RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 SEC24AO95486 1093 aa6.92□□□□□ -1.3
RAB5B-201ENST00000360299 CER1O95813 267 aa6.92□□□□□ -1.3
RAB5B-201ENST00000360299 PRKCGP05129 697 aa6.92□□□□□ -1.3
RAB5B-201ENST00000360299 SRFP11831 508 aa6.92□□□□□ -1.3
RAB5B-201ENST00000360299 TSPAN8P19075 237 aa6.92□□□□□ -1.3
RAB5B-201ENST00000360299 GNAZP19086 355 aa6.92□□□□□ -1.3
RAB5B-201ENST00000360299 FGFR3P22607 806 aa6.92□□□□□ -1.3
RAB5B-201ENST00000360299 NDUFS1P28331 727 aa6.92□□□□□ -1.3
RAB5B-201ENST00000360299 KCNJ2P63252 427 aa6.92□□□□□ -1.3
RAB5B-201ENST00000360299 NFATC2Q13469 925 aa6.92□□□□□ -1.3
RAB5B-201ENST00000360299 NAE1Q13564 534 aa6.92□□□□□ -1.3
RAB5B-201ENST00000360299 ATP13A5Q4VNC0 1218 aa6.92□□□□□ -1.3
RAB5B-201ENST00000360299 MTX3Q5HYI7 312 aa6.92□□□□□ -1.3
RAB5B-201ENST00000360299 PRAMEF14Q5SWL7 426 aa6.92□□□□□ -1.3
RAB5B-201ENST00000360299 RTL10Q7L3V2 364 aa6.92□□□□□ -1.3
RAB5B-201ENST00000360299 RTN4RL1Q86UN2 441 aaPredicted RBP6.92□□□□□ -1.3
RAB5B-201ENST00000360299 ZC3HC1Q86WB0 502 aaKnown RBP6.92□□□□□ -1.3
RAB5B-201ENST00000360299 TMEM173Q86WV6 379 aaPredicted RBP6.92□□□□□ -1.3
RAB5B-201ENST00000360299 SAMD14Q8IZD0 417 aaPredicted RBP6.92□□□□□ -1.3
RAB5B-201ENST00000360299 NATD1Q8N6N6 113 aa6.92□□□□□ -1.3
RAB5B-201ENST00000360299 KBTBD7Q8WVZ9 684 aa6.92□□□□□ -1.3
RAB5B-201ENST00000360299 EDAQ92838 391 aa6.92□□□□□ -1.3
RAB5B-201ENST00000360299 KCNN1Q92952 543 aa6.92□□□□□ -1.3
RAB5B-201ENST00000360299 TPD52L3Q96J77 140 aa6.92□□□□□ -1.3
RAB5B-201ENST00000360299 ZNF641Q96N77 438 aaPredicted RBP6.92□□□□□ -1.3
RAB5B-201ENST00000360299 PSKH2Q96QS6 385 aa6.92□□□□□ -1.3
RAB5B-201ENST00000360299 TBCDQ9BTW9 1192 aa6.92□□□□□ -1.3
RAB5B-201ENST00000360299 SLC2A11Q9BYW1 496 aa6.92□□□□□ -1.3
RAB5B-201ENST00000360299 HAPLN2Q9GZV7 340 aa6.92□□□□□ -1.3
RAB5B-201ENST00000360299 EPB41L4BQ9H329 900 aa6.92□□□□□ -1.3
RAB5B-201ENST00000360299 RC3H2Q9HBD1 1191 aaKnown RBP6.92□□□□□ -1.3
RAB5B-201ENST00000360299 SEMA3GQ9NS98 782 aa6.92□□□□□ -1.3
RAB5B-201ENST00000360299 OXSMQ9NWU1 459 aa6.92□□□□□ -1.3
RAB5B-201ENST00000360299 MYO7AQ13402 2215 aa6.92□□□□□ -1.3
RAB5B-201ENST00000360299 ZNF840PA6NDX5 716 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 HS6ST1O60243 411 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 SOX6P35712 828 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 CHRNA4P43681 627 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 POLR2JP52435 117 aaKnown RBP6.91□□□□□ -1.3
RAB5B-201ENST00000360299 MBTPS1Q14703 1052 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 MYLK3Q32MK0 819 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 LRIT3Q3SXY7 679 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 PM20D1Q6GTS8 502 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 GCNT7Q6ZNI0 430 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 KBTBD6Q86V97 674 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 CHCHD4Q8N4Q1 142 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 AARSD1Q9BTE6 412 aaKnown RBP6.91□□□□□ -1.3
RAB5B-201ENST00000360299 FAM192AQ9GZU8 254 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 WDR55Q9H6Y2 383 aaPredicted RBP6.91□□□□□ -1.3
RAB5B-201ENST00000360299 NOL11Q9H8H0 719 aaKnown RBP6.91□□□□□ -1.3
RAB5B-201ENST00000360299 POLR3BQ9NW08 1133 aaPredicted RBP6.91□□□□□ -1.3
RAB5B-201ENST00000360299 PSMD13Q9UNM6 376 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 SAMD4AQ9UPU9 718 aaKnown RBP6.91□□□□□ -1.3
RAB5B-201ENST00000360299 PCDHGB3Q9Y5G1 929 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 STON1Q9Y6Q2 735 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 WDR90Q96KV7 1748 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 TCRBV7S3A2A0A539 114 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 K7EPI3 171 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 DCLK1O15075 740 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 RRP8O43159 456 aaKnown RBP6.91□□□□□ -1.3
RAB5B-201ENST00000360299 IFNA16P05015 189 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 MAOBP27338 520 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 DPP6P42658 865 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 C1orf61Q13536 156 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 HERC3Q15034 1050 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 C1orf53Q5VUE5 145 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 CCDC81Q6ZN84 652 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 CPNE9Q8IYJ1 553 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 FBXL6Q8N531 539 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 EFCAB3Q8N7B9 438 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 ADCY4Q8NFM4 1077 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 SHKBP1Q8TBC3 707 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 TRAPPC9Q96Q05 1148 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 ROGDIQ9GZN7 287 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 PCDH12Q9NPG4 1184 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 ARL8BQ9NVJ2 186 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 MTMR10Q9NXD2 777 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 DUSP12Q9UNI6 340 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 ZNF780BQ9Y6R6 833 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 POLR2AP24928 1970 aaKnown RBP6.91□□□□□ -1.3
RAB5B-201ENST00000360299 A6NCN8 305 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 J3KR12 359 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 TK2O00142 265 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 MMP20O60882 483 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 KERAO60938 352 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 NTRK1P04629 796 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 ENO2P09104 434 aaPredicted RBP6.91□□□□□ -1.3
RAB5B-201ENST00000360299 ZCCHC18P0CG32 403 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 ANPEPP15144 967 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 ITGAXP20702 1163 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 CMPK1P30085 196 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 VIPR1P32241 457 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 HNF4AP41235 474 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 CAPZA2P47755 286 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 SLC7A2P52569 658 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 CACNA2D1P54289 1103 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 HERVK_113P63132 956 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 SRSF11Q05519 484 aaKnown RBP6.91□□□□□ -1.3
RAB5B-201ENST00000360299 SPEM2Q0P670 501 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 TSNQ15631 228 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms