RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 VRK3Q8IV63 474 aa17.63■□□□□ 0.41
HLA-DQB1-201ENST00000374943 GLMNQ92990 594 aa17.63■□□□□ 0.41
HLA-DQB1-201ENST00000374943 ROPN1LQ96C74 230 aa17.63■□□□□ 0.41
HLA-DQB1-201ENST00000374943 CCDC124Q96CT7 223 aaKnown RBP17.63■□□□□ 0.41
HLA-DQB1-201ENST00000374943 MYADMQ96S97 322 aa17.63■□□□□ 0.41
HLA-DQB1-201ENST00000374943 WRAP53Q9BUR4 548 aaKnown RBP17.63■□□□□ 0.41
HLA-DQB1-201ENST00000374943 PLA2G2FQ9BZM2 168 aa17.63■□□□□ 0.41
HLA-DQB1-201ENST00000374943 MRPL40Q9NQ50 206 aaKnown RBP17.63■□□□□ 0.41
HLA-DQB1-201ENST00000374943 ARL15Q9NXU5 204 aa17.63■□□□□ 0.41
HLA-DQB1-201ENST00000374943 PCDHGA7Q9Y5G6 932 aa17.63■□□□□ 0.41
HLA-DQB1-201ENST00000374943 TICRRQ7Z2Z1 1910 aa17.63■□□□□ 0.41
HLA-DQB1-201ENST00000374943 C1QTNF3-AMACRE9PGA6 284 aa17.62■□□□□ 0.41
HLA-DQB1-201ENST00000374943 RFXAPO00287 272 aa17.62■□□□□ 0.41
HLA-DQB1-201ENST00000374943 KATNA1O75449 491 aa17.62■□□□□ 0.41
HLA-DQB1-201ENST00000374943 KAT7O95251 611 aa17.62■□□□□ 0.41
HLA-DQB1-201ENST00000374943 SOD1P00441 154 aa17.62■□□□□ 0.41
HLA-DQB1-201ENST00000374943 EPB42P16452 691 aa17.62■□□□□ 0.41
HLA-DQB1-201ENST00000374943 CYP2A7P20853 494 aa17.62■□□□□ 0.41
HLA-DQB1-201ENST00000374943 IL12RB1P42701 662 aa17.62■□□□□ 0.41
HLA-DQB1-201ENST00000374943 SLC6A12P48065 614 aa17.62■□□□□ 0.41
HLA-DQB1-201ENST00000374943 DPTQ07507 201 aa17.62■□□□□ 0.41
HLA-DQB1-201ENST00000374943 CEACAM7Q14002 265 aa17.62■□□□□ 0.41
HLA-DQB1-201ENST00000374943 C6orf136Q5SQH8 315 aa17.62■□□□□ 0.41
HLA-DQB1-201ENST00000374943 ICE2Q659A1 982 aa17.62■□□□□ 0.41
HLA-DQB1-201ENST00000374943 MBOAT1Q6ZNC8 495 aa17.62■□□□□ 0.41
HLA-DQB1-201ENST00000374943 Q6ZSR9 355 aa17.62■□□□□ 0.41
HLA-DQB1-201ENST00000374943 NLRP8Q86W28 1048 aa17.62■□□□□ 0.41
HLA-DQB1-201ENST00000374943 DCBLD1Q8N8Z6 715 aa17.62■□□□□ 0.41
HLA-DQB1-201ENST00000374943 RASGEF1AQ8N9B8 481 aa17.62■□□□□ 0.41
HLA-DQB1-201ENST00000374943 ST13P5Q8NFI4 369 aaPredicted RBP17.62■□□□□ 0.41
HLA-DQB1-201ENST00000374943 NUS1Q96E22 293 aa17.62■□□□□ 0.41
HLA-DQB1-201ENST00000374943 CHFRQ96EP1 664 aa17.62■□□□□ 0.41
HLA-DQB1-201ENST00000374943 LRCH3Q96II8 777 aa17.62■□□□□ 0.41
HLA-DQB1-201ENST00000374943 HDAC8Q9BY41 377 aa17.62■□□□□ 0.41
HLA-DQB1-201ENST00000374943 SLC29A3Q9BZD2 475 aa17.62■□□□□ 0.41
HLA-DQB1-201ENST00000374943 SLC32A1Q9H598 525 aa17.62■□□□□ 0.41
HLA-DQB1-201ENST00000374943 S100A14Q9HCY8 104 aa17.62■□□□□ 0.41
HLA-DQB1-201ENST00000374943 HEBP1Q9NRV9 189 aa17.62■□□□□ 0.41
HLA-DQB1-201ENST00000374943 HCN2Q9UL51 889 aa17.62■□□□□ 0.41
HLA-DQB1-201ENST00000374943 NDUFAF1Q9Y375 327 aa17.62■□□□□ 0.41
HLA-DQB1-201ENST00000374943 LAMA3Q16787 3333 aa17.62■□□□□ 0.41
HLA-DQB1-201ENST00000374943 ATG13O75143 517 aa17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 GSTM1P09488 218 aa17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 HIST1H2AGP0C0S8 130 aaPredicted RBP17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 ANPEPP15144 967 aa17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 HIST1H2ADP20671 130 aa17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 ME2P23368 584 aa17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 HMOX2P30519 316 aa17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 VHLP40337 213 aa17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 GRIA2P42262 883 aa17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 GDF5P43026 501 aa17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 HTR6P50406 440 aa17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 GSTM4Q03013 218 aa17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 GRM2Q14416 872 aa17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 RPS6KA2Q15349 733 aa17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 SMU1Q2TAY7 513 aa17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 ATP6AP1LQ52LC2 224 aa17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 ATAT1Q5SQI0 421 aa17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 IL27RAQ6UWB1 636 aa17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 ERN2Q76MJ5 926 aaKnown RBP17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 EFCAB3Q8N7B9 438 aa17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 PCYOX1LQ8NBM8 494 aa17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 RAB7BQ96AH8 199 aa17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 HIST1H2AHQ96KK5 128 aa17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 HIST1H2AJQ99878 128 aa17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 H2AFJQ9BTM1 129 aa17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 PRSS16Q9NQE7 514 aa17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 DYRK4Q9NR20 520 aa17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 ZIM2Q9NZV7 527 aa17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 CNOT6Q9ULM6 557 aaKnown RBP17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 CDH23Q9H251 3354 aa17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 OR2AG2A6NM03 316 aa17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 TRIM38O00635 465 aa17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 CFLARO15519 480 aa17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 C6P13671 934 aa17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 ARL1P40616 181 aaPredicted RBP17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 MAPK9P45984 424 aa17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 DIO3P55073 304 aa17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 TMEM115Q12893 351 aaPredicted RBP17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 ENPP2Q13822 863 aa17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 BCL7AQ4VC05 210 aa17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 ZNF648Q5T619 568 aaPredicted RBP17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 BLOC1S3Q6QNY0 202 aa17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 LRRC74BQ6ZQY2 392 aa17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 SFRP1Q8N474 314 aa17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 SNX31Q8N9S9 440 aa17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 KCNV2Q8TDN2 545 aa17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 GDF15Q99988 308 aa17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 CCM2Q9BSQ5 444 aa17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 ZCCHC2Q9C0B9 1178 aaKnown RBP17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 SLC52A3Q9NQ40 469 aa17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 BCAP29Q9UHQ4 241 aa17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 CCL27Q9Y4X3 112 aa17.61■□□□□ 0.41
HLA-DQB1-201ENST00000374943 SLC5A10A0PJK1 596 aa17.6■□□□□ 0.41
HLA-DQB1-201ENST00000374943 PABPN1LA6NDY0 278 aaKnown RBP17.6■□□□□ 0.41
HLA-DQB1-201ENST00000374943 NR5A2O00482 541 aa17.6■□□□□ 0.41
HLA-DQB1-201ENST00000374943 LSM1O15116 133 aaKnown RBP17.6■□□□□ 0.41
HLA-DQB1-201ENST00000374943 TSPAN6O43657 245 aa17.6■□□□□ 0.41
HLA-DQB1-201ENST00000374943 RECQL5O94762 991 aaPredicted RBP17.6■□□□□ 0.41
HLA-DQB1-201ENST00000374943 LAMP2P13473 410 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms