RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.01■□□□□ 0.15
LINC00404-201ENST00000418660 SLC5A10A0PJK1 596 aa16.01■□□□□ 0.15
LINC00404-201ENST00000418660 ZBTB11O95625 1053 aaPredicted RBP16.01■□□□□ 0.15
LINC00404-201ENST00000418660 FOLR1P15328 257 aa16.01■□□□□ 0.15
LINC00404-201ENST00000418660 ACADLP28330 430 aa16.01■□□□□ 0.15
LINC00404-201ENST00000418660 STAT5AP42229 794 aa16.01■□□□□ 0.15
LINC00404-201ENST00000418660 KPNA2P52292 529 aaKnown RBP16.01■□□□□ 0.15
LINC00404-201ENST00000418660 CRADDP78560 199 aa16.01■□□□□ 0.15
LINC00404-201ENST00000418660 TUBB3Q13509 450 aa16.01■□□□□ 0.15
LINC00404-201ENST00000418660 KCNAB1Q14722 419 aa16.01■□□□□ 0.15
LINC00404-201ENST00000418660 LINC00303Q3SY05 128 aa16.01■□□□□ 0.15
LINC00404-201ENST00000418660 LRRC8BQ6P9F7 803 aa16.01■□□□□ 0.15
LINC00404-201ENST00000418660 C6orf15Q6UXA7 325 aaPredicted RBP16.01■□□□□ 0.15
LINC00404-201ENST00000418660 ZNF843Q8N446 348 aa16.01■□□□□ 0.15
LINC00404-201ENST00000418660 D2HGDHQ8N465 521 aa16.01■□□□□ 0.15
LINC00404-201ENST00000418660 OR52E1Q8NGJ3 308 aa16.01■□□□□ 0.15
LINC00404-201ENST00000418660 EXTL1Q92935 676 aa16.01■□□□□ 0.15
LINC00404-201ENST00000418660 MAGOHBQ96A72 148 aaKnown RBP16.01■□□□□ 0.15
LINC00404-201ENST00000418660 MED8Q96G25 268 aa16.01■□□□□ 0.15
LINC00404-201ENST00000418660 MS4A14Q96JA4 679 aa16.01■□□□□ 0.15
LINC00404-201ENST00000418660 SLC45A3Q96JT2 553 aa16.01■□□□□ 0.15
LINC00404-201ENST00000418660 NAP1L3Q99457 506 aaPredicted RBP16.01■□□□□ 0.15
LINC00404-201ENST00000418660 TREX1Q9NSU2 369 aa16.01■□□□□ 0.15
LINC00404-201ENST00000418660 CATSPERZQ9NTU4 200 aa16.01■□□□□ 0.15
LINC00404-201ENST00000418660 POMT2Q9UKY4 750 aa16.01■□□□□ 0.15
LINC00404-201ENST00000418660 RARRES3Q9UL19 164 aa16.01■□□□□ 0.15
LINC00404-201ENST00000418660 ZNF891A8MT65 544 aaPredicted RBP16■□□□□ 0.15
LINC00404-201ENST00000418660 CD3EAPO15446 510 aaKnown RBP16■□□□□ 0.15
LINC00404-201ENST00000418660 KIAA0754O94854 1291 aa16■□□□□ 0.15
LINC00404-201ENST00000418660 KRT14P02533 472 aa16■□□□□ 0.15
LINC00404-201ENST00000418660 EBLN1P0CF75 366 aa16■□□□□ 0.15
LINC00404-201ENST00000418660 MGAT1P26572 445 aa16■□□□□ 0.15
LINC00404-201ENST00000418660 MAGEA6P43360 314 aa16■□□□□ 0.15
LINC00404-201ENST00000418660 TTPAP49638 278 aa16■□□□□ 0.15
LINC00404-201ENST00000418660 SARNPP82979 210 aaKnown RBP16■□□□□ 0.15
LINC00404-201ENST00000418660 GPS1Q13098 491 aa16■□□□□ 0.15
LINC00404-201ENST00000418660 PRKG2Q13237 762 aa16■□□□□ 0.15
LINC00404-201ENST00000418660 BRD3Q15059 726 aa16■□□□□ 0.15
LINC00404-201ENST00000418660 TRIP13Q15645 432 aaPredicted RBP16■□□□□ 0.15
LINC00404-201ENST00000418660 TBR1Q16650 682 aa16■□□□□ 0.15
LINC00404-201ENST00000418660 SYTL3Q4VX76 610 aa16■□□□□ 0.15
LINC00404-201ENST00000418660 TTC27Q6P3X3 843 aa16■□□□□ 0.15
LINC00404-201ENST00000418660 AMIGO1Q86WK6 493 aa16■□□□□ 0.15
LINC00404-201ENST00000418660 UNC5BQ8IZJ1 945 aa16■□□□□ 0.15
LINC00404-201ENST00000418660 GALNT6Q8NCL4 622 aa16■□□□□ 0.15
LINC00404-201ENST00000418660 ARHGAP9Q9BRR9 750 aa16■□□□□ 0.15
LINC00404-201ENST00000418660 HGH1Q9BTY7 390 aa16■□□□□ 0.15
LINC00404-201ENST00000418660 KIFC1Q9BW19 673 aa16■□□□□ 0.15
LINC00404-201ENST00000418660 CARD6Q9BX69 1037 aa16■□□□□ 0.15
LINC00404-201ENST00000418660 TSSK1BQ9BXA7 367 aa16■□□□□ 0.15
LINC00404-201ENST00000418660 SEMA4CQ9C0C4 833 aa16■□□□□ 0.15
LINC00404-201ENST00000418660 MRM3Q9HC36 420 aaKnown RBP16■□□□□ 0.15
LINC00404-201ENST00000418660 C1GALT1Q9NS00 363 aa16■□□□□ 0.15
LINC00404-201ENST00000418660 FGF21Q9NSA1 209 aa16■□□□□ 0.15
LINC00404-201ENST00000418660 MARCH4Q9P2E8 410 aaPredicted RBP16■□□□□ 0.15
LINC00404-201ENST00000418660 ASF1AQ9Y294 204 aa16■□□□□ 0.15
LINC00404-201ENST00000418660 RPS6KL1Q9Y6S9 549 aa16■□□□□ 0.15
LINC00404-201ENST00000418660 MGAQ8IWI9 3026 aa16■□□□□ 0.15
LINC00404-201ENST00000418660 TCRBV7S3A2A0A539 114 aa15.99■□□□□ 0.15
LINC00404-201ENST00000418660 GSAPA4D1B5 854 aa15.99■□□□□ 0.15
LINC00404-201ENST00000418660 BHMG1C9JSJ3 638 aaPredicted RBP15.99■□□□□ 0.15
LINC00404-201ENST00000418660 BTN3A3O00478 584 aa15.99■□□□□ 0.15
LINC00404-201ENST00000418660 BTN3A1O00481 513 aa15.99■□□□□ 0.15
LINC00404-201ENST00000418660 MT-ND3P03897 115 aa15.99■□□□□ 0.15
LINC00404-201ENST00000418660 CDH3P22223 829 aa15.99■□□□□ 0.15
LINC00404-201ENST00000418660 NMBRP28336 390 aa15.99■□□□□ 0.15
LINC00404-201ENST00000418660 PRDX3P30048 256 aaKnown RBP15.99■□□□□ 0.15
LINC00404-201ENST00000418660 CCR7P32248 378 aa15.99■□□□□ 0.15
LINC00404-201ENST00000418660 VPS41P49754 854 aa15.99■□□□□ 0.15
LINC00404-201ENST00000418660 KCNJ11Q14654 390 aa15.99■□□□□ 0.15
LINC00404-201ENST00000418660 CYP1B1Q16678 543 aa15.99■□□□□ 0.15
LINC00404-201ENST00000418660 KCTD19Q17RG1 926 aaPredicted RBP15.99■□□□□ 0.15
LINC00404-201ENST00000418660 TMTC4Q5T4D3 741 aa15.99■□□□□ 0.15
LINC00404-201ENST00000418660 FBXO38Q6PIJ6 1188 aa15.99■□□□□ 0.15
LINC00404-201ENST00000418660 NAPRTQ6XQN6 538 aa15.99■□□□□ 0.15
LINC00404-201ENST00000418660 LDB1Q86U70 411 aaPredicted RBP15.99■□□□□ 0.15
LINC00404-201ENST00000418660 TBC1D21Q8IYX1 336 aa15.99■□□□□ 0.15
LINC00404-201ENST00000418660 SLC35F6Q8N357 371 aa15.99■□□□□ 0.15
LINC00404-201ENST00000418660 EXD3Q8N9H8 876 aa15.99■□□□□ 0.15
LINC00404-201ENST00000418660 OR5AR1Q8NGP9 310 aa15.99■□□□□ 0.15
LINC00404-201ENST00000418660 STAMBPL1Q96FJ0 436 aa15.99■□□□□ 0.15
LINC00404-201ENST00000418660 PPM1MQ96MI6 270 aa15.99■□□□□ 0.15
LINC00404-201ENST00000418660 AP1M1Q9BXS5 423 aa15.99■□□□□ 0.15
LINC00404-201ENST00000418660 SYBUQ9NX95 663 aa15.99■□□□□ 0.15
LINC00404-201ENST00000418660 IL17BQ9UHF5 180 aa15.99■□□□□ 0.15
LINC00404-201ENST00000418660 POLG2Q9UHN1 485 aa15.99■□□□□ 0.15
LINC00404-201ENST00000418660 LNPEPQ9UIQ6 1025 aa15.99■□□□□ 0.15
LINC00404-201ENST00000418660 BTRCQ9Y297 605 aa15.99■□□□□ 0.15
LINC00404-201ENST00000418660 SLC9B1P1A6NJY1 282 aa15.98■□□□□ 0.15
LINC00404-201ENST00000418660 C2orf74A8MZ97 194 aa15.98■□□□□ 0.15
LINC00404-201ENST00000418660 PGRMC1O00264 195 aaKnown RBP15.98■□□□□ 0.15
LINC00404-201ENST00000418660 PRMT5O14744 637 aaPredicted RBP15.98■□□□□ 0.15
LINC00404-201ENST00000418660 TIAF1O95411 115 aa15.98■□□□□ 0.15
LINC00404-201ENST00000418660 CCNYL3P0C7X3 344 aa15.98■□□□□ 0.15
LINC00404-201ENST00000418660 ITGB6P18564 788 aa15.98■□□□□ 0.15
LINC00404-201ENST00000418660 SHMT2P34897 504 aa15.98■□□□□ 0.15
LINC00404-201ENST00000418660 COILP38432 576 aaPredicted RBP15.98■□□□□ 0.15
LINC00404-201ENST00000418660 TUBB4BP68371 445 aa15.98■□□□□ 0.15
LINC00404-201ENST00000418660 TUBB2AQ13885 445 aa15.98■□□□□ 0.15
LINC00404-201ENST00000418660 ARMC3Q5W041 872 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms