RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 GALNT18Q6P9A2 607 aa18.03■□□□□ 0.48
PCDHA1-202ENST00000394633 NECAB2Q7Z6G3 386 aa18.03■□□□□ 0.48
PCDHA1-202ENST00000394633 EFHBQ8N7U6 833 aa18.03■□□□□ 0.48
PCDHA1-202ENST00000394633 OR2T12Q8NG77 320 aa18.03■□□□□ 0.48
PCDHA1-202ENST00000394633 TRUB1Q8WWH5 349 aaKnown RBP18.03■□□□□ 0.48
PCDHA1-202ENST00000394633 UGT2B28Q9BY64 529 aa18.03■□□□□ 0.48
PCDHA1-202ENST00000394633 PALMDQ9NP74 551 aa18.03■□□□□ 0.48
PCDHA1-202ENST00000394633 TMEM39AQ9NV64 488 aa18.03■□□□□ 0.48
PCDHA1-202ENST00000394633 DNAJB9Q9UBS3 223 aa18.03■□□□□ 0.48
PCDHA1-202ENST00000394633 ARIH1Q9Y4X5 557 aaPredicted RBP18.03■□□□□ 0.48
PCDHA1-202ENST00000394633 PCDHGC4Q9Y5F7 938 aa18.03■□□□□ 0.48
PCDHA1-202ENST00000394633 K7EPI3 171 aa18.02■□□□□ 0.48
PCDHA1-202ENST00000394633 GPR39O43194 453 aa18.02■□□□□ 0.48
PCDHA1-202ENST00000394633 FUCA1P04066 466 aa18.02■□□□□ 0.48
PCDHA1-202ENST00000394633 CCR3P51677 355 aa18.02■□□□□ 0.48
PCDHA1-202ENST00000394633 CLCN7P51798 805 aa18.02■□□□□ 0.48
PCDHA1-202ENST00000394633 PPP2R2BQ00005 443 aa18.02■□□□□ 0.48
PCDHA1-202ENST00000394633 LAPTM5Q13571 262 aa18.02■□□□□ 0.48
PCDHA1-202ENST00000394633 GTF2H2Q13888 395 aa18.02■□□□□ 0.48
PCDHA1-202ENST00000394633 MEP1AQ16819 746 aa18.02■□□□□ 0.48
PCDHA1-202ENST00000394633 CTXN3Q4LDR2 81 aa18.02■□□□□ 0.48
PCDHA1-202ENST00000394633 GTF2H2CQ6P1K8 395 aa18.02■□□□□ 0.48
PCDHA1-202ENST00000394633 AADATQ8N5Z0 425 aa18.02■□□□□ 0.48
PCDHA1-202ENST00000394633 ZNF548Q8NEK5 533 aaPredicted RBP18.02■□□□□ 0.48
PCDHA1-202ENST00000394633 PJA1Q8NG27 643 aa18.02■□□□□ 0.48
PCDHA1-202ENST00000394633 CHPT1Q8WUD6 406 aa18.02■□□□□ 0.48
PCDHA1-202ENST00000394633 FEM1AQ9BSK4 669 aa18.02■□□□□ 0.48
PCDHA1-202ENST00000394633 CRISPLD1Q9H336 500 aa18.02■□□□□ 0.48
PCDHA1-202ENST00000394633 IKZF5Q9H5V7 419 aa18.02■□□□□ 0.48
PCDHA1-202ENST00000394633 C11orf49Q9H6J7 331 aa18.02■□□□□ 0.48
PCDHA1-202ENST00000394633 LIMD1Q9UGP4 676 aa18.02■□□□□ 0.48
PCDHA1-202ENST00000394633 CCL27Q9Y4X3 112 aa18.02■□□□□ 0.48
PCDHA1-202ENST00000394633 ZFP37Q9Y6Q3 630 aaPredicted RBP18.02■□□□□ 0.48
PCDHA1-202ENST00000394633 FUOMA2VDF0 154 aa18.02■□□□□ 0.47
PCDHA1-202ENST00000394633 H3BNC9 293 aa18.02■□□□□ 0.47
PCDHA1-202ENST00000394633 TMEM189-UBE2V1I3L0A0 370 aa18.02■□□□□ 0.47
PCDHA1-202ENST00000394633 GSTA4O15217 222 aa18.02■□□□□ 0.47
PCDHA1-202ENST00000394633 KDELR3O43731 214 aa18.02■□□□□ 0.47
PCDHA1-202ENST00000394633 ATP6V1G1O75348 118 aa18.02■□□□□ 0.47
PCDHA1-202ENST00000394633 GMNNO75496 209 aa18.02■□□□□ 0.47
PCDHA1-202ENST00000394633 CLPXO76031 633 aa18.02■□□□□ 0.47
PCDHA1-202ENST00000394633 CST1P01037 141 aa18.02■□□□□ 0.47
PCDHA1-202ENST00000394633 OXCT1P55809 520 aa18.02■□□□□ 0.47
PCDHA1-202ENST00000394633 ARPP19P56211 112 aa18.02■□□□□ 0.47
PCDHA1-202ENST00000394633 ATP1A4Q13733 1029 aa18.02■□□□□ 0.47
PCDHA1-202ENST00000394633 NR1D2Q14995 579 aa18.02■□□□□ 0.47
PCDHA1-202ENST00000394633 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.02■□□□□ 0.47
PCDHA1-202ENST00000394633 OR10A6Q8NH74 314 aa18.02■□□□□ 0.47
PCDHA1-202ENST00000394633 FKBP10Q96AY3 582 aa18.02■□□□□ 0.47
PCDHA1-202ENST00000394633 SDCCAG3Q96C92 435 aa18.02■□□□□ 0.47
PCDHA1-202ENST00000394633 ADGRE2Q9UHX3 823 aa18.02■□□□□ 0.47
PCDHA1-202ENST00000394633 PCDHB7Q9Y5E2 793 aa18.02■□□□□ 0.47
PCDHA1-202ENST00000394633 RAI2Q9Y5P3 530 aa18.02■□□□□ 0.47
PCDHA1-202ENST00000394633 PFDN6O15212 129 aa18.01■□□□□ 0.47
PCDHA1-202ENST00000394633 TLR5O60602 858 aa18.01■□□□□ 0.47
PCDHA1-202ENST00000394633 SULT1C4O75897 302 aa18.01■□□□□ 0.47
PCDHA1-202ENST00000394633 F11P03951 625 aa18.01■□□□□ 0.47
PCDHA1-202ENST00000394633 CLTBP09497 229 aa18.01■□□□□ 0.47
PCDHA1-202ENST00000394633 PIGFQ07326 219 aa18.01■□□□□ 0.47
PCDHA1-202ENST00000394633 TRAF3Q13114 568 aa18.01■□□□□ 0.47
PCDHA1-202ENST00000394633 CBX3Q13185 183 aa18.01■□□□□ 0.47
PCDHA1-202ENST00000394633 SLC44A4Q53GD3 710 aa18.01■□□□□ 0.47
PCDHA1-202ENST00000394633 LAIR2Q6ISS4 152 aa18.01■□□□□ 0.47
PCDHA1-202ENST00000394633 SBSNQ6UWP8 590 aa18.01■□□□□ 0.47
PCDHA1-202ENST00000394633 FRA10AC1Q70Z53 315 aa18.01■□□□□ 0.47
PCDHA1-202ENST00000394633 RBM23Q86U06 439 aaKnown RBP18.01■□□□□ 0.47
PCDHA1-202ENST00000394633 ZBTB8BQ8NAP8 495 aaPredicted RBP18.01■□□□□ 0.47
PCDHA1-202ENST00000394633 SLC13A3Q8WWT9 602 aa18.01■□□□□ 0.47
PCDHA1-202ENST00000394633 GTF2H4Q92759 462 aa18.01■□□□□ 0.47
PCDHA1-202ENST00000394633 SLC47A1Q96FL8 570 aa18.01■□□□□ 0.47
PCDHA1-202ENST00000394633 MAGED4Q96JG8 741 aa18.01■□□□□ 0.47
PCDHA1-202ENST00000394633 CASD1Q96PB1 797 aa18.01■□□□□ 0.47
PCDHA1-202ENST00000394633 USE1Q9NZ43 259 aa18.01■□□□□ 0.47
PCDHA1-202ENST00000394633 AGO1Q9UL18 857 aaKnown RBP18.01■□□□□ 0.47
PCDHA1-202ENST00000394633 DOLKQ9UPQ8 538 aa18.01■□□□□ 0.47
PCDHA1-202ENST00000394633 PDE10AQ9Y233 779 aa18.01■□□□□ 0.47
PCDHA1-202ENST00000394633 SOBPA7XYQ1 873 aa18■□□□□ 0.47
PCDHA1-202ENST00000394633 STX7O15400 261 aaKnown RBP18■□□□□ 0.47
PCDHA1-202ENST00000394633 TBC1D4O60343 1298 aa18■□□□□ 0.47
PCDHA1-202ENST00000394633 PORP16435 677 aaPredicted RBP18■□□□□ 0.47
PCDHA1-202ENST00000394633 TPD52P55327 224 aaPredicted RBP18■□□□□ 0.47
PCDHA1-202ENST00000394633 RPS24P62847 133 aaKnown RBP18■□□□□ 0.47
PCDHA1-202ENST00000394633 RPL38P63173 70 aaKnown RBP18■□□□□ 0.47
PCDHA1-202ENST00000394633 PHEXP78562 749 aa18■□□□□ 0.47
PCDHA1-202ENST00000394633 RELAQ04206 551 aa18■□□□□ 0.47
PCDHA1-202ENST00000394633 CYP4F3Q08477 520 aa18■□□□□ 0.47
PCDHA1-202ENST00000394633 CD47Q08722 323 aa18■□□□□ 0.47
PCDHA1-202ENST00000394633 KCNAB2Q13303 367 aa18■□□□□ 0.47
PCDHA1-202ENST00000394633 AQP6Q13520 282 aa18■□□□□ 0.47
PCDHA1-202ENST00000394633 PTGR1Q14914 329 aa18■□□□□ 0.47
PCDHA1-202ENST00000394633 DPY19L1Q2PZI1 675 aa18■□□□□ 0.47
PCDHA1-202ENST00000394633 TAS2R42Q7RTR8 314 aa18■□□□□ 0.47
PCDHA1-202ENST00000394633 TMCO2Q7Z6W1 182 aaPredicted RBP18■□□□□ 0.47
PCDHA1-202ENST00000394633 MSRB3Q8IXL7 192 aa18■□□□□ 0.47
PCDHA1-202ENST00000394633 TTC30BQ8N4P2 665 aa18■□□□□ 0.47
PCDHA1-202ENST00000394633 ZNF555Q8NEP9 628 aa18■□□□□ 0.47
PCDHA1-202ENST00000394633 P2RY12Q9H244 342 aa18■□□□□ 0.47
PCDHA1-202ENST00000394633 ZMYM5Q9UJ78 669 aa18■□□□□ 0.47
PCDHA1-202ENST00000394633 CHD7Q9P2D1 2997 aa18■□□□□ 0.47
PCDHA1-202ENST00000394633 C1orf232A0A0U1RR37 186 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms