RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 SORCS3Q9UPU3 1222 aa18.68■□□□□ 0.58
CCDC50-202ENST00000392456 EIF3LQ9Y262 564 aaKnown RBP18.68■□□□□ 0.58
CCDC50-202ENST00000392456 AP3M1Q9Y2T2 418 aa18.68■□□□□ 0.58
CCDC50-202ENST00000392456 UGT2A1Q9Y4X1 527 aa18.68■□□□□ 0.58
CCDC50-202ENST00000392456 ANKRD36A6QL64 1941 aa18.68■□□□□ 0.58
CCDC50-202ENST00000392456 HEATR9A2RTY3 570 aa18.67■□□□□ 0.58
CCDC50-202ENST00000392456 OR51F1A6NGY5 319 aa18.67■□□□□ 0.58
CCDC50-202ENST00000392456 KLF11O14901 512 aa18.67■□□□□ 0.58
CCDC50-202ENST00000392456 CYP17A1P05093 508 aa18.67■□□□□ 0.58
CCDC50-202ENST00000392456 ARSAP15289 507 aa18.67■□□□□ 0.58
CCDC50-202ENST00000392456 TCF3P15923 654 aa18.67■□□□□ 0.58
CCDC50-202ENST00000392456 HLA-DPA1P20036 260 aa18.67■□□□□ 0.58
CCDC50-202ENST00000392456 CCNA2P20248 432 aa18.67■□□□□ 0.58
CCDC50-202ENST00000392456 EPHA3P29320 983 aa18.67■□□□□ 0.58
CCDC50-202ENST00000392456 COPAP53621 1224 aa18.67■□□□□ 0.58
CCDC50-202ENST00000392456 FRG1Q14331 258 aaKnown RBP18.67■□□□□ 0.58
CCDC50-202ENST00000392456 ZFP1Q6P2D0 407 aa18.67■□□□□ 0.58
CCDC50-202ENST00000392456 ANKRD53Q8N9V6 530 aa18.67■□□□□ 0.58
CCDC50-202ENST00000392456 SIMC1Q8NDZ2 872 aa18.67■□□□□ 0.58
CCDC50-202ENST00000392456 SNX18Q96RF0 628 aa18.67■□□□□ 0.58
CCDC50-202ENST00000392456 PKP2Q99959 881 aa18.67■□□□□ 0.58
CCDC50-202ENST00000392456 SLC13A1Q9BZW2 595 aa18.67■□□□□ 0.58
CCDC50-202ENST00000392456 PCP4L1A6NKN8 68 aa18.67■□□□□ 0.58
CCDC50-202ENST00000392456 SLC9A3R1O14745 358 aaPredicted RBP18.67■□□□□ 0.58
CCDC50-202ENST00000392456 HDAC3O15379 428 aa18.67■□□□□ 0.58
CCDC50-202ENST00000392456 PIGNO95427 931 aa18.67■□□□□ 0.58
CCDC50-202ENST00000392456 SRCP12931 536 aa18.67■□□□□ 0.58
CCDC50-202ENST00000392456 RRM2P31350 389 aa18.67■□□□□ 0.58
CCDC50-202ENST00000392456 SLC9A3P48764 834 aa18.67■□□□□ 0.58
CCDC50-202ENST00000392456 MPP1Q00013 466 aa18.67■□□□□ 0.58
CCDC50-202ENST00000392456 GRSF1Q12849 480 aaKnown RBP eCLIP18.67■□□□□ 0.58
CCDC50-202ENST00000392456 GEN1Q17RS7 908 aa18.67■□□□□ 0.58
CCDC50-202ENST00000392456 EML3Q32P44 896 aa18.67■□□□□ 0.58
CCDC50-202ENST00000392456 FAM109AQ8N4B1 249 aa18.67■□□□□ 0.58
CCDC50-202ENST00000392456 MDGA1Q8NFP4 955 aa18.67■□□□□ 0.58
CCDC50-202ENST00000392456 OR13C4Q8NGS5 318 aa18.67■□□□□ 0.58
CCDC50-202ENST00000392456 OMA1Q96E52 524 aa18.67■□□□□ 0.58
CCDC50-202ENST00000392456 APOPT1Q96IL0 206 aa18.67■□□□□ 0.58
CCDC50-202ENST00000392456 CDCA3Q99618 268 aaPredicted RBP18.67■□□□□ 0.58
CCDC50-202ENST00000392456 MCMBPQ9BTE3 642 aa18.67■□□□□ 0.58
CCDC50-202ENST00000392456 MRM3Q9HC36 420 aaKnown RBP18.67■□□□□ 0.58
CCDC50-202ENST00000392456 PCDHGB3Q9Y5G1 929 aa18.67■□□□□ 0.58
CCDC50-202ENST00000392456 BNIP3LO60238 219 aa18.66■□□□□ 0.58
CCDC50-202ENST00000392456 AHSGP02765 367 aa18.66■□□□□ 0.58
CCDC50-202ENST00000392456 FGF1P05230 155 aa18.66■□□□□ 0.58
CCDC50-202ENST00000392456 ITGAXP20702 1163 aa18.66■□□□□ 0.58
CCDC50-202ENST00000392456 GP5P40197 560 aa18.66■□□□□ 0.58
CCDC50-202ENST00000392456 MLLT3P42568 568 aaPredicted RBP18.66■□□□□ 0.58
CCDC50-202ENST00000392456 SLC18A2Q05940 514 aa18.66■□□□□ 0.58
CCDC50-202ENST00000392456 CDC20Q12834 499 aa18.66■□□□□ 0.58
CCDC50-202ENST00000392456 DLG2Q15700 870 aa18.66■□□□□ 0.58
CCDC50-202ENST00000392456 PPM1JQ5JR12 505 aa18.66■□□□□ 0.58
CCDC50-202ENST00000392456 PDPK2PQ6A1A2 396 aa18.66■□□□□ 0.58
CCDC50-202ENST00000392456 TANGO2Q6ICL3 276 aa18.66■□□□□ 0.58
CCDC50-202ENST00000392456 DEFB107AQ8IZN7 70 aa18.66■□□□□ 0.58
CCDC50-202ENST00000392456 TTLQ8NG68 377 aa18.66■□□□□ 0.58
CCDC50-202ENST00000392456 SMARCD2Q92925 531 aa18.66■□□□□ 0.58
CCDC50-202ENST00000392456 TMEM79Q9BSE2 394 aa18.66■□□□□ 0.58
CCDC50-202ENST00000392456 IER2Q9BTL4 223 aa18.66■□□□□ 0.58
CCDC50-202ENST00000392456 NSUN3Q9H649 340 aaKnown RBP18.66■□□□□ 0.58
CCDC50-202ENST00000392456 CAB39LQ9H9S4 337 aa18.66■□□□□ 0.58
CCDC50-202ENST00000392456 TESMINQ9Y4I5 508 aa18.66■□□□□ 0.58
CCDC50-202ENST00000392456 PCDHB9Q9Y5E1 797 aa18.66■□□□□ 0.58
CCDC50-202ENST00000392456 DOCK8Q8NF50 2099 aa18.66■□□□□ 0.58
CCDC50-202ENST00000392456 EVPLLA8MZ36 301 aa18.66■□□□□ 0.58
CCDC50-202ENST00000392456 SERPINB1P30740 379 aa18.66■□□□□ 0.58
CCDC50-202ENST00000392456 POU6F2P78424 691 aaPredicted RBP18.66■□□□□ 0.58
CCDC50-202ENST00000392456 CARTPTQ16568 116 aa18.66■□□□□ 0.58
CCDC50-202ENST00000392456 ZNF789Q5FWF6 425 aa18.66■□□□□ 0.58
CCDC50-202ENST00000392456 FSTL4Q6MZW2 842 aa18.66■□□□□ 0.58
CCDC50-202ENST00000392456 ANKRD54Q6NXT1 300 aa18.66■□□□□ 0.58
CCDC50-202ENST00000392456 CYP20A1Q6UW02 462 aa18.66■□□□□ 0.58
CCDC50-202ENST00000392456 CMC1Q7Z7K0 106 aa18.66■□□□□ 0.58
CCDC50-202ENST00000392456 LDB1Q86U70 411 aaPredicted RBP18.66■□□□□ 0.58
CCDC50-202ENST00000392456 HDAC10Q969S8 669 aa18.66■□□□□ 0.58
CCDC50-202ENST00000392456 CPNE1Q99829 537 aa18.66■□□□□ 0.58
CCDC50-202ENST00000392456 WDR12Q9GZL7 423 aaKnown RBP18.66■□□□□ 0.58
CCDC50-202ENST00000392456 CLEC1BQ9P126 229 aa18.66■□□□□ 0.58
CCDC50-202ENST00000392456 TRIM64A6NGJ6 449 aa18.65■□□□□ 0.58
CCDC50-202ENST00000392456 HEPACAM2A8MVW5 462 aa18.65■□□□□ 0.58
CCDC50-202ENST00000392456 TPP1O14773 563 aa18.65■□□□□ 0.58
CCDC50-202ENST00000392456 SLC4A1P02730 911 aa18.65■□□□□ 0.58
CCDC50-202ENST00000392456 FCARP24071 287 aa18.65■□□□□ 0.58
CCDC50-202ENST00000392456 AP2S1P53680 142 aaPredicted RBP18.65■□□□□ 0.58
CCDC50-202ENST00000392456 LGSNQ5TDP6 509 aa18.65■□□□□ 0.58
CCDC50-202ENST00000392456 CROCCQ5TZA2 2017 aa18.65■□□□□ 0.58
CCDC50-202ENST00000392456 TMEM184AQ6ZMB5 413 aa18.65■□□□□ 0.58
CCDC50-202ENST00000392456 EFHBQ8N7U6 833 aa18.65■□□□□ 0.58
CCDC50-202ENST00000392456 OR10Z1Q8NGY1 313 aa18.65■□□□□ 0.58
CCDC50-202ENST00000392456 TBATAQ96M53 351 aa18.65■□□□□ 0.58
CCDC50-202ENST00000392456 RBBP8Q99708 897 aa18.65■□□□□ 0.58
CCDC50-202ENST00000392456 HMG20AQ9NP66 347 aa18.65■□□□□ 0.58
CCDC50-202ENST00000392456 FARSBQ9NSD9 589 aaKnown RBP18.65■□□□□ 0.58
CCDC50-202ENST00000392456 ZMYM5Q9UJ78 669 aa18.65■□□□□ 0.58
CCDC50-202ENST00000392456 PRSS51A0A1B0GVH4 220 aa18.65■□□□□ 0.58
CCDC50-202ENST00000392456 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.65■□□□□ 0.58
CCDC50-202ENST00000392456 ANKRD66B4E2M5 251 aa18.65■□□□□ 0.58
CCDC50-202ENST00000392456 ATP6V1G2-DDX39BF2Z307 99 aa18.65■□□□□ 0.58
CCDC50-202ENST00000392456 MAP4P27816 1152 aaKnown RBP18.65■□□□□ 0.58
CCDC50-202ENST00000392456 BMP8BP34820 402 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms