RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 TUBA1CQ9BQE3 449 aa13.89□□□□□ -0.19
SCFD1-203ENST00000458591 MARCH5Q9NX47 278 aa13.89□□□□□ -0.19
SCFD1-203ENST00000458591 PAIP2BQ9ULR5 123 aaKnown RBP13.89□□□□□ -0.19
SCFD1-203ENST00000458591 PLXNA3P51805 1871 aa13.89□□□□□ -0.19
SCFD1-203ENST00000458591 C1orf232A0A0U1RR37 186 aa13.89□□□□□ -0.19
SCFD1-203ENST00000458591 TYW5A2RUC4 315 aaKnown RBP13.89□□□□□ -0.19
SCFD1-203ENST00000458591 AREL1O15033 823 aa13.89□□□□□ -0.19
SCFD1-203ENST00000458591 MITFO75030 526 aaPredicted RBP13.89□□□□□ -0.19
SCFD1-203ENST00000458591 DEAF1O75398 565 aaPredicted RBP13.89□□□□□ -0.19
SCFD1-203ENST00000458591 PRSS23O95084 383 aa13.89□□□□□ -0.19
SCFD1-203ENST00000458591 CCNA2P20248 432 aa13.89□□□□□ -0.19
SCFD1-203ENST00000458591 PLA2G16P53816 162 aa13.89□□□□□ -0.19
SCFD1-203ENST00000458591 PHC1P78364 1004 aa13.89□□□□□ -0.19
SCFD1-203ENST00000458591 CD47Q08722 323 aa13.89□□□□□ -0.19
SCFD1-203ENST00000458591 CRY1Q16526 586 aa13.89□□□□□ -0.19
SCFD1-203ENST00000458591 FAM98BQ52LJ0 330 aaKnown RBP13.89□□□□□ -0.19
SCFD1-203ENST00000458591 GCNT7Q6ZNI0 430 aa13.89□□□□□ -0.19
SCFD1-203ENST00000458591 THAP5Q7Z6K1 395 aa13.89□□□□□ -0.19
SCFD1-203ENST00000458591 ANKRD46Q86W74 232 aa13.89□□□□□ -0.19
SCFD1-203ENST00000458591 RASAL3Q86YV0 1011 aa13.89□□□□□ -0.19
SCFD1-203ENST00000458591 SOCS4Q8WXH5 440 aa13.89□□□□□ -0.19
SCFD1-203ENST00000458591 KCNJ9Q92806 393 aa13.89□□□□□ -0.19
SCFD1-203ENST00000458591 TM6SF2Q9BZW4 377 aa13.89□□□□□ -0.19
SCFD1-203ENST00000458591 RNF38Q9H0F5 515 aa13.89□□□□□ -0.19
SCFD1-203ENST00000458591 PAK1IP1Q9NWT1 392 aaPredicted RBP13.89□□□□□ -0.19
SCFD1-203ENST00000458591 KLQ9UEF7 1012 aa13.89□□□□□ -0.19
SCFD1-203ENST00000458591 UPK3BL1B0FP48 263 aa13.88□□□□□ -0.19
SCFD1-203ENST00000458591 UPK3BL2E5RIL1 263 aa13.88□□□□□ -0.19
SCFD1-203ENST00000458591 H0YAE9 185 aa13.88□□□□□ -0.19
SCFD1-203ENST00000458591 GNGT2O14610 69 aa13.88□□□□□ -0.19
SCFD1-203ENST00000458591 COCHO43405 550 aa13.88□□□□□ -0.19
SCFD1-203ENST00000458591 SEC14L2O76054 403 aa13.88□□□□□ -0.19
SCFD1-203ENST00000458591 FUCA1P04066 466 aa13.88□□□□□ -0.19
SCFD1-203ENST00000458591 ZDHHC11BP0C7U3 371 aa13.88□□□□□ -0.19
SCFD1-203ENST00000458591 PORP16435 677 aaPredicted RBP13.88□□□□□ -0.19
SCFD1-203ENST00000458591 CORO1AP31146 461 aaKnown RBP13.88□□□□□ -0.19
SCFD1-203ENST00000458591 ATP5C1P36542 298 aaKnown RBP13.88□□□□□ -0.19
SCFD1-203ENST00000458591 CDH4P55283 916 aa13.88□□□□□ -0.19
SCFD1-203ENST00000458591 TPD52P55327 224 aaPredicted RBP13.88□□□□□ -0.19
SCFD1-203ENST00000458591 CYP4F3Q08477 520 aa13.88□□□□□ -0.19
SCFD1-203ENST00000458591 ILF2Q12905 390 aaKnown RBP13.88□□□□□ -0.19
SCFD1-203ENST00000458591 KCNAB2Q13303 367 aa13.88□□□□□ -0.19
SCFD1-203ENST00000458591 C16orf87Q6PH81 154 aa13.88□□□□□ -0.19
SCFD1-203ENST00000458591 TRAF7Q6Q0C0 670 aa13.88□□□□□ -0.19
SCFD1-203ENST00000458591 EFL1Q7Z2Z2 1120 aaKnown RBP13.88□□□□□ -0.19
SCFD1-203ENST00000458591 CHDHQ8NE62 594 aaPredicted RBP13.88□□□□□ -0.19
SCFD1-203ENST00000458591 ZNF548Q8NEK5 533 aaPredicted RBP13.88□□□□□ -0.19
SCFD1-203ENST00000458591 NETO1Q8TDF5 533 aa13.88□□□□□ -0.19
SCFD1-203ENST00000458591 BCL7CQ8WUZ0 217 aaPredicted RBP13.88□□□□□ -0.19
SCFD1-203ENST00000458591 SLC13A3Q8WWT9 602 aa13.88□□□□□ -0.19
SCFD1-203ENST00000458591 SLC47A1Q96FL8 570 aa13.88□□□□□ -0.19
SCFD1-203ENST00000458591 CNDP2Q96KP4 475 aaKnown RBP13.88□□□□□ -0.19
SCFD1-203ENST00000458591 EGFL8Q99944 293 aa13.88□□□□□ -0.19
SCFD1-203ENST00000458591 RRAGCQ9HB90 399 aa13.88□□□□□ -0.19
SCFD1-203ENST00000458591 SLC30A1Q9Y6M5 507 aa13.88□□□□□ -0.19
SCFD1-203ENST00000458591 ANKRD36A6QL64 1941 aa13.88□□□□□ -0.19
SCFD1-203ENST00000458591 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.88□□□□□ -0.19
SCFD1-203ENST00000458591 K7EPI3 171 aa13.88□□□□□ -0.19
SCFD1-203ENST00000458591 ARNTLO00327 626 aa13.88□□□□□ -0.19
SCFD1-203ENST00000458591 TOR1BO14657 336 aa13.88□□□□□ -0.19
SCFD1-203ENST00000458591 XPNPEP2O43895 674 aa13.88□□□□□ -0.19
SCFD1-203ENST00000458591 HS6ST1O60243 411 aa13.88□□□□□ -0.19
SCFD1-203ENST00000458591 INMTO95050 263 aa13.88□□□□□ -0.19
SCFD1-203ENST00000458591 SLC11A1P49279 550 aa13.88□□□□□ -0.19
SCFD1-203ENST00000458591 FKBP1BP68106 108 aa13.88□□□□□ -0.19
SCFD1-203ENST00000458591 ZNF177Q13360 481 aaPredicted RBP13.88□□□□□ -0.19
SCFD1-203ENST00000458591 BROXQ5VW32 411 aa13.88□□□□□ -0.19
SCFD1-203ENST00000458591 PTRHD1Q6GMV3 140 aaKnown RBP13.88□□□□□ -0.19
SCFD1-203ENST00000458591 CCSAPQ6IQ19 270 aaPredicted RBP13.88□□□□□ -0.19
SCFD1-203ENST00000458591 CXorf57Q6NSI4 855 aaKnown RBP13.88□□□□□ -0.19
SCFD1-203ENST00000458591 NECAB2Q7Z6G3 386 aa13.88□□□□□ -0.19
SCFD1-203ENST00000458591 GALNT5Q7Z7M9 940 aa13.88□□□□□ -0.19
SCFD1-203ENST00000458591 GALNT10Q86SR1 603 aa13.88□□□□□ -0.19
SCFD1-203ENST00000458591 SERPINA9Q86WD7 417 aa13.88□□□□□ -0.19
SCFD1-203ENST00000458591 IFNL1Q8IU54 200 aa13.88□□□□□ -0.19
SCFD1-203ENST00000458591 ZDHHC13Q8IUH4 622 aa13.88□□□□□ -0.19
SCFD1-203ENST00000458591 CNIH3Q8TBE1 160 aa13.88□□□□□ -0.19
SCFD1-203ENST00000458591 FAM162AQ96A26 154 aa13.88□□□□□ -0.19
SCFD1-203ENST00000458591 GPR63Q9BZJ6 419 aa13.88□□□□□ -0.19
SCFD1-203ENST00000458591 ACTR8Q9H981 624 aa13.88□□□□□ -0.19
SCFD1-203ENST00000458591 PALMDQ9NP74 551 aa13.88□□□□□ -0.19
SCFD1-203ENST00000458591 HPS4Q9NQG7 708 aa13.88□□□□□ -0.19
SCFD1-203ENST00000458591 COMMD8Q9NX08 183 aa13.88□□□□□ -0.19
SCFD1-203ENST00000458591 VNN3Q9NY84 501 aa13.88□□□□□ -0.19
SCFD1-203ENST00000458591 IL17CQ9P0M4 197 aa13.88□□□□□ -0.19
SCFD1-203ENST00000458591 WARS2Q9UGM6 360 aaKnown RBP13.88□□□□□ -0.19
SCFD1-203ENST00000458591 DHRS7Q9Y394 339 aa13.88□□□□□ -0.19
SCFD1-203ENST00000458591 TRIM64BA6NI03 449 aa13.87□□□□□ -0.19
SCFD1-203ENST00000458591 LOC730098B7Z3J9 87 aa13.87□□□□□ -0.19
SCFD1-203ENST00000458591 INPPL1O15357 1258 aa13.87□□□□□ -0.19
SCFD1-203ENST00000458591 SEPT4O43236 478 aa13.87□□□□□ -0.19
SCFD1-203ENST00000458591 PARNO95453 639 aaKnown RBP13.87□□□□□ -0.19
SCFD1-203ENST00000458591 OCM2P0CE71 109 aa13.87□□□□□ -0.19
SCFD1-203ENST00000458591 OCMP0CE72 109 aaPredicted RBP13.87□□□□□ -0.19
SCFD1-203ENST00000458591 MYCLP1P12525 358 aaPredicted RBP13.87□□□□□ -0.19
SCFD1-203ENST00000458591 GPR17Q13304 367 aa13.87□□□□□ -0.19
SCFD1-203ENST00000458591 PCBP2Q15366 365 aaKnown RBP eCLIP13.87□□□□□ -0.191e-6■■■□□ 18.2
SCFD1-203ENST00000458591 MOGQ16653 247 aa13.87□□□□□ -0.19
SCFD1-203ENST00000458591 C5orf22Q49AR2 442 aa13.87□□□□□ -0.19
SCFD1-203ENST00000458591 GTF2IRD2BQ6EKJ0 949 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms