RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 OR6C74A6NCV1 312 aa23.01■■□□□ 1.27
VARS-217ENST00000440048 BHMG1C9JSJ3 638 aaPredicted RBP23.01■■□□□ 1.27
VARS-217ENST00000440048 LIPCP11150 499 aa23.01■■□□□ 1.27
VARS-217ENST00000440048 PAMP19021 973 aa23.01■■□□□ 1.27
VARS-217ENST00000440048 ACADLP28330 430 aa23.01■■□□□ 1.27
VARS-217ENST00000440048 CSE1LP55060 971 aaKnown RBP23.01■■□□□ 1.27
VARS-217ENST00000440048 UCNP55089 124 aa23.01■■□□□ 1.27
VARS-217ENST00000440048 PLOD1Q02809 727 aaPredicted RBP23.01■■□□□ 1.27
VARS-217ENST00000440048 DCAF12Q5T6F0 453 aa23.01■■□□□ 1.27
VARS-217ENST00000440048 SDCCAG8Q86SQ7 713 aaPredicted RBP23.01■■□□□ 1.27
VARS-217ENST00000440048 KRT222Q8N1A0 295 aa23.01■■□□□ 1.27
VARS-217ENST00000440048 OR4E2Q8NGC2 313 aa23.01■■□□□ 1.27
VARS-217ENST00000440048 KLHL6Q8WZ60 621 aa23.01■■□□□ 1.27
VARS-217ENST00000440048 ZNF669Q96BR6 464 aaPredicted RBP23.01■■□□□ 1.27
VARS-217ENST00000440048 SIGLEC10Q96LC7 697 aa23.01■■□□□ 1.27
VARS-217ENST00000440048 RUNDC3BQ96NL0 473 aa23.01■■□□□ 1.27
VARS-217ENST00000440048 ASPSCR1Q9BZE9 553 aa23.01■■□□□ 1.27
VARS-217ENST00000440048 PRORYQ9H606 182 aa23.01■■□□□ 1.27
VARS-217ENST00000440048 RNF14Q9UBS8 474 aa23.01■■□□□ 1.27
VARS-217ENST00000440048 FASNP49327 2511 aaKnown RBP23■■□□□ 1.27
VARS-217ENST00000440048 RPS3P23396 243 aaKnown RBP eCLIP23■■□□□ 1.279e-7■■■■□ 19.3
VARS-217ENST00000440048 IVDP26440 423 aa23■■□□□ 1.27
VARS-217ENST00000440048 PRKG2Q13237 762 aa23■■□□□ 1.27
VARS-217ENST00000440048 DHX34Q14147 1143 aaKnown RBP23■■□□□ 1.27
VARS-217ENST00000440048 TYSND1Q2T9J0 566 aa23■■□□□ 1.27
VARS-217ENST00000440048 PTRHD1Q6GMV3 140 aaKnown RBP23■■□□□ 1.27
VARS-217ENST00000440048 SYDE1Q6ZW31 735 aaPredicted RBP23■■□□□ 1.27
VARS-217ENST00000440048 PCGF5Q86SE9 256 aa23■■□□□ 1.27
VARS-217ENST00000440048 TMEM135Q86UB9 458 aa23■■□□□ 1.27
VARS-217ENST00000440048 LRRC6Q86X45 466 aa23■■□□□ 1.27
VARS-217ENST00000440048 LCN9Q8WX39 176 aa23■■□□□ 1.27
VARS-217ENST00000440048 CTRCQ99895 268 aa23■■□□□ 1.27
VARS-217ENST00000440048 HGH1Q9BTY7 390 aa23■■□□□ 1.27
VARS-217ENST00000440048 APMAPQ9HDC9 416 aa23■■□□□ 1.27
VARS-217ENST00000440048 IL1RAPL1Q9NZN1 696 aa23■■□□□ 1.27
VARS-217ENST00000440048 SEMA5BQ9P283 1151 aa23■■□□□ 1.27
VARS-217ENST00000440048 GNPTGQ9UJJ9 305 aa23■■□□□ 1.27
VARS-217ENST00000440048 MAD1L1Q9Y6D9 718 aa23■■□□□ 1.27
VARS-217ENST00000440048 RPS6KL1Q9Y6S9 549 aa23■■□□□ 1.27
VARS-217ENST00000440048 LOC400499M0QZD8 3231 aa23■■□□□ 1.27
VARS-217ENST00000440048 IGHV5-51A0A0C4DH38 117 aa22.99■■□□□ 1.27
VARS-217ENST00000440048 UBA6A0AVT1 1052 aaPredicted RBP22.99■■□□□ 1.27
VARS-217ENST00000440048 IQCJ-SCHIP1C9J366 451 aaPredicted RBP22.99■■□□□ 1.27
VARS-217ENST00000440048 CCDC188H7C350 402 aa22.99■■□□□ 1.27
VARS-217ENST00000440048 GPC4O75487 556 aa22.99■■□□□ 1.27
VARS-217ENST00000440048 EIF3BP55884 814 aaKnown RBP22.99■■□□□ 1.27
VARS-217ENST00000440048 DR1Q01658 176 aa22.99■■□□□ 1.27
VARS-217ENST00000440048 HSPA14Q0VDF9 509 aa22.99■■□□□ 1.27
VARS-217ENST00000440048 DNTTIP2Q5QJE6 756 aaKnown RBP22.99■■□□□ 1.27
VARS-217ENST00000440048 IZUMO3Q5VZ72 239 aa22.99■■□□□ 1.27
VARS-217ENST00000440048 NEPROQ6NW34 567 aa22.99■■□□□ 1.27
VARS-217ENST00000440048 ARMC6Q6NXE6 501 aa22.99■■□□□ 1.27
VARS-217ENST00000440048 CEACAM20Q6UY09 585 aa22.99■■□□□ 1.27
VARS-217ENST00000440048 DTX1Q86Y01 620 aa22.99■■□□□ 1.27
VARS-217ENST00000440048 OR52E1Q8NGJ3 308 aa22.99■■□□□ 1.27
VARS-217ENST00000440048 OR5AR1Q8NGP9 310 aa22.99■■□□□ 1.27
VARS-217ENST00000440048 TCF12Q99081 682 aa22.99■■□□□ 1.27
VARS-217ENST00000440048 CD180Q99467 661 aa22.99■■□□□ 1.27
VARS-217ENST00000440048 NRTNQ99748 197 aa22.99■■□□□ 1.27
VARS-217ENST00000440048 MAP3K3Q99759 626 aa22.99■■□□□ 1.27
VARS-217ENST00000440048 SRMSQ9H3Y6 488 aa22.99■■□□□ 1.27
VARS-217ENST00000440048 TFB2MQ9H5Q4 396 aaKnown RBP22.99■■□□□ 1.27
VARS-217ENST00000440048 WDR70Q9NW82 654 aa22.99■■□□□ 1.27
VARS-217ENST00000440048 CDYLQ9Y232 598 aa22.99■■□□□ 1.27
VARS-217ENST00000440048 ASF1AQ9Y294 204 aa22.99■■□□□ 1.27
VARS-217ENST00000440048 ZCWPW2A0A1B0GU75 182 aa22.98■■□□□ 1.27
VARS-217ENST00000440048 STMND1H3BQB6 276 aa22.98■■□□□ 1.27
VARS-217ENST00000440048 POLR2CP19387 275 aaPredicted RBP22.98■■□□□ 1.27
VARS-217ENST00000440048 OGNP20774 298 aaKnown RBP22.98■■□□□ 1.27
VARS-217ENST00000440048 AOAHP28039 575 aa22.98■■□□□ 1.27
VARS-217ENST00000440048 TMPRSS3P57727 454 aa22.98■■□□□ 1.27
VARS-217ENST00000440048 SH3BP2P78314 561 aa22.98■■□□□ 1.27
VARS-217ENST00000440048 RNF187Q5TA31 235 aaPredicted RBP22.98■■□□□ 1.27
VARS-217ENST00000440048 HOOK3Q86VS8 718 aa22.98■■□□□ 1.27
VARS-217ENST00000440048 VRK3Q8IV63 474 aa22.98■■□□□ 1.27
VARS-217ENST00000440048 SLC22A15Q8IZD6 547 aa22.98■■□□□ 1.27
VARS-217ENST00000440048 ASZ1Q8WWH4 475 aa22.98■■□□□ 1.27
VARS-217ENST00000440048 UBXN4Q92575 508 aa22.98■■□□□ 1.27
VARS-217ENST00000440048 LPGAT1Q92604 370 aa22.98■■□□□ 1.27
VARS-217ENST00000440048 TEFMQ96QE5 360 aaKnown RBP22.98■■□□□ 1.27
VARS-217ENST00000440048 CPNE5Q9HCH3 593 aa22.98■■□□□ 1.27
VARS-217ENST00000440048 TLCD2A6NGC4 264 aa22.97■■□□□ 1.27
VARS-217ENST00000440048 POLR1CO15160 346 aaPredicted RBP22.97■■□□□ 1.27
VARS-217ENST00000440048 USP1O94782 785 aa22.97■■□□□ 1.27
VARS-217ENST00000440048 APOA4P06727 396 aa22.97■■□□□ 1.27
VARS-217ENST00000440048 NELFEP18615 380 aaKnown RBP22.97■■□□□ 1.27
VARS-217ENST00000440048 FMO4P31512 558 aa22.97■■□□□ 1.27
VARS-217ENST00000440048 KPNA2P52292 529 aaKnown RBP22.97■■□□□ 1.27
VARS-217ENST00000440048 ETF1P62495 437 aaKnown RBP22.97■■□□□ 1.27
VARS-217ENST00000440048 CXADRP78310 365 aa22.97■■□□□ 1.27
VARS-217ENST00000440048 FOXM1Q08050 763 aa22.97■■□□□ 1.27
VARS-217ENST00000440048 CTSL3PQ5NE16 218 aa22.97■■□□□ 1.27
VARS-217ENST00000440048 CENPUQ71F23 418 aa22.97■■□□□ 1.27
VARS-217ENST00000440048 CILP2Q8IUL8 1156 aa22.97■■□□□ 1.27
VARS-217ENST00000440048 TBC1D21Q8IYX1 336 aa22.97■■□□□ 1.27
VARS-217ENST00000440048 STAMBPL1Q96FJ0 436 aa22.97■■□□□ 1.27
VARS-217ENST00000440048 SLC41A2Q96JW4 573 aa22.97■■□□□ 1.27
VARS-217ENST00000440048 BIRC8Q96P09 236 aa22.97■■□□□ 1.27
VARS-217ENST00000440048 PANX3Q96QZ0 392 aa22.97■■□□□ 1.27
VARS-217ENST00000440048 ZPBPQ9BS86 351 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms