RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 ANKRD46Q86W74 232 aa14.21□□□□□ -0.13
HDAC9-208ENST00000417496 FBXO22Q8NEZ5 403 aa14.21□□□□□ -0.13
HDAC9-208ENST00000417496 FRS2Q8WU20 508 aa14.21□□□□□ -0.13
HDAC9-208ENST00000417496 ACDQ96AP0 544 aa14.21□□□□□ -0.13
HDAC9-208ENST00000417496 FBXL8Q96CD0 374 aa14.21□□□□□ -0.13
HDAC9-208ENST00000417496 CSF3RQ99062 836 aa14.21□□□□□ -0.13
HDAC9-208ENST00000417496 CLPBQ9H078 707 aa14.21□□□□□ -0.13
HDAC9-208ENST00000417496 ASB8Q9H765 288 aa14.21□□□□□ -0.13
HDAC9-208ENST00000417496 COMMD8Q9NX08 183 aa14.21□□□□□ -0.13
HDAC9-208ENST00000417496 TMEM161AQ9NX61 479 aa14.21□□□□□ -0.13
HDAC9-208ENST00000417496 LHX3Q9UBR4 397 aa14.21□□□□□ -0.13
HDAC9-208ENST00000417496 ANGPTL3Q9Y5C1 460 aa14.21□□□□□ -0.13
HDAC9-208ENST00000417496 PCDHB7Q9Y5E2 793 aa14.21□□□□□ -0.13
HDAC9-208ENST00000417496 PDE4DIPQ5VU43 2346 aa14.21□□□□□ -0.13
HDAC9-208ENST00000417496 CHD5Q8TDI0 1954 aa14.21□□□□□ -0.13
HDAC9-208ENST00000417496 H0YAE9 185 aa14.21□□□□□ -0.13
HDAC9-208ENST00000417496 GAPDHSO14556 408 aaPredicted RBP14.21□□□□□ -0.13
HDAC9-208ENST00000417496 GNGT2O14610 69 aa14.21□□□□□ -0.13
HDAC9-208ENST00000417496 GMNNO75496 209 aa14.21□□□□□ -0.13
HDAC9-208ENST00000417496 PRSS23O95084 383 aa14.21□□□□□ -0.13
HDAC9-208ENST00000417496 MBL2P11226 248 aaPredicted RBP14.21□□□□□ -0.13
HDAC9-208ENST00000417496 JAK1P23458 1154 aa14.21□□□□□ -0.13
HDAC9-208ENST00000417496 RGMBQ6NW40 437 aa14.21□□□□□ -0.13
HDAC9-208ENST00000417496 ZNF773Q6PK81 442 aa14.21□□□□□ -0.13
HDAC9-208ENST00000417496 ADAMTSL2Q86TH1 951 aa14.21□□□□□ -0.13
HDAC9-208ENST00000417496 RBM23Q86U06 439 aaKnown RBP14.21□□□□□ -0.13
HDAC9-208ENST00000417496 PCSK9Q8NBP7 692 aaKnown RBP14.21□□□□□ -0.13
HDAC9-208ENST00000417496 ZNF548Q8NEK5 533 aaPredicted RBP14.21□□□□□ -0.13
HDAC9-208ENST00000417496 OR13F1Q8NGS4 319 aa14.21□□□□□ -0.13
HDAC9-208ENST00000417496 ZNF420Q8TAQ5 688 aaPredicted RBP14.21□□□□□ -0.13
HDAC9-208ENST00000417496 GIPC3Q8TF64 312 aa14.21□□□□□ -0.13
HDAC9-208ENST00000417496 GLT1D1Q96MS3 346 aa14.21□□□□□ -0.13
HDAC9-208ENST00000417496 TTPALQ9BTX7 342 aa14.21□□□□□ -0.13
HDAC9-208ENST00000417496 C8orf4Q9NR00 106 aa14.21□□□□□ -0.13
HDAC9-208ENST00000417496 FAM118AQ9NWS6 357 aa14.21□□□□□ -0.13
HDAC9-208ENST00000417496 ZNF490Q9ULM2 529 aaPredicted RBP14.21□□□□□ -0.13
HDAC9-208ENST00000417496 GBF1Q92538 1859 aa14.21□□□□□ -0.13
HDAC9-208ENST00000417496 KRT87PA6NCN2 255 aa14.2□□□□□ -0.14
HDAC9-208ENST00000417496 LOC730098B7Z3J9 87 aa14.2□□□□□ -0.14
HDAC9-208ENST00000417496 PTGES3LE9PB15 166 aa14.2□□□□□ -0.14
HDAC9-208ENST00000417496 H7C0S8 307 aa14.2□□□□□ -0.14
HDAC9-208ENST00000417496 AREL1O15033 823 aa14.2□□□□□ -0.14
HDAC9-208ENST00000417496 RAD51BO15315 384 aa14.2□□□□□ -0.14
HDAC9-208ENST00000417496 SMAD6O43541 496 aaKnown RBP14.2□□□□□ -0.14
HDAC9-208ENST00000417496 TULP3O75386 442 aa14.2□□□□□ -0.14
HDAC9-208ENST00000417496 CLDN7O95471 211 aa14.2□□□□□ -0.14
HDAC9-208ENST00000417496 SEC24AO95486 1093 aa14.2□□□□□ -0.14
HDAC9-208ENST00000417496 S100BP04271 92 aaPredicted RBP14.2□□□□□ -0.14
HDAC9-208ENST00000417496 PGRP06401 933 aa14.2□□□□□ -0.14
HDAC9-208ENST00000417496 CRHBPP24387 322 aa14.2□□□□□ -0.14
HDAC9-208ENST00000417496 MAP4P27816 1152 aaKnown RBP14.2□□□□□ -0.14
HDAC9-208ENST00000417496 HMGCLP35914 325 aa14.2□□□□□ -0.14
HDAC9-208ENST00000417496 NAA20P61599 178 aa14.2□□□□□ -0.14
HDAC9-208ENST00000417496 CYP4F3Q08477 520 aa14.2□□□□□ -0.14
HDAC9-208ENST00000417496 NFATC3Q12968 1075 aa14.2□□□□□ -0.14
HDAC9-208ENST00000417496 LAPTM4AQ15012 233 aa14.2□□□□□ -0.14
HDAC9-208ENST00000417496 CTU2Q2VPK5 515 aaKnown RBP14.2□□□□□ -0.14
HDAC9-208ENST00000417496 ACBD5Q5T8D3 534 aaPredicted RBP14.2□□□□□ -0.14
HDAC9-208ENST00000417496 RGL4Q8IZJ4 473 aa14.2□□□□□ -0.14
HDAC9-208ENST00000417496 DGCR6LQ9BY27 220 aa14.2□□□□□ -0.14
HDAC9-208ENST00000417496 IL26Q9NPH9 171 aa14.2□□□□□ -0.14
HDAC9-208ENST00000417496 AASSQ9UDR5 926 aa14.2□□□□□ -0.14
HDAC9-208ENST00000417496 TNPO3Q9Y5L0 923 aaKnown RBP14.2□□□□□ -0.14
HDAC9-208ENST00000417496 MAN1A2O60476 641 aa14.2□□□□□ -0.14
HDAC9-208ENST00000417496 TBL1XO60907 577 aa14.2□□□□□ -0.14
HDAC9-208ENST00000417496 ULK1O75385 1050 aa14.2□□□□□ -0.14
HDAC9-208ENST00000417496 GALTP07902 379 aa14.2□□□□□ -0.14
HDAC9-208ENST00000417496 BMXP51813 675 aa14.2□□□□□ -0.14
HDAC9-208ENST00000417496 NEK2P51955 445 aa14.2□□□□□ -0.14
HDAC9-208ENST00000417496 MLLT10P55197 1068 aa14.2□□□□□ -0.14
HDAC9-208ENST00000417496 PHC1P78364 1004 aa14.2□□□□□ -0.14
HDAC9-208ENST00000417496 NKX3-2P78367 333 aa14.2□□□□□ -0.14
HDAC9-208ENST00000417496 BFSP2Q13515 415 aa14.2□□□□□ -0.14
HDAC9-208ENST00000417496 CPSF6Q16630 551 aaKnown RBP eCLIP14.2□□□□□ -0.14
HDAC9-208ENST00000417496 LDLRAP1Q5SW96 308 aa14.2□□□□□ -0.14
HDAC9-208ENST00000417496 THAP5Q7Z6K1 395 aa14.2□□□□□ -0.14
HDAC9-208ENST00000417496 ADGRG2Q8IZP9 1017 aa14.2□□□□□ -0.14
HDAC9-208ENST00000417496 NCLNQ969V3 563 aa14.2□□□□□ -0.14
HDAC9-208ENST00000417496 FAM162AQ96A26 154 aa14.2□□□□□ -0.14
HDAC9-208ENST00000417496 SLC47A1Q96FL8 570 aa14.2□□□□□ -0.14
HDAC9-208ENST00000417496 SLC22A12Q96S37 553 aa14.2□□□□□ -0.14
HDAC9-208ENST00000417496 MBOAT4Q96T53 435 aa14.2□□□□□ -0.14
HDAC9-208ENST00000417496 FEM1AQ9BSK4 669 aa14.2□□□□□ -0.14
HDAC9-208ENST00000417496 DPY30Q9C005 99 aa14.2□□□□□ -0.14
HDAC9-208ENST00000417496 ACTR8Q9H981 624 aa14.2□□□□□ -0.14
HDAC9-208ENST00000417496 HPS4Q9NQG7 708 aa14.2□□□□□ -0.14
HDAC9-208ENST00000417496 LATS2Q9NRM7 1088 aa14.2□□□□□ -0.14
HDAC9-208ENST00000417496 WWOXQ9NZC7 414 aa14.2□□□□□ -0.14
HDAC9-208ENST00000417496 INVSQ9Y283 1065 aa14.2□□□□□ -0.14
HDAC9-208ENST00000417496 CORINQ9Y5Q5 1042 aa14.2□□□□□ -0.14
HDAC9-208ENST00000417496 GMEB1Q9Y692 573 aa14.2□□□□□ -0.14
HDAC9-208ENST00000417496 C1orf232A0A0U1RR37 186 aa14.19□□□□□ -0.14
HDAC9-208ENST00000417496 NBNO60934 754 aa14.19□□□□□ -0.14
HDAC9-208ENST00000417496 HTR1AP08908 422 aa14.19□□□□□ -0.14
HDAC9-208ENST00000417496 HMGA1P17096 107 aaKnown RBP14.19□□□□□ -0.14
HDAC9-208ENST00000417496 CD9P21926 228 aa14.19□□□□□ -0.14
HDAC9-208ENST00000417496 TPD52P55327 224 aaPredicted RBP14.19□□□□□ -0.14
HDAC9-208ENST00000417496 KCNAB2Q13303 367 aa14.19□□□□□ -0.14
HDAC9-208ENST00000417496 ARHGEF7Q14155 803 aa14.19□□□□□ -0.14
HDAC9-208ENST00000417496 TCTN1Q2MV58 587 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms