMC9Q7Z3E5 817 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 TSPAN33Q86UF1 283 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 NRROSQ86YC3 692 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 ADHFE1Q8IWW8 467 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 DUSP19Q8WTR2 217 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 NUDCD2Q8WVJ2 157 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 SEPT1Q8WYJ6 367 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 TANKQ92844 425 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 RTP4Q96DX8 246 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 PGAM5Q96HS1 289 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 COG3Q96JB2 828 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 AGAP3Q96P47 875 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 TM6SF1Q9BZW5 370 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 PCDH9Q9HC56 1237 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 POLE3Q9NRF9 147 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 TCP11L1Q9NUJ3 509 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 EXOC1Q9NV70 894 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 DDX18Q9NVP1 670 aaKnown RBP3.29□□□□□ -1.88
VPS8-215ENST00000460158 SMARCAL1Q9NZC9 954 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 OGFRQ9NZT2 677 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 IL19Q9UHD0 177 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 FBXW11Q9UKB1 542 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 KCNS2Q9ULS6 477 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 PADI3Q9ULW8 664 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 NENFQ9UMX5 172 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 PIN4Q9Y237 131 aaKnown RBP3.29□□□□□ -1.88
VPS8-215ENST00000460158 N6AMT1Q9Y5N5 214 aa3.29□□□□□ -1.88
VPS8-215ENST00000460158 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.28□□□□□ -1.88
VPS8-215ENST00000460158 PDS5AQ29RF7 1337 aaKnown RBP3.28□□□□□ -1.88
VPS8-215ENST00000460158 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.28□□□□□ -1.88
VPS8-215ENST00000460158 A4D1N5 150 aa3.28□□□□□ -1.88
VPS8-215ENST00000460158 CTAGE15A4D2H0 777 aa3.28□□□□□ -1.88
VPS8-215ENST00000460158 LRRIQ4A6NIV6 560 aa3.28□□□□□ -1.88
VPS8-215ENST00000460158 HNRNPCL2B2RXH8 293 aa3.28□□□□□ -1.88
VPS8-215ENST00000460158 DAB1O75553 588 aa3.28□□□□□ -1.88
VPS8-215ENST00000460158 BCAS2O75934 225 aaPredicted RBP3.28□□□□□ -1.88
VPS8-215ENST00000460158 TRIM16O95361 564 aa3.28□□□□□ -1.88
VPS8-215ENST00000460158 PMS2P2O95744 297 aa3.28□□□□□ -1.88
VPS8-215ENST00000460158 TPOP07202 933 aa3.28□□□□□ -1.88
VPS8-215ENST00000460158 SRPRAP08240 638 aaKnown RBP3.28□□□□□ -1.88
VPS8-215ENST00000460158 RHOXF2BP0C7M4 288 aa3.28□□□□□ -1.88
VPS8-215ENST00000460158 CTAGE8P0CG41 777 aa3.28□□□□□ -1.88
VPS8-215ENST00000460158 TYMPP19971 482 aa3.28□□□□□ -1.88
VPS8-215ENST00000460158 ADSSP30520 456 aa3.28□□□□□ -1.88
VPS8-215ENST00000460158 GDI1P31150 447 aa3.28□□□□□ -1.88
VPS8-215ENST00000460158 CCKARP32238 428 aa3.28□□□□□ -1.88
VPS8-215ENST00000460158 GNL1P36915 607 aaPredicted RBP3.28□□□□□ -1.88
VPS8-215ENST00000460158 HSD17B4P51659 736 aa3.28□□□□□ -1.88
VPS8-215ENST00000460158 TAS2R38P59533 333 aa3.28□□□□□ -1.88
VPS8-215ENST00000460158 PSMC6P62333 389 aa3.28□□□□□ -1.88
VPS8-215ENST00000460158 ECT2LQ008S8 904 aa3.28□□□□□ -1.88
VPS8-215ENST00000460158 GBE1Q04446 702 aa3.28□□□□□ -1.88
VPS8-215ENST00000460158 GABPB1Q06547 395 aaPredicted RBP3.28□□□□□ -1.88
VPS8-215ENST00000460158 CUL2Q13617 745 aa3.28□□□□□ -1.88
VPS8-215ENST00000460158 PTK6Q13882 451 aa3.28□□□□□ -1.88
VPS8-215ENST00000460158 KEAP1Q14145 624 aa3.28□□□□□ -1.88
VPS8-215ENST00000460158 NTRK2Q16620 822 aa3.28□□□□□ -1.88
VPS8-215ENST00000460158 DECR1Q16698 335 aa3.28□□□□□ -1.88
VPS8-215ENST00000460158 PCGF3Q3KNV8 242 aa3.28□□□□□ -1.88
VPS8-215ENST00000460158 NHSL2Q5HYW2 709 aa3.28□□□□□ -1.88
VPS8-215ENST00000460158 RAB41Q5JT25 222 aa3.28□□□□□ -1.88
VPS8-215ENST00000460158 TEX35Q5T0J7 233 aa3.28□□□□□ -1.88
VPS8-215ENST00000460158 DCST1Q5T197 706 aa3.28□□□□□ -1.88
VPS8-215ENST00000460158 NSUN5P2Q63ZY6 315 aa3.28□□□□□ -1.88
VPS8-215ENST00000460158 NADSYN1Q6IA69 706 aa3.28□□□□□ -1.88
VPS8-215ENST00000460158 ETFRF1Q6IPR1 90 aa3.28□□□□□ -1.88
VPS8-215ENST00000460158 TRAT1Q6PIZ9 186 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms