RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 SEMA4FO95754 770 aa18.96■□□□□ 0.63
PDLIM2-204ENST00000397760 TSPAN12O95859 305 aa18.96■□□□□ 0.63
PDLIM2-204ENST00000397760 FTH1P02794 183 aa18.96■□□□□ 0.63
PDLIM2-204ENST00000397760 DCNP07585 359 aaKnown RBP18.96■□□□□ 0.63
PDLIM2-204ENST00000397760 TEAD1P28347 426 aa18.96■□□□□ 0.63
PDLIM2-204ENST00000397760 CCR7P32248 378 aa18.96■□□□□ 0.63
PDLIM2-204ENST00000397760 CTSCP53634 463 aa18.96■□□□□ 0.63
PDLIM2-204ENST00000397760 ATP6V0D1P61421 351 aa18.96■□□□□ 0.63
PDLIM2-204ENST00000397760 CDK3Q00526 305 aa18.96■□□□□ 0.63
PDLIM2-204ENST00000397760 TECRLQ5HYJ1 363 aa18.96■□□□□ 0.63
PDLIM2-204ENST00000397760 TMEM220Q6QAJ8 160 aa18.96■□□□□ 0.63
PDLIM2-204ENST00000397760 BEND7Q8N7W2 519 aaPredicted RBP18.96■□□□□ 0.63
PDLIM2-204ENST00000397760 ZNF781Q8N8C0 355 aa18.96■□□□□ 0.63
PDLIM2-204ENST00000397760 FZD3Q9NPG1 666 aa18.96■□□□□ 0.63
PDLIM2-204ENST00000397760 KLHL42Q9P2K6 505 aa18.96■□□□□ 0.63
PDLIM2-204ENST00000397760 ATXN10Q9UBB4 475 aa18.96■□□□□ 0.63
PDLIM2-204ENST00000397760 PRPF19Q9UMS4 504 aaKnown RBP18.96■□□□□ 0.63
PDLIM2-204ENST00000397760 MATN2O00339 956 aa18.95■□□□□ 0.62
PDLIM2-204ENST00000397760 HDAC3O15379 428 aa18.95■□□□□ 0.62
PDLIM2-204ENST00000397760 THRAP10827 490 aa18.95■□□□□ 0.62
PDLIM2-204ENST00000397760 COX4I1P13073 169 aa18.95■□□□□ 0.62
PDLIM2-204ENST00000397760 NCF2P19878 526 aaPredicted RBP18.95■□□□□ 0.62
PDLIM2-204ENST00000397760 DGKAP23743 735 aa18.95■□□□□ 0.62
PDLIM2-204ENST00000397760 AOAHP28039 575 aa18.95■□□□□ 0.62
PDLIM2-204ENST00000397760 TRIM23P36406 574 aa18.95■□□□□ 0.62
PDLIM2-204ENST00000397760 RGS4P49798 205 aa18.95■□□□□ 0.62
PDLIM2-204ENST00000397760 KLF10Q13118 480 aa18.95■□□□□ 0.62
PDLIM2-204ENST00000397760 MTAPQ13126 283 aa18.95■□□□□ 0.62
PDLIM2-204ENST00000397760 PRKAA1Q13131 559 aa18.95■□□□□ 0.62
PDLIM2-204ENST00000397760 GTF2H3Q13889 308 aa18.95■□□□□ 0.62
PDLIM2-204ENST00000397760 TTLL9Q3SXZ7 439 aa18.95■□□□□ 0.62
PDLIM2-204ENST00000397760 PTERQ96BW5 349 aa18.95■□□□□ 0.62
PDLIM2-204ENST00000397760 NECAB3Q96P71 396 aaPredicted RBP18.95■□□□□ 0.62
PDLIM2-204ENST00000397760 ECSITQ9BQ95 431 aa18.95■□□□□ 0.62
PDLIM2-204ENST00000397760 GATA5Q9BWX5 397 aaPredicted RBP18.95■□□□□ 0.62
PDLIM2-204ENST00000397760 LGR4Q9BXB1 951 aa18.95■□□□□ 0.62
PDLIM2-204ENST00000397760 TEX101Q9BY14 249 aa18.95■□□□□ 0.62
PDLIM2-204ENST00000397760 TPSD1Q9BZJ3 242 aa18.95■□□□□ 0.62
PDLIM2-204ENST00000397760 EPHX3Q9H6B9 360 aa18.95■□□□□ 0.62
PDLIM2-204ENST00000397760 WDR26Q9H7D7 661 aa18.95■□□□□ 0.62
PDLIM2-204ENST00000397760 TCF7L2Q9NQB0 619 aa18.95■□□□□ 0.62
PDLIM2-204ENST00000397760 MRGBPQ9NV56 204 aa18.95■□□□□ 0.62
PDLIM2-204ENST00000397760 PDP2Q9P2J9 529 aa18.95■□□□□ 0.62
PDLIM2-204ENST00000397760 VEGFDO43915 354 aa18.95■□□□□ 0.62
PDLIM2-204ENST00000397760 ZNF217O75362 1048 aa18.95■□□□□ 0.62
PDLIM2-204ENST00000397760 APBB3O95704 486 aa18.95■□□□□ 0.62
PDLIM2-204ENST00000397760 OXTRP30559 389 aa18.95■□□□□ 0.62
PDLIM2-204ENST00000397760 PRLHRP49683 370 aa18.95■□□□□ 0.62
PDLIM2-204ENST00000397760 DHDDSQ86SQ9 333 aa18.95■□□□□ 0.62
PDLIM2-204ENST00000397760 FBXW8Q8N3Y1 598 aa18.95■□□□□ 0.62
PDLIM2-204ENST00000397760 CPSF7Q8N684 471 aaKnown RBP18.95■□□□□ 0.62
PDLIM2-204ENST00000397760 KIAA1191Q96A73 305 aa18.95■□□□□ 0.62
PDLIM2-204ENST00000397760 TOE1Q96GM8 510 aaKnown RBP18.95■□□□□ 0.62
PDLIM2-204ENST00000397760 PDLIM5Q96HC4 596 aaKnown RBP18.95■□□□□ 0.62
PDLIM2-204ENST00000397760 TFB2MQ9H5Q4 396 aaKnown RBP18.95■□□□□ 0.62
PDLIM2-204ENST00000397760 IKZF3Q9UKT9 509 aa18.95■□□□□ 0.62
PDLIM2-204ENST00000397760 TMEM98Q9Y2Y6 226 aa18.95■□□□□ 0.62
PDLIM2-204ENST00000397760 OR1A2Q9Y585 309 aa18.95■□□□□ 0.62
PDLIM2-204ENST00000397760 TRPM6Q9BX84 2022 aa18.95■□□□□ 0.62
PDLIM2-204ENST00000397760 MEI4A8MW99 385 aa18.94■□□□□ 0.62
PDLIM2-204ENST00000397760 ITGAXP20702 1163 aa18.94■□□□□ 0.62
PDLIM2-204ENST00000397760 CD6P30203 668 aa18.94■□□□□ 0.62
PDLIM2-204ENST00000397760 IGFALSP35858 605 aa18.94■□□□□ 0.62
PDLIM2-204ENST00000397760 SERPINB5P36952 375 aa18.94■□□□□ 0.62
PDLIM2-204ENST00000397760 RPL14P50914 215 aaKnown RBP18.94■□□□□ 0.62
PDLIM2-204ENST00000397760 MTTPP55157 894 aa18.94■□□□□ 0.62
PDLIM2-204ENST00000397760 DOK6Q6PKX4 331 aa18.94■□□□□ 0.62
PDLIM2-204ENST00000397760 KBTBD2Q8IY47 623 aa18.94■□□□□ 0.62
PDLIM2-204ENST00000397760 ELMO1Q92556 727 aa18.94■□□□□ 0.62
PDLIM2-204ENST00000397760 MYOCQ99972 504 aa18.94■□□□□ 0.62
PDLIM2-204ENST00000397760 CCM2Q9BSQ5 444 aa18.94■□□□□ 0.62
PDLIM2-204ENST00000397760 WSB2Q9NYS7 404 aaPredicted RBP18.94■□□□□ 0.62
PDLIM2-204ENST00000397760 TSR3Q9UJK0 312 aaKnown RBP18.94■□□□□ 0.62
PDLIM2-204ENST00000397760 NUMA1Q14980 2115 aa18.93■□□□□ 0.62
PDLIM2-204ENST00000397760 CDC7O00311 574 aa18.93■□□□□ 0.62
PDLIM2-204ENST00000397760 BTN3A1O00481 513 aa18.93■□□□□ 0.62
PDLIM2-204ENST00000397760 KPNA5O15131 536 aa18.93■□□□□ 0.62
PDLIM2-204ENST00000397760 DCXO43602 365 aa18.93■□□□□ 0.62
PDLIM2-204ENST00000397760 ZNF8P17098 575 aaPredicted RBP18.93■□□□□ 0.62
PDLIM2-204ENST00000397760 KCNC1P48547 511 aa18.93■□□□□ 0.62
PDLIM2-204ENST00000397760 PXNP49023 591 aaPredicted RBP18.93■□□□□ 0.62
PDLIM2-204ENST00000397760 HSPA14Q0VDF9 509 aa18.93■□□□□ 0.62
PDLIM2-204ENST00000397760 HERC3Q15034 1050 aa18.93■□□□□ 0.62
PDLIM2-204ENST00000397760 OR4D1Q15615 310 aa18.93■□□□□ 0.62
PDLIM2-204ENST00000397760 BCL7AQ4VC05 210 aa18.93■□□□□ 0.62
PDLIM2-204ENST00000397760 TRAPPC5Q8IUR0 188 aa18.93■□□□□ 0.62
PDLIM2-204ENST00000397760 POU5F2Q8N7G0 328 aa18.93■□□□□ 0.62
PDLIM2-204ENST00000397760 RHEBL1Q8TAI7 183 aa18.93■□□□□ 0.62
PDLIM2-204ENST00000397760 RLN3Q8WXF3 142 aa18.93■□□□□ 0.62
PDLIM2-204ENST00000397760 SERPINI1Q99574 410 aa18.93■□□□□ 0.62
PDLIM2-204ENST00000397760 C6orf106Q9H6K1 298 aaPredicted RBP18.93■□□□□ 0.62
PDLIM2-204ENST00000397760 PHPT1Q9NRX4 125 aaPredicted RBP18.93■□□□□ 0.62
PDLIM2-204ENST00000397760 NPEPPSL1A6NEC2 478 aa18.93■□□□□ 0.62
PDLIM2-204ENST00000397760 DLX3O60479 287 aa18.93■□□□□ 0.62
PDLIM2-204ENST00000397760 CBSLP0DN79 551 aa18.93■□□□□ 0.62
PDLIM2-204ENST00000397760 CBSP35520 551 aa18.93■□□□□ 0.62
PDLIM2-204ENST00000397760 TBL3Q12788 808 aaKnown RBP18.93■□□□□ 0.62
PDLIM2-204ENST00000397760 BOP1Q14137 746 aaKnown RBP18.93■□□□□ 0.62
PDLIM2-204ENST00000397760 TSNQ15631 228 aaKnown RBP18.93■□□□□ 0.62
PDLIM2-204ENST00000397760 SLC9B1Q4ZJI4 515 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms