RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 WDR43Q15061 677 aaKnown RBP eCLIP4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 TYSND1Q2T9J0 566 aa4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 TDRD12Q587J7 1177 aaKnown RBP4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 MPP7Q5T2T1 576 aa4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 WDR73Q6P4I2 378 aa4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 SYCE2Q6PIF2 218 aa4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 FIGLAQ6QHK4 219 aa4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 ZNF704Q6ZNC4 412 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 ABI3BPQ7Z7G0 1075 aa4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 CHERPQ8IWX8 916 aaKnown RBP4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 C4orf19Q8IY42 314 aa4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 ZNF595Q8IYB9 648 aa4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 CCDC170Q8IYT3 715 aa4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 C10orf53Q8N6V4 93 aa4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 ATAD1Q8NBU5 361 aa4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 ZNF548Q8NEK5 533 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 OR2AK2Q8NG84 335 aa4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 FAM216AQ8WUB2 273 aa4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 RND1Q92730 232 aa4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 MR1Q95460 341 aa4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 RHBDF1Q96CC6 855 aa4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 SPDL1Q96EA4 605 aa4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 PRMT6Q96LA8 375 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 CMKLR1Q99788 373 aa4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 DESI2Q9BSY9 194 aa4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 FAM129AQ9BZQ8 928 aa4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 FOXP1Q9H334 677 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 PTGFRNQ9P2B2 879 aa4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 CPSF3Q9UKF6 684 aaKnown RBP4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 LIPT1Q9Y234 373 aa4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 B3GALT5Q9Y2C3 310 aa4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 PTPRCP08575 1304 aa4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 PIK3C2GO75747 1445 aa4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 BLMP54132 1417 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 YEATS2Q9ULM3 1422 aa4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 ERVK-7P63135 1459 aa4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 ADGRB3O60242 1522 aa4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 ARHGEF17Q96PE2 2063 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P18-201ENST00000406327 HECW2Q9P2P5 1572 aa4.61□□□□□ -1.67
HMGB3P18-201ENST00000406327 SPHKAPQ2M3C7 1700 aa4.61□□□□□ -1.67
HMGB3P18-201ENST00000406327 LY6G6EA0A0G2JKS1 128 aa4.61□□□□□ -1.67
HMGB3P18-201ENST00000406327 TRIM64A6NGJ6 449 aa4.61□□□□□ -1.67
HMGB3P18-201ENST00000406327 TRIM64BA6NI03 449 aa4.61□□□□□ -1.67
HMGB3P18-201ENST00000406327 ENO4A6NNW6 628 aa4.61□□□□□ -1.67
HMGB3P18-201ENST00000406327 H0YAE9 185 aa4.61□□□□□ -1.67
HMGB3P18-201ENST00000406327 TO15178 435 aa4.61□□□□□ -1.67
HMGB3P18-201ENST00000406327 PPFIA2O75334 1257 aa4.61□□□□□ -1.67
HMGB3P18-201ENST00000406327 VIMP08670 466 aaKnown RBP4.61□□□□□ -1.67
HMGB3P18-201ENST00000406327 OR52Z1P0C646 297 aa4.61□□□□□ -1.67
HMGB3P18-201ENST00000406327 OR2T7P0C7T2 308 aa4.61□□□□□ -1.67
HMGB3P18-201ENST00000406327 IGHV4-30-4P0DP06 118 aa4.61□□□□□ -1.67
HMGB3P18-201ENST00000406327 HOXB2P14652 356 aa4.61□□□□□ -1.67
HMGB3P18-201ENST00000406327 PEX5P50542 639 aa4.61□□□□□ -1.67
HMGB3P18-201ENST00000406327 OASLQ15646 514 aaKnown RBP4.61□□□□□ -1.67
HMGB3P18-201ENST00000406327 HLFQ16534 295 aa4.61□□□□□ -1.67
HMGB3P18-201ENST00000406327 CALCRLQ16602 461 aa4.61□□□□□ -1.67
HMGB3P18-201ENST00000406327 NHSL2Q5HYW2 709 aa4.61□□□□□ -1.67
HMGB3P18-201ENST00000406327 SPOUT1Q5T280 376 aaKnown RBP4.61□□□□□ -1.67
HMGB3P18-201ENST00000406327 GCNT6Q5T4J0 391 aa4.61□□□□□ -1.67
HMGB3P18-201ENST00000406327 RNASEH2BQ5TBB1 312 aaKnown RBP4.61□□□□□ -1.67
HMGB3P18-201ENST00000406327 FAM69BQ5VUD6 431 aa4.61□□□□□ -1.67
HMGB3P18-201ENST00000406327 SHEQ5VZ18 495 aa4.61□□□□□ -1.67
HMGB3P18-201ENST00000406327 ALS2CLQ60I27 953 aa4.61□□□□□ -1.67
HMGB3P18-201ENST00000406327 IYDQ6PHW0 289 aa4.61□□□□□ -1.67
HMGB3P18-201ENST00000406327 GLCCI1Q86VQ1 547 aa4.61□□□□□ -1.67
HMGB3P18-201ENST00000406327 DZIP1Q86YF9 867 aaKnown RBP4.61□□□□□ -1.67
HMGB3P18-201ENST00000406327 SLC4A11Q8NBS3 891 aa4.61□□□□□ -1.67
HMGB3P18-201ENST00000406327 WASF1Q92558 559 aa4.61□□□□□ -1.67
HMGB3P18-201ENST00000406327 FAM81BQ96LP2 452 aa4.61□□□□□ -1.67
HMGB3P18-201ENST00000406327 CRAMP1Q96RY5 1269 aa4.61□□□□□ -1.67
HMGB3P18-201ENST00000406327 INPP5KQ9BT40 448 aa4.61□□□□□ -1.67
HMGB3P18-201ENST00000406327 FNDC11Q9BVV2 318 aa4.61□□□□□ -1.67
HMGB3P18-201ENST00000406327 ERAP1Q9NZ08 941 aa4.61□□□□□ -1.67
HMGB3P18-201ENST00000406327 DNAJB9Q9UBS3 223 aa4.61□□□□□ -1.67
HMGB3P18-201ENST00000406327 CDH7Q9ULB5 785 aa4.61□□□□□ -1.67
HMGB3P18-201ENST00000406327 SNX9Q9Y5X1 595 aa4.61□□□□□ -1.67
HMGB3P18-201ENST00000406327 ZFYVE9O95405 1425 aa4.61□□□□□ -1.67
HMGB3P18-201ENST00000406327 ASXL1Q8IXJ9 1541 aa4.61□□□□□ -1.67
HMGB3P18-201ENST00000406327 GLI2P10070 1586 aa4.61□□□□□ -1.67
HMGB3P18-201ENST00000406327 MAP3K4Q9Y6R4 1608 aa4.61□□□□□ -1.67
HMGB3P18-201ENST00000406327 PPRC1Q5VV67 1664 aaKnown RBP4.61□□□□□ -1.67
HMGB3P18-201ENST00000406327 A0A0U1RQG5 324 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 BICDL2A1A5D9 508 aa4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 SMTNL1A8MU46 457 aa4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 TRIM77I1YAP6 450 aa4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 PLK4O00444 970 aa4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 TNFRSF13BO14836 293 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 CLIC2O15247 247 aa4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 XRCC3O43542 346 aa4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 KCNJ13O60928 360 aa4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 GBAP04062 536 aa4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 SUPT20HL2P0C7V6 817 aa4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 TNFRSF1BP20333 461 aa4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 CDC25AP30304 524 aa4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 GABRA5P31644 462 aa4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 SOAT1P35610 550 aa4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 AMPHP49418 695 aa4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 PGGT1BP53609 377 aa4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 INHBEP58166 350 aa4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 TUBB4BP68371 445 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms