RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.68■□□□□ 0.1
COL7A1-203ENST00000459756 SYTL3Q4VX76 610 aa15.68■□□□□ 0.1
COL7A1-203ENST00000459756 ARMC3Q5W041 872 aa15.68■□□□□ 0.1
COL7A1-203ENST00000459756 TTC27Q6P3X3 843 aa15.68■□□□□ 0.1
COL7A1-203ENST00000459756 LRRC8BQ6P9F7 803 aa15.68■□□□□ 0.1
COL7A1-203ENST00000459756 TIPARPQ7Z3E1 657 aaKnown RBP15.68■□□□□ 0.1
COL7A1-203ENST00000459756 BPHLQ86WA6 291 aaPredicted RBP15.68■□□□□ 0.1
COL7A1-203ENST00000459756 RASGRP3Q8IV61 690 aa15.68■□□□□ 0.1
COL7A1-203ENST00000459756 ESX1Q8N693 406 aa15.68■□□□□ 0.1
COL7A1-203ENST00000459756 EFHD1Q9BUP0 239 aa15.68■□□□□ 0.1
COL7A1-203ENST00000459756 TSSK1BQ9BXA7 367 aa15.68■□□□□ 0.1
COL7A1-203ENST00000459756 AP1M1Q9BXS5 423 aa15.68■□□□□ 0.1
COL7A1-203ENST00000459756 PDE7BQ9NP56 450 aa15.68■□□□□ 0.1
COL7A1-203ENST00000459756 TREX1Q9NSU2 369 aa15.68■□□□□ 0.1
COL7A1-203ENST00000459756 USP27XA6NNY8 438 aa15.67■□□□□ 0.1
COL7A1-203ENST00000459756 CD3EAPO15446 510 aaKnown RBP15.67■□□□□ 0.1
COL7A1-203ENST00000459756 ZBTB11O95625 1053 aaPredicted RBP15.67■□□□□ 0.1
COL7A1-203ENST00000459756 KRT14P02533 472 aa15.67■□□□□ 0.1
COL7A1-203ENST00000459756 POLR2CP19387 275 aaPredicted RBP15.67■□□□□ 0.1
COL7A1-203ENST00000459756 KPNA2P52292 529 aaKnown RBP15.67■□□□□ 0.1
COL7A1-203ENST00000459756 ACY1Q03154 408 aa15.67■□□□□ 0.1
COL7A1-203ENST00000459756 TUBB3Q13509 450 aa15.67■□□□□ 0.1
COL7A1-203ENST00000459756 SEMA3AQ14563 771 aa15.67■□□□□ 0.1
COL7A1-203ENST00000459756 KCNJ11Q14654 390 aa15.67■□□□□ 0.1
COL7A1-203ENST00000459756 TRIP13Q15645 432 aaPredicted RBP15.67■□□□□ 0.1
COL7A1-203ENST00000459756 PPP1R3BQ86XI6 285 aa15.67■□□□□ 0.1
COL7A1-203ENST00000459756 SLC35F6Q8N357 371 aa15.67■□□□□ 0.1
COL7A1-203ENST00000459756 MPP5Q8N3R9 675 aa15.67■□□□□ 0.1
COL7A1-203ENST00000459756 PHC3Q8NDX5 983 aa15.67■□□□□ 0.1
COL7A1-203ENST00000459756 OR52E1Q8NGJ3 308 aa15.67■□□□□ 0.1
COL7A1-203ENST00000459756 ACTRT1Q8TDG2 376 aa15.67■□□□□ 0.1
COL7A1-203ENST00000459756 ELMO2Q96JJ3 720 aa15.67■□□□□ 0.1
COL7A1-203ENST00000459756 FCRL4Q96PJ5 515 aa15.67■□□□□ 0.1
COL7A1-203ENST00000459756 OSBPL9Q96SU4 736 aa15.67■□□□□ 0.1
COL7A1-203ENST00000459756 KIFC1Q9BW19 673 aa15.67■□□□□ 0.1
COL7A1-203ENST00000459756 GPN2Q9H9Y4 310 aaPredicted RBP15.67■□□□□ 0.1
COL7A1-203ENST00000459756 MRM3Q9HC36 420 aaKnown RBP15.67■□□□□ 0.1
COL7A1-203ENST00000459756 POMT2Q9UKY4 750 aa15.67■□□□□ 0.1
COL7A1-203ENST00000459756 RARRES3Q9UL19 164 aa15.67■□□□□ 0.1
COL7A1-203ENST00000459756 TCRBV7S3A2A0A539 114 aa15.66■□□□□ 0.1
COL7A1-203ENST00000459756 SLC5A10A0PJK1 596 aa15.66■□□□□ 0.1
COL7A1-203ENST00000459756 BHMG1C9JSJ3 638 aaPredicted RBP15.66■□□□□ 0.1
COL7A1-203ENST00000459756 CES2O00748 559 aa15.66■□□□□ 0.1
COL7A1-203ENST00000459756 SPAG6O75602 509 aa15.66■□□□□ 0.1
COL7A1-203ENST00000459756 FOLR1P15328 257 aa15.66■□□□□ 0.1
COL7A1-203ENST00000459756 ZNF28P17035 718 aa15.66■□□□□ 0.1
COL7A1-203ENST00000459756 MGAT1P26572 445 aa15.66■□□□□ 0.1
COL7A1-203ENST00000459756 ACADLP28330 430 aa15.66■□□□□ 0.1
COL7A1-203ENST00000459756 NMBRP28336 390 aa15.66■□□□□ 0.1
COL7A1-203ENST00000459756 COILP38432 576 aaPredicted RBP15.66■□□□□ 0.1
COL7A1-203ENST00000459756 STAT5AP42229 794 aa15.66■□□□□ 0.1
COL7A1-203ENST00000459756 ARCN1P48444 511 aaKnown RBP15.66■□□□□ 0.1
COL7A1-203ENST00000459756 VPS41P49754 854 aa15.66■□□□□ 0.1
COL7A1-203ENST00000459756 KCNAB1Q14722 419 aa15.66■□□□□ 0.1
COL7A1-203ENST00000459756 BRD3Q15059 726 aa15.66■□□□□ 0.1
COL7A1-203ENST00000459756 TMTC4Q5T4D3 741 aa15.66■□□□□ 0.1
COL7A1-203ENST00000459756 CCDC137Q6PK04 289 aaKnown RBP15.66■□□□□ 0.1
COL7A1-203ENST00000459756 C6orf15Q6UXA7 325 aaPredicted RBP15.66■□□□□ 0.1
COL7A1-203ENST00000459756 AMIGO1Q86WK6 493 aa15.66■□□□□ 0.1
COL7A1-203ENST00000459756 D2HGDHQ8N465 521 aa15.66■□□□□ 0.1
COL7A1-203ENST00000459756 COG1Q8WTW3 980 aa15.66■□□□□ 0.1
COL7A1-203ENST00000459756 SLC45A3Q96JT2 553 aa15.66■□□□□ 0.1
COL7A1-203ENST00000459756 HGH1Q9BTY7 390 aa15.66■□□□□ 0.1
COL7A1-203ENST00000459756 CARD6Q9BX69 1037 aa15.66■□□□□ 0.1
COL7A1-203ENST00000459756 SLC12A9Q9BXP2 914 aa15.66■□□□□ 0.1
COL7A1-203ENST00000459756 C1GALT1Q9NS00 363 aa15.66■□□□□ 0.1
COL7A1-203ENST00000459756 SYBUQ9NX95 663 aa15.66■□□□□ 0.1
COL7A1-203ENST00000459756 MARCH4Q9P2E8 410 aaPredicted RBP15.66■□□□□ 0.1
COL7A1-203ENST00000459756 POLG2Q9UHN1 485 aa15.66■□□□□ 0.1
COL7A1-203ENST00000459756 ASF1AQ9Y294 204 aa15.66■□□□□ 0.1
COL7A1-203ENST00000459756 PIEZO2Q9H5I5 2752 aa15.65■□□□□ 0.1
COL7A1-203ENST00000459756 LOC101059948A0A1B0GTJ6 334 aa15.65■□□□□ 0.1
COL7A1-203ENST00000459756 GSAPA4D1B5 854 aa15.65■□□□□ 0.1
COL7A1-203ENST00000459756 ZNF891A8MT65 544 aaPredicted RBP15.65■□□□□ 0.1
COL7A1-203ENST00000459756 PRMT5O14744 637 aaPredicted RBP15.65■□□□□ 0.1
COL7A1-203ENST00000459756 KIAA0754O94854 1291 aa15.65■□□□□ 0.1
COL7A1-203ENST00000459756 PRB1P04280 392 aa15.65■□□□□ 0.1
COL7A1-203ENST00000459756 EBLN1P0CF75 366 aa15.65■□□□□ 0.1
COL7A1-203ENST00000459756 TUBB4BP68371 445 aa15.65■□□□□ 0.1
COL7A1-203ENST00000459756 C19orf57Q0VDD7 668 aa15.65■□□□□ 0.1
COL7A1-203ENST00000459756 PRKG2Q13237 762 aa15.65■□□□□ 0.1
COL7A1-203ENST00000459756 TUBB2AQ13885 445 aa15.65■□□□□ 0.1
COL7A1-203ENST00000459756 LDB1Q86U70 411 aaPredicted RBP15.65■□□□□ 0.1
COL7A1-203ENST00000459756 LRRC6Q86X45 466 aa15.65■□□□□ 0.1
COL7A1-203ENST00000459756 TBC1D21Q8IYX1 336 aa15.65■□□□□ 0.1
COL7A1-203ENST00000459756 OR5AR1Q8NGP9 310 aa15.65■□□□□ 0.1
COL7A1-203ENST00000459756 ASZ1Q8WWH4 475 aa15.65■□□□□ 0.1
COL7A1-203ENST00000459756 STAMBPL1Q96FJ0 436 aa15.65■□□□□ 0.1
COL7A1-203ENST00000459756 TUBB2BQ9BVA1 445 aa15.65■□□□□ 0.1
COL7A1-203ENST00000459756 FGF21Q9NSA1 209 aa15.65■□□□□ 0.1
COL7A1-203ENST00000459756 LNPEPQ9UIQ6 1025 aa15.65■□□□□ 0.1
COL7A1-203ENST00000459756 SNX12Q9UMY4 172 aa15.65■□□□□ 0.1
COL7A1-203ENST00000459756 SOX13Q9UN79 622 aa15.65■□□□□ 0.1
COL7A1-203ENST00000459756 BTRCQ9Y297 605 aa15.65■□□□□ 0.1
COL7A1-203ENST00000459756 CFAP46Q8IYW2 2715 aa15.65■□□□□ 0.1
COL7A1-203ENST00000459756 GOLGA6L10A0A0M3HER8 536 aa15.64■□□□□ 0.09
COL7A1-203ENST00000459756 C2orf74A8MZ97 194 aa15.64■□□□□ 0.09
COL7A1-203ENST00000459756 BTN3A3O00478 584 aa15.64■□□□□ 0.09
COL7A1-203ENST00000459756 BTN3A1O00481 513 aa15.64■□□□□ 0.09
COL7A1-203ENST00000459756 KDM1AO60341 852 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms