RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 SGF29Q96ES7 293 aa14.63□□□□□ -0.07
CAPN3-207ENST00000397200 COX14Q96I36 57 aa14.63□□□□□ -0.07
CAPN3-207ENST00000397200 FAR2Q96K12 515 aa14.63□□□□□ -0.07
CAPN3-207ENST00000397200 BMFQ96LC9 184 aa14.63□□□□□ -0.07
CAPN3-207ENST00000397200 APOOQ9BUR5 198 aa14.63□□□□□ -0.07
CAPN3-207ENST00000397200 ZCCHC2Q9C0B9 1178 aaKnown RBP14.63□□□□□ -0.07
CAPN3-207ENST00000397200 MIR1-1HGQ9H1L0 117 aa14.63□□□□□ -0.07
CAPN3-207ENST00000397200 GSTO2Q9H4Y5 243 aa14.63□□□□□ -0.07
CAPN3-207ENST00000397200 TFB2MQ9H5Q4 396 aaKnown RBP14.63□□□□□ -0.07
CAPN3-207ENST00000397200 AASDHPPTQ9NRN7 309 aa14.63□□□□□ -0.07
CAPN3-207ENST00000397200 SPAG17Q6Q759 2223 aa14.63□□□□□ -0.07
CAPN3-207ENST00000397200 CCDC189A1A4V9 331 aa14.63□□□□□ -0.07
CAPN3-207ENST00000397200 H0Y8X5 98 aa14.63□□□□□ -0.07
CAPN3-207ENST00000397200 CACNB4O00305 520 aaPredicted RBP14.63□□□□□ -0.07
CAPN3-207ENST00000397200 TOR1BO14657 336 aa14.63□□□□□ -0.07
CAPN3-207ENST00000397200 OR1I1O60431 355 aa14.63□□□□□ -0.07
CAPN3-207ENST00000397200 MTX2O75431 263 aa14.63□□□□□ -0.07
CAPN3-207ENST00000397200 MYCLP1P12525 358 aaPredicted RBP14.63□□□□□ -0.07
CAPN3-207ENST00000397200 IMPDH1P20839 514 aa14.63□□□□□ -0.07
CAPN3-207ENST00000397200 MAOBP27338 520 aa14.63□□□□□ -0.07
CAPN3-207ENST00000397200 PGM1P36871 562 aa14.63□□□□□ -0.07
CAPN3-207ENST00000397200 NSG1P42857 185 aa14.63□□□□□ -0.07
CAPN3-207ENST00000397200 DHPSP49366 369 aaPredicted RBP14.63□□□□□ -0.07
CAPN3-207ENST00000397200 INHBCP55103 352 aa14.63□□□□□ -0.07
CAPN3-207ENST00000397200 BTKQ06187 659 aa14.63□□□□□ -0.07
CAPN3-207ENST00000397200 KLF10Q13118 480 aa14.63□□□□□ -0.07
CAPN3-207ENST00000397200 LSM12Q3MHD2 195 aaKnown RBP14.63□□□□□ -0.07
CAPN3-207ENST00000397200 PLK5Q496M5 336 aa14.63□□□□□ -0.07
CAPN3-207ENST00000397200 SH2D4BQ5SQS7 431 aa14.63□□□□□ -0.07
CAPN3-207ENST00000397200 LYSMD4Q5XG99 296 aa14.63□□□□□ -0.07
CAPN3-207ENST00000397200 FAM174AQ8TBP5 190 aa14.63□□□□□ -0.07
CAPN3-207ENST00000397200 FUBP1Q96AE4 644 aaKnown RBP14.63□□□□□ -0.07
CAPN3-207ENST00000397200 SLC6A18Q96N87 628 aa14.63□□□□□ -0.07
CAPN3-207ENST00000397200 ATOH8Q96SQ7 321 aa14.63□□□□□ -0.07
CAPN3-207ENST00000397200 BOCQ9BWV1 1114 aa14.63□□□□□ -0.07
CAPN3-207ENST00000397200 DERL2Q9GZP9 239 aa14.63□□□□□ -0.07
CAPN3-207ENST00000397200 CLPBQ9H078 707 aa14.63□□□□□ -0.07
CAPN3-207ENST00000397200 ALG9Q9H6U8 611 aa14.63□□□□□ -0.07
CAPN3-207ENST00000397200 ACSS2Q9NR19 701 aa14.63□□□□□ -0.07
CAPN3-207ENST00000397200 CDYLQ9Y232 598 aa14.63□□□□□ -0.07
CAPN3-207ENST00000397200 COMMD10Q9Y6G5 202 aa14.63□□□□□ -0.07
CAPN3-207ENST00000397200 IGLV3-16A0A075B6K0 115 aa14.62□□□□□ -0.07
CAPN3-207ENST00000397200 TRPC5OSA6NMA1 111 aa14.62□□□□□ -0.07
CAPN3-207ENST00000397200 PRMT5O14744 637 aaPredicted RBP14.62□□□□□ -0.07
CAPN3-207ENST00000397200 RHOBTB1O94844 696 aa14.62□□□□□ -0.07
CAPN3-207ENST00000397200 LMNAP02545 664 aaKnown RBP14.62□□□□□ -0.07
CAPN3-207ENST00000397200 JUNP05412 331 aaKnown RBP14.62□□□□□ -0.07
CAPN3-207ENST00000397200 RABIFP47224 123 aa14.62□□□□□ -0.07
CAPN3-207ENST00000397200 KCNC1P48547 511 aa14.62□□□□□ -0.07
CAPN3-207ENST00000397200 CCNG1P51959 295 aa14.62□□□□□ -0.07
CAPN3-207ENST00000397200 KIAA1024LP59773 190 aa14.62□□□□□ -0.07
CAPN3-207ENST00000397200 YPEL5P62699 121 aa14.62□□□□□ -0.07
CAPN3-207ENST00000397200 ZNF678Q5SXM1 525 aa14.62□□□□□ -0.07
CAPN3-207ENST00000397200 ZNF648Q5T619 568 aaPredicted RBP14.62□□□□□ -0.07
CAPN3-207ENST00000397200 ACAD11Q709F0 780 aa14.62□□□□□ -0.07
CAPN3-207ENST00000397200 ABI3BPQ7Z7G0 1075 aa14.62□□□□□ -0.07
CAPN3-207ENST00000397200 CCNYL1Q8N7R7 359 aa14.62□□□□□ -0.07
CAPN3-207ENST00000397200 AGR3Q8TD06 166 aa14.62□□□□□ -0.07
CAPN3-207ENST00000397200 DNASE2BQ8WZ79 361 aa14.62□□□□□ -0.07
CAPN3-207ENST00000397200 BIRC8Q96P09 236 aa14.62□□□□□ -0.07
CAPN3-207ENST00000397200 LGR4Q9BXB1 951 aa14.62□□□□□ -0.07
CAPN3-207ENST00000397200 CCDC68Q9H2F9 335 aa14.62□□□□□ -0.07
CAPN3-207ENST00000397200 EML4Q9HC35 981 aaKnown RBP14.62□□□□□ -0.07
CAPN3-207ENST00000397200 SYTL2Q9HCH5 934 aa14.62□□□□□ -0.07
CAPN3-207ENST00000397200 TRIM39Q9HCM9 518 aa14.62□□□□□ -0.07
CAPN3-207ENST00000397200 TAS2R13Q9NYV9 303 aa14.62□□□□□ -0.07
CAPN3-207ENST00000397200 ZNF318Q5VUA4 2279 aa14.62□□□□□ -0.07
CAPN3-207ENST00000397200 TNRC6BQ9UPQ9 1833 aaKnown RBP14.61□□□□□ -0.07
CAPN3-207ENST00000397200 E9PBE3 544 aa14.61□□□□□ -0.07
CAPN3-207ENST00000397200 H3BMM5 538 aa14.61□□□□□ -0.07
CAPN3-207ENST00000397200 SDHDO14521 159 aa14.61□□□□□ -0.07
CAPN3-207ENST00000397200 KLHL41O60662 606 aa14.61□□□□□ -0.07
CAPN3-207ENST00000397200 HOXC4P09017 264 aaPredicted RBP14.61□□□□□ -0.07
CAPN3-207ENST00000397200 TPBGLP0DKB5 382 aa14.61□□□□□ -0.07
CAPN3-207ENST00000397200 MTHFD2P13995 350 aa14.61□□□□□ -0.07
CAPN3-207ENST00000397200 ATP1B2P14415 290 aaPredicted RBP14.61□□□□□ -0.07
CAPN3-207ENST00000397200 RPS3P23396 243 aaKnown RBP eCLIP14.61□□□□□ -0.07
CAPN3-207ENST00000397200 FMO4P31512 558 aa14.61□□□□□ -0.07
CAPN3-207ENST00000397200 THOP1P52888 689 aa14.61□□□□□ -0.07
CAPN3-207ENST00000397200 PFN3P60673 137 aa14.61□□□□□ -0.07
CAPN3-207ENST00000397200 ATP6V0D1P61421 351 aa14.61□□□□□ -0.07
CAPN3-207ENST00000397200 RACK1P63244 317 aaKnown RBP14.61□□□□□ -0.07
CAPN3-207ENST00000397200 B4GALNT1Q00973 533 aa14.61□□□□□ -0.07
CAPN3-207ENST00000397200 TMEM115Q12893 351 aaPredicted RBP14.61□□□□□ -0.07
CAPN3-207ENST00000397200 PDAP1Q13442 181 aaKnown RBP14.61□□□□□ -0.07
CAPN3-207ENST00000397200 GTF2H3Q13889 308 aa14.61□□□□□ -0.07
CAPN3-207ENST00000397200 SIM2Q14190 667 aaPredicted RBP14.61□□□□□ -0.07
CAPN3-207ENST00000397200 HERC3Q15034 1050 aa14.61□□□□□ -0.07
CAPN3-207ENST00000397200 OR4D1Q15615 310 aa14.61□□□□□ -0.07
CAPN3-207ENST00000397200 KHDC1Q4VXA5 237 aaKnown RBP14.61□□□□□ -0.07
CAPN3-207ENST00000397200 ICE2Q659A1 982 aa14.61□□□□□ -0.07
CAPN3-207ENST00000397200 DOK6Q6PKX4 331 aa14.61□□□□□ -0.07
CAPN3-207ENST00000397200 Q6ZSR6 202 aa14.61□□□□□ -0.07
CAPN3-207ENST00000397200 NET1Q7Z628 596 aaPredicted RBP14.61□□□□□ -0.07
CAPN3-207ENST00000397200 KIAA1191Q96A73 305 aa14.61□□□□□ -0.07
CAPN3-207ENST00000397200 CCDC97Q96F63 343 aaPredicted RBP14.61□□□□□ -0.07
CAPN3-207ENST00000397200 ZC3H10Q96K80 434 aaKnown RBP14.61□□□□□ -0.07
CAPN3-207ENST00000397200 LRFN3Q9BTN0 628 aa14.61□□□□□ -0.07
CAPN3-207ENST00000397200 NUF2Q9BZD4 464 aa14.61□□□□□ -0.07
CAPN3-207ENST00000397200 OR2AG1Q9H205 316 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms