RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 LAPTM4BQ86VI4 370 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 KCNMB4Q86W47 210 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 ZC3HC1Q86WB0 502 aaKnown RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 CBWD2Q8IUF1 395 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 ZNF557Q8N988 423 aaPredicted RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 KIAA0895Q8NCT3 520 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 OR10R2Q8NGX6 335 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 LNX1Q8TBB1 728 aaPredicted RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 BPIFB1Q8TDL5 484 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 CABLES1Q8TDN4 633 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 SCARB1Q8WTV0 552 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 SMAP2Q8WU79 429 aaPredicted RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 ST8SIA4Q92187 359 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 EXT2Q93063 718 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 PPP1R14AQ96A00 147 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 TMEM80Q96HE8 168 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 ZFP42Q96MM3 310 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 CDC6Q99741 560 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 SPATA5L1Q9BVQ7 753 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 PLA2G12BQ9BX93 195 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 LRRC3Q9BY71 257 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 NKX6-2Q9C056 277 aaPredicted RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 PITHD1Q9GZP4 211 aaPredicted RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 TUBB1Q9H4B7 451 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 TIGARQ9NQ88 270 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 TBC1D22BQ9NU19 505 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 NDFIP2Q9NV92 336 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 MTPAPQ9NVV4 582 aaKnown RBP eCLIP2.17□□□□□ -2.06
USP53-202ENST00000450251 SIRPGQ9P1W8 387 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 UXTQ9UBK9 157 aaPredicted RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 GNG8Q9UK08 70 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 RNF112Q9ULX5 631 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 PLA2G4CQ9UP65 541 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 EXOSC1Q9Y3B2 195 aaKnown RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 NR2E1Q9Y466 385 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 A0A075B6Q4 140 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 A0A0D9SG52 128 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 A0A0U1RQJ8 604 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 A0A1B0GVC2 190 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 TCRBV9S1A1TA0A576 114 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 LRRN3E7EW58 273 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 EI24O14681 340 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 SLC9A3R1O14745 358 aaPredicted RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 PMM2O15305 246 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 KLRC4O43908 158 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 FADS1O60427 444 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 PPM1BO75688 479 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 OAZ2O95190 189 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 PDE8BO95263 885 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 AP2A1O95782 977 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 PLATP00750 562 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 IFNGP01579 166 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 MT-ND2P03891 347 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 TFAP2AP05549 437 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 PAICSP22234 425 aaKnown RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 HIBADHP31937 336 aaKnown RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 CTNNB1P35222 781 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 MAPK8P45983 427 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 ATXN1P54253 815 aaKnown RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 SLC36A3Q495N2 470 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 RAB41Q5JT25 222 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 CERCAMQ5T4B2 595 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 ZBTB37Q5TC79 503 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 GRHL2Q6ISB3 625 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 NCEH1Q6PIU2 408 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 MACC1Q6ZN28 852 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 ZNF704Q6ZNC4 412 aaPredicted RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 CEP68Q76N32 757 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 FAM122BQ7Z309 247 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 FAM126BQ8IXS8 530 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 CADM3Q8N126 398 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 NATD1Q8N6N6 113 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 ARFGAP1Q8N6T3 406 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 PCDH20Q8N6Y1 951 aaKnown RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 MFSD9Q8NBP5 474 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 PSD4Q8NDX1 1056 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 OR1J4Q8NGS1 313 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 ZNF671Q8TAW3 534 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 THAP6Q8TBB0 222 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 DNAJB3Q8WWF6 145 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 TFAP2CQ92754 450 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 RPL3LQ92901 407 aaKnown RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 REPS1Q96D71 796 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 CHFRQ96EP1 664 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 ASIC4Q96FT7 647 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 FAM167AQ96KS9 214 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 WFIKKN1Q96NZ8 548 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 QRFPRQ96P65 431 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 AP1S3Q96PC3 154 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 CCNL2Q96S94 520 aaPredicted RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 RIT2Q99578 217 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 DOK1Q99704 481 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 KCNS3Q9BQ31 491 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 ZNF350Q9GZX5 532 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 SPNS1Q9H2V7 528 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 C12orf65Q9H3J6 166 aaKnown RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 LRRN3Q9H3W5 708 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 RGCCQ9H4X1 137 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 CASS4Q9NQ75 786 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 C1orf109Q9NX04 203 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms