RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 ZNF696Q9H7X3 374 aa10.48□□□□□ -0.73
TPM3-212ENST00000368533 ATAD3AQ9NVI7 634 aa10.48□□□□□ -0.73
TPM3-212ENST00000368533 DPP7Q9UHL4 492 aa10.48□□□□□ -0.73
TPM3-212ENST00000368533 MED16Q9Y2X0 877 aa10.48□□□□□ -0.73
TPM3-212ENST00000368533 RNF11Q9Y3C5 154 aa10.48□□□□□ -0.73
TPM3-212ENST00000368533 CORINQ9Y5Q5 1042 aa10.48□□□□□ -0.73
TPM3-212ENST00000368533 TARM1B6A8C7 271 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 C9JVG2 144 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 PLOD2O00469 737 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 ATE1O95260 518 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 ADH1CP00326 375 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 RBP1P09455 135 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 XPAP23025 273 aaPredicted RBP10.47□□□□□ -0.73
TPM3-212ENST00000368533 HMGCLP35914 325 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 ARL1P40616 181 aaPredicted RBP10.47□□□□□ -0.73
TPM3-212ENST00000368533 STX1BP61266 288 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 XIAPP98170 497 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 PTSQ03393 145 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 STX5Q13190 355 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 ITGADQ13349 1161 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 TSNQ15631 228 aaKnown RBP10.47□□□□□ -0.73
TPM3-212ENST00000368533 C18orf21Q32NC0 220 aaPredicted RBP10.47□□□□□ -0.73
TPM3-212ENST00000368533 SERPINA13PQ6UXR4 307 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 GDPD4Q6W3E5 623 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 CROCCP3Q8IVE0 287 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 DDIASQ8IXT1 998 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 YAF2Q8IY57 180 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 EEF1AKMT1Q8WVE0 214 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 SKA2Q8WVK7 121 aaPredicted RBP10.47□□□□□ -0.73
TPM3-212ENST00000368533 ATP6V1E2Q96A05 226 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 C12orf43Q96C57 262 aaKnown RBP10.47□□□□□ -0.73
TPM3-212ENST00000368533 MRPL38Q96DV4 380 aaKnown RBP10.47□□□□□ -0.73
TPM3-212ENST00000368533 BIRC8Q96P09 236 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 TNFRSF12AQ9NP84 129 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 ELOVL2Q9NXB9 296 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 KIF26AQ9ULI4 1882 aaPredicted RBP10.47□□□□□ -0.73
TPM3-212ENST00000368533 GLYATL1P3A0A0U1RQE8 302 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 E7ENX8 843 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 BTN3A1O00481 513 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 GAPDHSO14556 408 aaPredicted RBP10.47□□□□□ -0.73
TPM3-212ENST00000368533 INPP4BO15327 924 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 NPHS1O60500 1241 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 HK2P52789 917 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 ST8SIA6P61647 398 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 RPS6KA2Q15349 733 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 SF3B4Q15427 424 aaKnown RBP eCLIP10.47□□□□□ -0.731e-13■■□□□ 12.6
TPM3-212ENST00000368533 CARTPTQ16568 116 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 PFKFB4Q16877 469 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 ATP13A5Q4VNC0 1218 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 PTRHD1Q6GMV3 140 aaKnown RBP10.47□□□□□ -0.73
TPM3-212ENST00000368533 KIAA0408Q6ZU52 694 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 MYO1HQ8N1T3 1032 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 TMCO5AQ8N6Q1 288 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 BEND7Q8N7W2 519 aaPredicted RBP10.47□□□□□ -0.73
TPM3-212ENST00000368533 LEMD2Q8NC56 503 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 DDHD1Q8NEL9 900 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 NSUN5Q96P11 429 aaKnown RBP10.47□□□□□ -0.73
TPM3-212ENST00000368533 SLC39A3Q9BRY0 314 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 AARSD1Q9BTE6 412 aaKnown RBP10.47□□□□□ -0.73
TPM3-212ENST00000368533 NAA50Q9GZZ1 169 aaKnown RBP10.47□□□□□ -0.73
TPM3-212ENST00000368533 TRAF6Q9Y4K3 522 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 TIMM22Q9Y584 194 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 SNX13Q9Y5W8 968 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 HTRA2O43464 458 aaPredicted RBP10.47□□□□□ -0.73
TPM3-212ENST00000368533 CRCPO75575 148 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 SEC24DO94855 1032 aaPredicted RBP10.47□□□□□ -0.73
TPM3-212ENST00000368533 POP4O95707 220 aaKnown RBP10.47□□□□□ -0.73
TPM3-212ENST00000368533 GUCA1CO95843 209 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 ACVR1Q04771 509 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 RAD51Q06609 339 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 ADGRE1Q14246 886 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 SETMARQ53H47 684 aaPredicted RBP10.47□□□□□ -0.73
TPM3-212ENST00000368533 FGD3Q5JSP0 725 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 LDLRAP1Q5SW96 308 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 ZFP1Q6P2D0 407 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 GPR149Q86SP6 731 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 MMAAQ8IVH4 418 aaKnown RBP10.47□□□□□ -0.73
TPM3-212ENST00000368533 CPSF7Q8N684 471 aaKnown RBP10.47□□□□□ -0.73
TPM3-212ENST00000368533 GFM2Q969S9 779 aaKnown RBP10.47□□□□□ -0.73
TPM3-212ENST00000368533 ZNF576Q9H609 170 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 PCDH12Q9NPG4 1184 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 GIMAP2Q9UG22 337 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 POU2F3Q9UKI9 436 aa10.47□□□□□ -0.73
TPM3-212ENST00000368533 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.46□□□□□ -0.73
TPM3-212ENST00000368533 C7orf72A4D263 438 aa10.46□□□□□ -0.73
TPM3-212ENST00000368533 SUPT3HB4E1H0 165 aa10.46□□□□□ -0.73
TPM3-212ENST00000368533 SLC9A3R1O14745 358 aaPredicted RBP10.46□□□□□ -0.73
TPM3-212ENST00000368533 MRASO14807 208 aa10.46□□□□□ -0.73
TPM3-212ENST00000368533 CASQ2O14958 399 aaPredicted RBP10.46□□□□□ -0.73
TPM3-212ENST00000368533 CISD3P0C7P0 127 aa10.46□□□□□ -0.73
TPM3-212ENST00000368533 GFAPP14136 432 aa10.46□□□□□ -0.73
TPM3-212ENST00000368533 ZNF37AP17032 561 aaPredicted RBP10.46□□□□□ -0.73
TPM3-212ENST00000368533 PSMC3P17980 439 aa10.46□□□□□ -0.73
TPM3-212ENST00000368533 FCARP24071 287 aa10.46□□□□□ -0.73
TPM3-212ENST00000368533 AGTR2P50052 363 aa10.46□□□□□ -0.73
TPM3-212ENST00000368533 KCNC3Q14003 757 aa10.46□□□□□ -0.73
TPM3-212ENST00000368533 TCEA2Q15560 299 aa10.46□□□□□ -0.73
TPM3-212ENST00000368533 TECRLQ5HYJ1 363 aa10.46□□□□□ -0.73
TPM3-212ENST00000368533 IL23RQ5VWK5 629 aa10.46□□□□□ -0.73
TPM3-212ENST00000368533 FAM45BPQ6NSW5 357 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms