RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 GRIA2P42262 883 aa13.67□□□□□ -0.22
HOXC4-202ENST00000430889 GRIA3P42263 894 aa13.67□□□□□ -0.22
HOXC4-202ENST00000430889 SLC6A12P48065 614 aa13.67□□□□□ -0.22
HOXC4-202ENST00000430889 CAMK1Q14012 370 aa13.67□□□□□ -0.22
HOXC4-202ENST00000430889 NR6A1Q15406 480 aa13.67□□□□□ -0.22
HOXC4-202ENST00000430889 AP5B1Q2VPB7 878 aa13.67□□□□□ -0.22
HOXC4-202ENST00000430889 ARHGAP15Q53QZ3 475 aa13.67□□□□□ -0.22
HOXC4-202ENST00000430889 MTX3Q5HYI7 312 aa13.67□□□□□ -0.22
HOXC4-202ENST00000430889 RABL3Q5HYI8 236 aa13.67□□□□□ -0.22
HOXC4-202ENST00000430889 RNF220Q5VTB9 566 aa13.67□□□□□ -0.22
HOXC4-202ENST00000430889 NANOGP8Q6NSW7 305 aa13.67□□□□□ -0.22
HOXC4-202ENST00000430889 ARPINQ7Z6K5 226 aa13.67□□□□□ -0.22
HOXC4-202ENST00000430889 LEMD2Q8NC56 503 aa13.67□□□□□ -0.22
HOXC4-202ENST00000430889 POF1BQ8WVV4 589 aa13.67□□□□□ -0.22
HOXC4-202ENST00000430889 ASB11Q8WXH4 323 aa13.67□□□□□ -0.22
HOXC4-202ENST00000430889 MYLIPQ8WY64 445 aa13.67□□□□□ -0.22
HOXC4-202ENST00000430889 ZSWIM3Q96MP5 696 aa13.67□□□□□ -0.22
HOXC4-202ENST00000430889 TRAPPC9Q96Q05 1148 aa13.67□□□□□ -0.22
HOXC4-202ENST00000430889 HBEGFQ99075 208 aa13.67□□□□□ -0.22
HOXC4-202ENST00000430889 RAD9AQ99638 391 aa13.67□□□□□ -0.22
HOXC4-202ENST00000430889 EGFL8Q99944 293 aa13.67□□□□□ -0.22
HOXC4-202ENST00000430889 TRIM8Q9BZR9 551 aa13.67□□□□□ -0.22
HOXC4-202ENST00000430889 TRIM15Q9C019 465 aa13.67□□□□□ -0.22
HOXC4-202ENST00000430889 NANOGQ9H9S0 305 aa13.67□□□□□ -0.22
HOXC4-202ENST00000430889 INTS7Q9NVH2 962 aaKnown RBP13.67□□□□□ -0.22
HOXC4-202ENST00000430889 GFYI3L273 518 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 SLC28A1O00337 649 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 MANBAO00462 879 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 BNIP3LO60238 219 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 STK16O75716 305 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 C8GP07360 202 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 POU2F2P09086 479 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 HNRNPA1P09651 372 aaKnown RBP eCLIP13.66□□□□□ -0.22
HOXC4-202ENST00000430889 OR56A5P0C7T3 313 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 HTR1EP28566 365 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 CTNNB1P35222 781 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 POLR2LP62875 67 aaKnown RBP13.66□□□□□ -0.22
HOXC4-202ENST00000430889 NTHL1P78549 312 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 LIPEQ05469 1076 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 PPIGQ13427 754 aaKnown RBP eCLIP13.66□□□□□ -0.22
HOXC4-202ENST00000430889 GGTA1PQ4G0N0 100 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 LRRC73Q5JTD7 316 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 TMEM240Q5SV17 173 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 SLC2A7Q6PXP3 512 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 HSD11B1LQ7Z5J1 315 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 HID1Q8IV36 788 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 VRK3Q8IV63 474 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 CHERPQ8IWX8 916 aaKnown RBP13.66□□□□□ -0.22
HOXC4-202ENST00000430889 HOMEZQ8IX15 550 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 AHI1Q8N157 1196 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 PAPD5Q8NDF8 572 aaKnown RBP13.66□□□□□ -0.22
HOXC4-202ENST00000430889 HEPHQ9BQS7 1158 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 EFHD1Q9BUP0 239 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 FAM192AQ9GZU8 254 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 Q9H521 79 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 ALG2Q9H553 416 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 COQ10BQ9H8M1 238 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 FARSBQ9NSD9 589 aaKnown RBP13.66□□□□□ -0.22
HOXC4-202ENST00000430889 PKD2L2Q9NZM6 624 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 EGFL7Q9UHF1 273 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 PCDHGB4Q9UN71 923 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 RNF11Q9Y3C5 154 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 POLR3HQ9Y535 204 aaPredicted RBP13.66□□□□□ -0.22
HOXC4-202ENST00000430889 PCDHGB5Q9Y5G0 923 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 DHRS12A0PJE2 317 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 LOC730098B7Z3J9 87 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 NPIPB8E9PQR5 432 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 SLC16A5O15375 505 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 TIPRLO75663 272 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 CSPG5O95196 566 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 CTSLP07711 333 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 ANXA5P08758 320 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 CISD3P0C7P0 127 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 ATP1B2P14415 290 aaPredicted RBP13.66□□□□□ -0.22
HOXC4-202ENST00000430889 TIMP2P16035 220 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 EPCAMP16422 314 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 EPB42P16452 691 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 VARSP26640 1264 aaKnown RBP13.66□□□□□ -0.22
HOXC4-202ENST00000430889 PIK3CGP48736 1102 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 SP140Q13342 867 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 PLEKHS1Q5SXH7 462 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 HENMT1Q5T8I9 393 aaKnown RBP13.66□□□□□ -0.22
HOXC4-202ENST00000430889 NEK10Q6ZWH5 1172 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 LRRC70Q7Z2Q7 622 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 SPPL2CQ8IUH8 684 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 DNAJB14Q8TBM8 379 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 SLC29A1Q99808 456 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 ABCG8Q9H221 673 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 SEMA6AQ9H2E6 1030 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 SLC32A1Q9H598 525 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 ZNF696Q9H7X3 374 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 AGPAT4Q9NRZ5 378 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 ZMYM5Q9UJ78 669 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 SNX13Q9Y5W8 968 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 WNT6Q9Y6F9 365 aa13.66□□□□□ -0.22
HOXC4-202ENST00000430889 KIF26AQ9ULI4 1882 aaPredicted RBP13.65□□□□□ -0.22
HOXC4-202ENST00000430889 TTC34A8MYJ7 566 aa13.65□□□□□ -0.22
HOXC4-202ENST00000430889 UPK3BL1B0FP48 263 aa13.65□□□□□ -0.22
HOXC4-202ENST00000430889 UPK3BL2E5RIL1 263 aa13.65□□□□□ -0.22
HOXC4-202ENST00000430889 TXNDC9O14530 226 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms