RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 PDE7BQ9NP56 450 aa14.79□□□□□ -0.04
RPF1-202ENST00000370656 RAB6BQ9NRW1 208 aa14.79□□□□□ -0.04
RPF1-202ENST00000370656 KLC4Q9NSK0 619 aa14.79□□□□□ -0.04
RPF1-202ENST00000370656 CNOT6Q9ULM6 557 aaKnown RBP14.79□□□□□ -0.04
RPF1-202ENST00000370656 RPL26L1Q9UNX3 145 aaKnown RBP14.79□□□□□ -0.04
RPF1-202ENST00000370656 CHKBQ9Y259 395 aa14.79□□□□□ -0.04
RPF1-202ENST00000370656 TCRBV7S3A2A0A539 114 aa14.78□□□□□ -0.04
RPF1-202ENST00000370656 AGPSO00116 658 aa14.78□□□□□ -0.04
RPF1-202ENST00000370656 SPAG6O75602 509 aa14.78□□□□□ -0.04
RPF1-202ENST00000370656 TMEM63AO94886 807 aa14.78□□□□□ -0.04
RPF1-202ENST00000370656 DDAH2O95865 285 aa14.78□□□□□ -0.04
RPF1-202ENST00000370656 NUDT17P0C025 328 aa14.78□□□□□ -0.04
RPF1-202ENST00000370656 MAGEA3P43357 314 aa14.78□□□□□ -0.04
RPF1-202ENST00000370656 SPINT3P49223 89 aa14.78□□□□□ -0.04
RPF1-202ENST00000370656 HENMT1Q5T8I9 393 aaKnown RBP14.78□□□□□ -0.04
RPF1-202ENST00000370656 CACHD1Q5VU97 1274 aa14.78□□□□□ -0.04
RPF1-202ENST00000370656 PPP1R21Q6ZMI0 780 aa14.78□□□□□ -0.04
RPF1-202ENST00000370656 PRSS42Q7Z5A4 293 aa14.78□□□□□ -0.04
RPF1-202ENST00000370656 TMEM135Q86UB9 458 aa14.78□□□□□ -0.04
RPF1-202ENST00000370656 RNF31Q96EP0 1072 aa14.78□□□□□ -0.04
RPF1-202ENST00000370656 LYSMD1Q96S90 227 aa14.78□□□□□ -0.04
RPF1-202ENST00000370656 SH3GL2Q99962 352 aa14.78□□□□□ -0.04
RPF1-202ENST00000370656 SLC25A23Q9BV35 468 aa14.78□□□□□ -0.04
RPF1-202ENST00000370656 TMEM109Q9BVC6 243 aa14.78□□□□□ -0.04
RPF1-202ENST00000370656 TDRD1Q9BXT4 1180 aaKnown RBP14.78□□□□□ -0.04
RPF1-202ENST00000370656 GPR87Q9BY21 358 aa14.78□□□□□ -0.04
RPF1-202ENST00000370656 ACTL8Q9H568 366 aa14.78□□□□□ -0.04
RPF1-202ENST00000370656 LHX9Q9NQ69 397 aa14.78□□□□□ -0.04
RPF1-202ENST00000370656 OGFRQ9NZT2 677 aa14.78□□□□□ -0.04
RPF1-202ENST00000370656 TTLL3Q9Y4R7 772 aa14.78□□□□□ -0.04
RPF1-202ENST00000370656 SHANK1Q9Y566 2161 aa14.78□□□□□ -0.04
RPF1-202ENST00000370656 HIVEP3Q5T1R4 2406 aa14.77□□□□□ -0.04
RPF1-202ENST00000370656 ERI2A8K979 691 aaKnown RBP14.77□□□□□ -0.05
RPF1-202ENST00000370656 FADS2P1A8MWK0 482 aa14.77□□□□□ -0.05
RPF1-202ENST00000370656 DNAJB5O75953 348 aa14.77□□□□□ -0.05
RPF1-202ENST00000370656 SUN1O94901 812 aa14.77□□□□□ -0.05
RPF1-202ENST00000370656 TTC4O95801 387 aa14.77□□□□□ -0.05
RPF1-202ENST00000370656 PDGFAP04085 211 aa14.77□□□□□ -0.05
RPF1-202ENST00000370656 MLNP12872 115 aa14.77□□□□□ -0.05
RPF1-202ENST00000370656 CD68P34810 354 aaPredicted RBP14.77□□□□□ -0.05
RPF1-202ENST00000370656 CAPZBP47756 277 aa14.77□□□□□ -0.05
RPF1-202ENST00000370656 RPS15P62841 145 aaKnown RBP14.77□□□□□ -0.05
RPF1-202ENST00000370656 INSCQ1MX18 579 aa14.77□□□□□ -0.05
RPF1-202ENST00000370656 KCTD11Q693B1 232 aa14.77□□□□□ -0.05
RPF1-202ENST00000370656 ALG1LQ6GMV1 187 aa14.77□□□□□ -0.05
RPF1-202ENST00000370656 ARHGEF18Q6ZSZ5 1173 aa14.77□□□□□ -0.05
RPF1-202ENST00000370656 RBM12BQ8IXT5 1001 aaKnown RBP14.77□□□□□ -0.05
RPF1-202ENST00000370656 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.77□□□□□ -0.05
RPF1-202ENST00000370656 CNTD1Q8N815 330 aa14.77□□□□□ -0.05
RPF1-202ENST00000370656 LPCAT1Q8NF37 534 aa14.77□□□□□ -0.05
RPF1-202ENST00000370656 CT55Q8WUE5 264 aa14.77□□□□□ -0.05
RPF1-202ENST00000370656 LRRN4Q8WUT4 740 aa14.77□□□□□ -0.05
RPF1-202ENST00000370656 FCRL4Q96PJ5 515 aa14.77□□□□□ -0.05
RPF1-202ENST00000370656 SLC29A3Q9BZD2 475 aa14.77□□□□□ -0.05
RPF1-202ENST00000370656 OR2AG1Q9H205 316 aa14.77□□□□□ -0.05
RPF1-202ENST00000370656 ACBD3Q9H3P7 528 aa14.77□□□□□ -0.05
RPF1-202ENST00000370656 ACSS2Q9NR19 701 aa14.77□□□□□ -0.05
RPF1-202ENST00000370656 POT1Q9NUX5 634 aa14.77□□□□□ -0.05
RPF1-202ENST00000370656 ATXN10Q9UBB4 475 aa14.77□□□□□ -0.05
RPF1-202ENST00000370656 RARRES3Q9UL19 164 aa14.77□□□□□ -0.05
RPF1-202ENST00000370656 G3BP2Q9UN86 482 aaKnown RBP14.77□□□□□ -0.05
RPF1-202ENST00000370656 PCDHGA9Q9Y5G4 932 aaKnown RBP14.77□□□□□ -0.05
RPF1-202ENST00000370656 SLC30A1Q9Y6M5 507 aa14.77□□□□□ -0.05
RPF1-202ENST00000370656 PDZK1P1A8MUH7 402 aa14.76□□□□□ -0.05
RPF1-202ENST00000370656 KCNK1O00180 336 aa14.76□□□□□ -0.05
RPF1-202ENST00000370656 RIPK2O43353 540 aa14.76□□□□□ -0.05
RPF1-202ENST00000370656 SLC25A14O95258 325 aaPredicted RBP14.76□□□□□ -0.05
RPF1-202ENST00000370656 ABHD2P08910 425 aa14.76□□□□□ -0.05
RPF1-202ENST00000370656 ZNF8P17098 575 aaPredicted RBP14.76□□□□□ -0.05
RPF1-202ENST00000370656 VARSP26640 1264 aaKnown RBP14.76□□□□□ -0.05
RPF1-202ENST00000370656 SLC19A1P41440 591 aa14.76□□□□□ -0.05
RPF1-202ENST00000370656 MAGEA4P43358 317 aa14.76□□□□□ -0.05
RPF1-202ENST00000370656 LEPRP48357 1165 aaKnown RBP14.76□□□□□ -0.05
RPF1-202ENST00000370656 EIF3BP55884 814 aaKnown RBP14.76□□□□□ -0.05
RPF1-202ENST00000370656 ARL4CP56559 192 aa14.76□□□□□ -0.05
RPF1-202ENST00000370656 PDE1BQ01064 536 aa14.76□□□□□ -0.05
RPF1-202ENST00000370656 DSC2Q02487 901 aa14.76□□□□□ -0.05
RPF1-202ENST00000370656 ZBTB17Q13105 803 aa14.76□□□□□ -0.05
RPF1-202ENST00000370656 UGT8Q16880 541 aa14.76□□□□□ -0.05
RPF1-202ENST00000370656 ITPRIPL1Q6GPH6 555 aa14.76□□□□□ -0.05
RPF1-202ENST00000370656 IRGCQ6NXR0 463 aa14.76□□□□□ -0.05
RPF1-202ENST00000370656 CENPUQ71F23 418 aa14.76□□□□□ -0.05
RPF1-202ENST00000370656 SYVN1Q86TM6 617 aa14.76□□□□□ -0.05
RPF1-202ENST00000370656 CAND1Q86VP6 1230 aaKnown RBP14.76□□□□□ -0.05
RPF1-202ENST00000370656 BPHLQ86WA6 291 aaPredicted RBP14.76□□□□□ -0.05
RPF1-202ENST00000370656 KLHL6Q8WZ60 621 aa14.76□□□□□ -0.05
RPF1-202ENST00000370656 LRRC39Q96DD0 335 aa14.76□□□□□ -0.05
RPF1-202ENST00000370656 ZIM3Q96PE6 472 aa14.76□□□□□ -0.05
RPF1-202ENST00000370656 PPP1R2P1Q96PQ5 205 aa14.76□□□□□ -0.05
RPF1-202ENST00000370656 GORASP1Q9BQQ3 440 aa14.76□□□□□ -0.05
RPF1-202ENST00000370656 MLPHQ9BV36 600 aaPredicted RBP14.76□□□□□ -0.05
RPF1-202ENST00000370656 SPATA16Q9BXB7 569 aa14.76□□□□□ -0.05
RPF1-202ENST00000370656 TRIM55Q9BYV6 548 aa14.76□□□□□ -0.05
RPF1-202ENST00000370656 GBA3Q9H227 469 aa14.76□□□□□ -0.05
RPF1-202ENST00000370656 TRIM39Q9HCM9 518 aa14.76□□□□□ -0.05
RPF1-202ENST00000370656 IGSF5Q9NSI5 407 aa14.76□□□□□ -0.05
RPF1-202ENST00000370656 RBM22Q9NW64 420 aaKnown RBP eCLIP14.76□□□□□ -0.05
RPF1-202ENST00000370656 MAP4K5Q9Y4K4 846 aa14.76□□□□□ -0.05
RPF1-202ENST00000370656 DOPEY1Q5JWR5 2465 aa14.75□□□□□ -0.05
RPF1-202ENST00000370656 KMOO15229 486 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms