RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 NCKIPSDQ9NZQ3 722 aa11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 FKBPLQ9UIM3 349 aa11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 MID2Q9UJV3 735 aa11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 ACOT9Q9Y305 439 aa11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 VWA7Q9Y334 891 aa11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 ITPR3Q14573 2671 aa11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 ZNF106Q9H2Y7 1883 aaKnown RBP11.06□□□□□ -0.64
CSNK1E-202ENST00000366216 ARHGEF17Q96PE2 2063 aaPredicted RBP11.06□□□□□ -0.64
CSNK1E-202ENST00000366216 CPED1A4D0V7 1026 aa11.06□□□□□ -0.64
CSNK1E-202ENST00000366216 PLRG1O43660 514 aaKnown RBP11.06□□□□□ -0.64
CSNK1E-202ENST00000366216 SNX3O60493 162 aa11.06□□□□□ -0.64
CSNK1E-202ENST00000366216 EDF1O60869 148 aaKnown RBP11.06□□□□□ -0.64
CSNK1E-202ENST00000366216 RNGTTO60942 597 aaKnown RBP11.06□□□□□ -0.64
CSNK1E-202ENST00000366216 ALPIP09923 528 aa11.06□□□□□ -0.64
CSNK1E-202ENST00000366216 NFKBIAP25963 317 aa11.06□□□□□ -0.64
CSNK1E-202ENST00000366216 SLC5A2P31639 672 aa11.06□□□□□ -0.64
CSNK1E-202ENST00000366216 MC4RP32245 332 aa11.06□□□□□ -0.64
CSNK1E-202ENST00000366216 SLC26A3P40879 764 aa11.06□□□□□ -0.64
CSNK1E-202ENST00000366216 TTPAP49638 278 aa11.06□□□□□ -0.64
CSNK1E-202ENST00000366216 PDX1P52945 283 aa11.06□□□□□ -0.64
CSNK1E-202ENST00000366216 XIAPP98170 497 aa11.06□□□□□ -0.64
CSNK1E-202ENST00000366216 CACNG1Q06432 222 aa11.06□□□□□ -0.64
CSNK1E-202ENST00000366216 PEX6Q13608 980 aa11.06□□□□□ -0.64
CSNK1E-202ENST00000366216 SEMA3AQ14563 771 aa11.06□□□□□ -0.64
CSNK1E-202ENST00000366216 TGIF1Q15583 401 aa11.06□□□□□ -0.64
CSNK1E-202ENST00000366216 IGFBP7Q16270 282 aa11.06□□□□□ -0.64
CSNK1E-202ENST00000366216 TSNAXIP1Q2TAA8 658 aa11.06□□□□□ -0.64
CSNK1E-202ENST00000366216 HECTD2Q5U5R9 776 aa11.06□□□□□ -0.64
CSNK1E-202ENST00000366216 ATG16L1Q676U5 607 aa11.06□□□□□ -0.64
CSNK1E-202ENST00000366216 ZCCHC8Q6NZY4 707 aaKnown RBP11.06□□□□□ -0.64
CSNK1E-202ENST00000366216 GUSBP11Q6P575 273 aa11.06□□□□□ -0.64
CSNK1E-202ENST00000366216 EFL1Q7Z2Z2 1120 aaKnown RBP11.06□□□□□ -0.64
CSNK1E-202ENST00000366216 LYSMD3Q7Z3D4 306 aa11.06□□□□□ -0.64
CSNK1E-202ENST00000366216 NUDCD3Q8IVD9 361 aa11.06□□□□□ -0.64
CSNK1E-202ENST00000366216 CACNA2D3Q8IZS8 1091 aa11.06□□□□□ -0.64
CSNK1E-202ENST00000366216 SLC22A18ASQ8N1D0 253 aa11.06□□□□□ -0.64
CSNK1E-202ENST00000366216 PLD6Q8N2A8 252 aaKnown RBP11.06□□□□□ -0.64
CSNK1E-202ENST00000366216 PAF1Q8N7H5 531 aa11.06□□□□□ -0.64
CSNK1E-202ENST00000366216 ZSCAN1Q8NBB4 408 aa11.06□□□□□ -0.64
CSNK1E-202ENST00000366216 CHST14Q8NCH0 376 aa11.06□□□□□ -0.64
CSNK1E-202ENST00000366216 RDH11Q8TC12 318 aa11.06□□□□□ -0.64
CSNK1E-202ENST00000366216 KLK6Q92876 244 aa11.06□□□□□ -0.64
CSNK1E-202ENST00000366216 EID2BQ96D98 161 aa11.06□□□□□ -0.64
CSNK1E-202ENST00000366216 SEC16BQ96JE7 1060 aa11.06□□□□□ -0.64
CSNK1E-202ENST00000366216 TSNARE1Q96NA8 513 aa11.06□□□□□ -0.64
CSNK1E-202ENST00000366216 MYOCQ99972 504 aa11.06□□□□□ -0.64
CSNK1E-202ENST00000366216 TMEM216Q9P0N5 145 aa11.06□□□□□ -0.64
CSNK1E-202ENST00000366216 DKK3Q9UBP4 350 aa11.06□□□□□ -0.64
CSNK1E-202ENST00000366216 APPL1Q9UKG1 709 aa11.06□□□□□ -0.64
CSNK1E-202ENST00000366216 PCDHGA7Q9Y5G6 932 aa11.06□□□□□ -0.64
CSNK1E-202ENST00000366216 PCDHGA4Q9Y5G9 962 aa11.06□□□□□ -0.64
CSNK1E-202ENST00000366216 WASF2Q9Y6W5 498 aa11.06□□□□□ -0.64
CSNK1E-202ENST00000366216 C1orf232A0A0U1RR37 186 aa11.05□□□□□ -0.64
CSNK1E-202ENST00000366216 WDR91A4D1P6 747 aa11.05□□□□□ -0.64
CSNK1E-202ENST00000366216 EBAG9O00559 213 aa11.05□□□□□ -0.64
CSNK1E-202ENST00000366216 PHGDHO43175 533 aaKnown RBP11.05□□□□□ -0.64
CSNK1E-202ENST00000366216 BNIP3LO60238 219 aa11.05□□□□□ -0.64
CSNK1E-202ENST00000366216 NDUFS3O75489 264 aa11.05□□□□□ -0.64
CSNK1E-202ENST00000366216 KLHL2O95198 593 aa11.05□□□□□ -0.64
CSNK1E-202ENST00000366216 WISP3O95389 354 aaPredicted RBP11.05□□□□□ -0.64
CSNK1E-202ENST00000366216 UGT2B4P06133 528 aa11.05□□□□□ -0.64
CSNK1E-202ENST00000366216 NEFHP12036 1026 aa11.05□□□□□ -0.64
CSNK1E-202ENST00000366216 WT1P19544 449 aaPredicted RBP11.05□□□□□ -0.64
CSNK1E-202ENST00000366216 BGNP21810 368 aa11.05□□□□□ -0.64
CSNK1E-202ENST00000366216 CD9P21926 228 aa11.05□□□□□ -0.64
CSNK1E-202ENST00000366216 FDXRP22570 491 aa11.05□□□□□ -0.64
CSNK1E-202ENST00000366216 SUOXP51687 545 aa11.05□□□□□ -0.64
CSNK1E-202ENST00000366216 KPNA2P52292 529 aaKnown RBP11.05□□□□□ -0.64
CSNK1E-202ENST00000366216 ADARP55265 1226 aaKnown RBP11.05□□□□□ -0.64
CSNK1E-202ENST00000366216 ELAVL3Q14576 367 aaKnown RBP11.05□□□□□ -0.64
CSNK1E-202ENST00000366216 ITIH4Q14624 930 aa11.05□□□□□ -0.64
CSNK1E-202ENST00000366216 CLCA4Q14CN2 919 aa11.05□□□□□ -0.64
CSNK1E-202ENST00000366216 PTPRRQ15256 657 aa11.05□□□□□ -0.64
CSNK1E-202ENST00000366216 ZNF542PQ5EBM4 170 aa11.05□□□□□ -0.64
CSNK1E-202ENST00000366216 RBM20Q5T481 1227 aaKnown RBP11.05□□□□□ -0.64
CSNK1E-202ENST00000366216 AGBL4Q5VU57 503 aa11.05□□□□□ -0.64
CSNK1E-202ENST00000366216 ZDHHC20Q5W0Z9 365 aa11.05□□□□□ -0.64
CSNK1E-202ENST00000366216 HIST2H2BCQ6DN03 193 aa11.05□□□□□ -0.64
CSNK1E-202ENST00000366216 C16orf46Q6P387 395 aa11.05□□□□□ -0.64
CSNK1E-202ENST00000366216 CRTC1Q6UUV9 634 aa11.05□□□□□ -0.64
CSNK1E-202ENST00000366216 CERS6Q6ZMG9 384 aa11.05□□□□□ -0.64
CSNK1E-202ENST00000366216 MICALCLQ6ZW33 695 aa11.05□□□□□ -0.64
CSNK1E-202ENST00000366216 LDB1Q86U70 411 aaPredicted RBP11.05□□□□□ -0.64
CSNK1E-202ENST00000366216 PTRH1Q86Y79 214 aaKnown RBP11.05□□□□□ -0.64
CSNK1E-202ENST00000366216 CEP97Q8IW35 865 aa11.05□□□□□ -0.64
CSNK1E-202ENST00000366216 CCDC63Q8NA47 563 aa11.05□□□□□ -0.64
CSNK1E-202ENST00000366216 CCDC197Q8NCU1 140 aa11.05□□□□□ -0.64
CSNK1E-202ENST00000366216 GRIN3AQ8TCU5 1115 aa11.05□□□□□ -0.64
CSNK1E-202ENST00000366216 LPGAT1Q92604 370 aa11.05□□□□□ -0.64
CSNK1E-202ENST00000366216 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.05□□□□□ -0.64
CSNK1E-202ENST00000366216 KLHL32Q96NJ5 620 aa11.05□□□□□ -0.64
CSNK1E-202ENST00000366216 ELAC2Q9BQ52 826 aaKnown RBP11.05□□□□□ -0.64
CSNK1E-202ENST00000366216 AARSD1Q9BTE6 412 aaKnown RBP11.05□□□□□ -0.64
CSNK1E-202ENST00000366216 NMRAL1Q9HBL8 299 aa11.05□□□□□ -0.64
CSNK1E-202ENST00000366216 BPIFA1Q9NP55 256 aa11.05□□□□□ -0.64
CSNK1E-202ENST00000366216 FZD3Q9NPG1 666 aa11.05□□□□□ -0.64
CSNK1E-202ENST00000366216 COPG2Q9UBF2 871 aa11.05□□□□□ -0.64
CSNK1E-202ENST00000366216 IL36AQ9UHA7 158 aa11.05□□□□□ -0.64
CSNK1E-202ENST00000366216 ACSL6Q9UKU0 697 aa11.05□□□□□ -0.64
CSNK1E-202ENST00000366216 COMMD10Q9Y6G5 202 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms