RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 SLC8A3P57103 927 aa4.91□□□□□ -1.62
SFXN1-202ENST00000421887 CLDN2P57739 230 aa4.91□□□□□ -1.62
SFXN1-202ENST00000421887 CCL7P80098 99 aa4.91□□□□□ -1.62
SFXN1-202ENST00000421887 ECT2LQ008S8 904 aa4.91□□□□□ -1.62
SFXN1-202ENST00000421887 CDC20Q12834 499 aa4.91□□□□□ -1.62
SFXN1-202ENST00000421887 CNTN1Q12860 1018 aa4.91□□□□□ -1.62
SFXN1-202ENST00000421887 ALCAMQ13740 583 aa4.91□□□□□ -1.62
SFXN1-202ENST00000421887 PDE1CQ14123 709 aaPredicted RBP4.91□□□□□ -1.62
SFXN1-202ENST00000421887 PTK2BQ14289 1009 aa4.91□□□□□ -1.62
SFXN1-202ENST00000421887 FZD2Q14332 565 aa4.91□□□□□ -1.62
SFXN1-202ENST00000421887 HLXQ14774 488 aaPredicted RBP4.91□□□□□ -1.62
SFXN1-202ENST00000421887 ZNF699Q32M78 642 aa4.91□□□□□ -1.62
SFXN1-202ENST00000421887 GRAMD1BQ3KR37 738 aa4.91□□□□□ -1.62
SFXN1-202ENST00000421887 L1TD1Q5T7N2 865 aaKnown RBP4.91□□□□□ -1.62
SFXN1-202ENST00000421887 SCARA5Q6ZMJ2 495 aa4.91□□□□□ -1.62
SFXN1-202ENST00000421887 CLEC20AQ6ZU45 233 aa4.91□□□□□ -1.62
SFXN1-202ENST00000421887 STXBP4Q6ZWJ1 553 aa4.91□□□□□ -1.62
SFXN1-202ENST00000421887 HORMAD1Q86X24 394 aa4.91□□□□□ -1.62
SFXN1-202ENST00000421887 SFR1Q86XK3 245 aa4.91□□□□□ -1.62
SFXN1-202ENST00000421887 ZC3H3Q8IXZ2 948 aaKnown RBP4.91□□□□□ -1.62
SFXN1-202ENST00000421887 SLC35F3Q8IY50 421 aa4.91□□□□□ -1.62
SFXN1-202ENST00000421887 CACNA2D3Q8IZS8 1091 aa4.91□□□□□ -1.62
SFXN1-202ENST00000421887 SLC22A18ASQ8N1D0 253 aa4.91□□□□□ -1.62
SFXN1-202ENST00000421887 SDR16C5Q8N3Y7 309 aa4.91□□□□□ -1.62
SFXN1-202ENST00000421887 CARNMT1Q8N4J0 409 aa4.91□□□□□ -1.62
SFXN1-202ENST00000421887 ARL10Q8N8L6 244 aa4.91□□□□□ -1.62
SFXN1-202ENST00000421887 NRACQ8N912 160 aa4.91□□□□□ -1.62
SFXN1-202ENST00000421887 NECAB1Q8N987 351 aa4.91□□□□□ -1.62
SFXN1-202ENST00000421887 FIBINQ8TAL6 211 aa4.91□□□□□ -1.62
SFXN1-202ENST00000421887 RNF139Q8WU17 664 aa4.91□□□□□ -1.62
SFXN1-202ENST00000421887 CCDC127Q96BQ5 260 aa4.91□□□□□ -1.62
SFXN1-202ENST00000421887 CYFIP2Q96F07 1278 aa4.91□□□□□ -1.62
SFXN1-202ENST00000421887 TEKT5Q96M29 485 aa4.91□□□□□ -1.62
SFXN1-202ENST00000421887 TAAR9Q96RI9 348 aa4.91□□□□□ -1.62
SFXN1-202ENST00000421887 FIZ1Q96SL8 496 aa4.91□□□□□ -1.62
SFXN1-202ENST00000421887 DDX50Q9BQ39 737 aaKnown RBP4.91□□□□□ -1.62
SFXN1-202ENST00000421887 ELAC2Q9BQ52 826 aaKnown RBP4.91□□□□□ -1.62
SFXN1-202ENST00000421887 CBWD1Q9BRT8 395 aa4.91□□□□□ -1.62
SFXN1-202ENST00000421887 LRRN3Q9H3W5 708 aa4.91□□□□□ -1.62
SFXN1-202ENST00000421887 SERTAD4Q9NUC0 356 aa4.91□□□□□ -1.62
SFXN1-202ENST00000421887 EHD3Q9NZN3 535 aa4.91□□□□□ -1.62
SFXN1-202ENST00000421887 TBC1D7Q9P0N9 293 aa4.91□□□□□ -1.62
SFXN1-202ENST00000421887 APOBEC3BQ9UH17 382 aaKnown RBP4.91□□□□□ -1.62
SFXN1-202ENST00000421887 TAGLN3Q9UI15 199 aa4.91□□□□□ -1.62
SFXN1-202ENST00000421887 PROCRQ9UNN8 238 aa4.91□□□□□ -1.62
SFXN1-202ENST00000421887 DAAM1Q9Y4D1 1078 aa4.91□□□□□ -1.62
SFXN1-202ENST00000421887 PCDHGA9Q9Y5G4 932 aaKnown RBP4.91□□□□□ -1.62
SFXN1-202ENST00000421887 PCDHGA6Q9Y5G7 932 aa4.91□□□□□ -1.62
SFXN1-202ENST00000421887 PCDHGA3Q9Y5H0 932 aa4.91□□□□□ -1.62
SFXN1-202ENST00000421887 NAV3Q8IVL0 2385 aa4.91□□□□□ -1.62
SFXN1-202ENST00000421887 CENPEQ02224 2701 aa4.9□□□□□ -1.62
SFXN1-202ENST00000421887 ZNF106Q9H2Y7 1883 aaKnown RBP4.9□□□□□ -1.62
SFXN1-202ENST00000421887 CCDC189A1A4V9 331 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 HEATR9A2RTY3 570 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 C10orf142B7Z368 130 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 LMO7DNF2Z398 122 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 FPGTO14772 594 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 CASC3O15234 703 aaKnown RBP4.9□□□□□ -1.63
SFXN1-202ENST00000421887 ZW10O43264 779 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 AP1G1O43747 822 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 JAK2O60674 1132 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 LDLRP01130 860 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 AMY1AP04745 511 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 CTSEP14091 401 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 GAP43P17677 238 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 TCN2P20062 427 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 NR1D1P20393 614 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 UGT1A3P35503 534 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 ETV5P41161 510 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 GPR3P46089 330 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 BLKP51451 505 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 NDST1P52848 882 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 MYL6P60660 151 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 YWHAGP61981 247 aaKnown RBP eCLIP4.9□□□□□ -1.63
SFXN1-202ENST00000421887 NUCB2P80303 420 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 SULT2A1Q06520 285 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 SGCGQ13326 291 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 BIRC3Q13489 604 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 C1orf61Q13536 156 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 ARHGEF7Q14155 803 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 ELOCQ15369 112 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 IL17AQ16552 155 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 MUM1Q2TAK8 710 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 FAXCQ5TGI0 409 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 RFWD3Q6PCD5 774 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 KYAT3Q6YP21 454 aaKnown RBP4.9□□□□□ -1.63
SFXN1-202ENST00000421887 GCNT7Q6ZNI0 430 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 TMPRSS9Q7Z410 1059 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 KDELC2Q7Z4H8 507 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 ABI3BPQ7Z7G0 1075 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 C11orf96Q7Z7L8 435 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 SCD5Q86SK9 330 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 CBWD2Q8IUF1 395 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 UNC45BQ8IWX7 931 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 MCEMP1Q8IX19 187 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 CMIPQ8IY22 773 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 MIER2Q8N344 545 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 C12orf29Q8N999 325 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 Q8N9G6 341 aaPredicted RBP4.9□□□□□ -1.63
SFXN1-202ENST00000421887 FAM184AQ8NB25 1140 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms