RNA–Protein interactions for RNA: ENST00000357886.8

CDK5RAP1-203, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 5 BASIC

Gene CDK5RAP1, Length 2,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-203ENST00000357886 RETREG1Q9H6L5 497 aa13.17□□□□□ -0.3
CDK5RAP1-203ENST00000357886 ACTR8Q9H981 624 aa13.17□□□□□ -0.3
CDK5RAP1-203ENST00000357886 PALMDQ9NP74 551 aa13.17□□□□□ -0.3
CDK5RAP1-203ENST00000357886 LIMD1Q9UGP4 676 aa13.17□□□□□ -0.3
CDK5RAP1-203ENST00000357886 PDE10AQ9Y233 779 aa13.17□□□□□ -0.3
CDK5RAP1-203ENST00000357886 SLC38A8A6NNN8 435 aa13.17□□□□□ -0.3
CDK5RAP1-203ENST00000357886 K7EPI3 171 aa13.17□□□□□ -0.3
CDK5RAP1-203ENST00000357886 CBX4O00257 560 aa13.17□□□□□ -0.3
CDK5RAP1-203ENST00000357886 CLDN11O75508 207 aa13.17□□□□□ -0.3
CDK5RAP1-203ENST00000357886 CLPXO76031 633 aa13.17□□□□□ -0.3
CDK5RAP1-203ENST00000357886 PRKD3O94806 890 aa13.17□□□□□ -0.3
CDK5RAP1-203ENST00000357886 RHOCP08134 193 aa13.17□□□□□ -0.3
CDK5RAP1-203ENST00000357886 PCMT1P22061 227 aa13.17□□□□□ -0.3
CDK5RAP1-203ENST00000357886 NRIP1P48552 1158 aa13.17□□□□□ -0.3
CDK5RAP1-203ENST00000357886 PIK3CGP48736 1102 aa13.17□□□□□ -0.3
CDK5RAP1-203ENST00000357886 GZMMP51124 257 aa13.17□□□□□ -0.3
CDK5RAP1-203ENST00000357886 ISL1P61371 349 aa13.17□□□□□ -0.3
CDK5RAP1-203ENST00000357886 DUSP4Q13115 394 aa13.17□□□□□ -0.3
CDK5RAP1-203ENST00000357886 MTA1Q13330 715 aa13.17□□□□□ -0.3
CDK5RAP1-203ENST00000357886 BFSP2Q13515 415 aa13.17□□□□□ -0.3
CDK5RAP1-203ENST00000357886 SPANXN4Q5MJ08 99 aa13.17□□□□□ -0.3
CDK5RAP1-203ENST00000357886 CXorf57Q6NSI4 855 aaKnown RBP13.17□□□□□ -0.3
CDK5RAP1-203ENST00000357886 NCEH1Q6PIU2 408 aa13.17□□□□□ -0.3
CDK5RAP1-203ENST00000357886 SUSD1Q6UWL2 747 aa13.17□□□□□ -0.3
CDK5RAP1-203ENST00000357886 MILR1Q7Z6M3 343 aa13.17□□□□□ -0.3
CDK5RAP1-203ENST00000357886 DENND1CQ8IV53 801 aa13.17□□□□□ -0.3
CDK5RAP1-203ENST00000357886 KRTCAP2Q8N6L1 136 aa13.17□□□□□ -0.3
CDK5RAP1-203ENST00000357886 FUNDC2Q9BWH2 189 aa13.17□□□□□ -0.3
CDK5RAP1-203ENST00000357886 TTLL2Q9BWV7 592 aa13.17□□□□□ -0.3
CDK5RAP1-203ENST00000357886 ADGRE3Q9BY15 652 aa13.17□□□□□ -0.3
CDK5RAP1-203ENST00000357886 SPC25Q9HBM1 224 aa13.17□□□□□ -0.3
CDK5RAP1-203ENST00000357886 LHX3Q9UBR4 397 aa13.17□□□□□ -0.3
CDK5RAP1-203ENST00000357886 TMEFF2Q9UIK5 374 aaPredicted RBP13.17□□□□□ -0.3
CDK5RAP1-203ENST00000357886 GNPTGQ9UJJ9 305 aa13.17□□□□□ -0.3
CDK5RAP1-203ENST00000357886 FBXO10Q9UK96 956 aa13.17□□□□□ -0.3
CDK5RAP1-203ENST00000357886 COQ6Q9Y2Z9 468 aa13.17□□□□□ -0.3
CDK5RAP1-203ENST00000357886 SH3GLB1Q9Y371 365 aa13.17□□□□□ -0.3
CDK5RAP1-203ENST00000357886 ELOVL7A1L3X0 281 aa13.16□□□□□ -0.3
CDK5RAP1-203ENST00000357886 FUOMA2VDF0 154 aa13.16□□□□□ -0.3
CDK5RAP1-203ENST00000357886 CXCR6O00574 342 aa13.16□□□□□ -0.3
CDK5RAP1-203ENST00000357886 PRMT5O14744 637 aaPredicted RBP13.16□□□□□ -0.3
CDK5RAP1-203ENST00000357886 SEPT4O43236 478 aa13.16□□□□□ -0.3
CDK5RAP1-203ENST00000357886 FZD6O60353 706 aa13.16□□□□□ -0.3
CDK5RAP1-203ENST00000357886 BMP1P13497 986 aa13.16□□□□□ -0.3
CDK5RAP1-203ENST00000357886 MSH3P20585 1137 aa13.16□□□□□ -0.3
CDK5RAP1-203ENST00000357886 HTR1BP28222 390 aa13.16□□□□□ -0.3
CDK5RAP1-203ENST00000357886 DCTP40126 519 aa13.16□□□□□ -0.3
CDK5RAP1-203ENST00000357886 GDF5P43026 501 aa13.16□□□□□ -0.3
CDK5RAP1-203ENST00000357886 PHEXP78562 749 aa13.16□□□□□ -0.3
CDK5RAP1-203ENST00000357886 HMGCS1Q01581 520 aa13.16□□□□□ -0.3
CDK5RAP1-203ENST00000357886 CACNG1Q06432 222 aa13.16□□□□□ -0.3
CDK5RAP1-203ENST00000357886 PON2Q15165 354 aa13.16□□□□□ -0.3
CDK5RAP1-203ENST00000357886 CST9Q5W186 159 aa13.16□□□□□ -0.3
CDK5RAP1-203ENST00000357886 LINGO4Q6UY18 593 aa13.16□□□□□ -0.3
CDK5RAP1-203ENST00000357886 RNF165Q6ZSG1 346 aa13.16□□□□□ -0.3
CDK5RAP1-203ENST00000357886 CALHM3Q86XJ0 350 aa13.16□□□□□ -0.3
CDK5RAP1-203ENST00000357886 GALNT13Q8IUC8 556 aa13.16□□□□□ -0.3
CDK5RAP1-203ENST00000357886 STK40Q8N2I9 435 aa13.16□□□□□ -0.3
CDK5RAP1-203ENST00000357886 SVOPLQ8N434 492 aa13.16□□□□□ -0.3
CDK5RAP1-203ENST00000357886 CARNMT1Q8N4J0 409 aa13.16□□□□□ -0.3
CDK5RAP1-203ENST00000357886 CHCHD4Q8N4Q1 142 aa13.16□□□□□ -0.3
CDK5RAP1-203ENST00000357886 NAT16Q8N8M0 369 aa13.16□□□□□ -0.3
CDK5RAP1-203ENST00000357886 KLHL23Q8NBE8 558 aa13.16□□□□□ -0.3
CDK5RAP1-203ENST00000357886 FBLIM1Q8WUP2 373 aa13.16□□□□□ -0.3
CDK5RAP1-203ENST00000357886 WBP2Q969T9 261 aa13.16□□□□□ -0.3
CDK5RAP1-203ENST00000357886 MAGED4Q96JG8 741 aa13.16□□□□□ -0.3
CDK5RAP1-203ENST00000357886 THUMPD3Q9BV44 507 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP1-203ENST00000357886 BOCQ9BWV1 1114 aa13.16□□□□□ -0.3
CDK5RAP1-203ENST00000357886 CLMPQ9H6B4 373 aa13.16□□□□□ -0.3
CDK5RAP1-203ENST00000357886 DCAF13Q9NV06 445 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP1-203ENST00000357886 MARCH5Q9NX47 278 aa13.16□□□□□ -0.3
CDK5RAP1-203ENST00000357886 DNMT3LQ9UJW3 386 aa13.16□□□□□ -0.3
CDK5RAP1-203ENST00000357886 ZNF711Q9Y462 761 aa13.16□□□□□ -0.3
CDK5RAP1-203ENST00000357886 FFAR3O14843 346 aa13.15□□□□□ -0.3
CDK5RAP1-203ENST00000357886 GPR42O15529 346 aa13.15□□□□□ -0.3
CDK5RAP1-203ENST00000357886 TSPAN3O60637 253 aa13.15□□□□□ -0.3
CDK5RAP1-203ENST00000357886 BCAS1O75363 584 aaPredicted RBP13.15□□□□□ -0.3
CDK5RAP1-203ENST00000357886 SCELO95171 688 aa13.15□□□□□ -0.3
CDK5RAP1-203ENST00000357886 PRKACGP22612 351 aa13.15□□□□□ -0.3
CDK5RAP1-203ENST00000357886 GGT5P36269 586 aa13.15□□□□□ -0.3
CDK5RAP1-203ENST00000357886 ATP5C1P36542 298 aaKnown RBP13.15□□□□□ -0.3
CDK5RAP1-203ENST00000357886 CCR3P51677 355 aa13.15□□□□□ -0.3
CDK5RAP1-203ENST00000357886 GP2P55259 537 aaKnown RBP13.15□□□□□ -0.3
CDK5RAP1-203ENST00000357886 PHC1P78364 1004 aa13.15□□□□□ -0.3
CDK5RAP1-203ENST00000357886 RELAQ04206 551 aa13.15□□□□□ -0.3
CDK5RAP1-203ENST00000357886 EPS8Q12929 822 aa13.15□□□□□ -0.3
CDK5RAP1-203ENST00000357886 MAPKAPK3Q16644 382 aa13.15□□□□□ -0.3
CDK5RAP1-203ENST00000357886 PHKG1Q16816 387 aa13.15□□□□□ -0.3
CDK5RAP1-203ENST00000357886 SMU1Q2TAY7 513 aa13.15□□□□□ -0.3
CDK5RAP1-203ENST00000357886 SPESP1Q6UW49 350 aa13.15□□□□□ -0.3
CDK5RAP1-203ENST00000357886 DNAJC14Q6Y2X3 702 aaPredicted RBP13.15□□□□□ -0.3
CDK5RAP1-203ENST00000357886 FKBP9P1Q75LS8 142 aa13.15□□□□□ -0.3
CDK5RAP1-203ENST00000357886 GPR149Q86SP6 731 aa13.15□□□□□ -0.3
CDK5RAP1-203ENST00000357886 MICU2Q8IYU8 434 aa13.15□□□□□ -0.3
CDK5RAP1-203ENST00000357886 PHACTR4Q8IZ21 702 aa13.15□□□□□ -0.3
CDK5RAP1-203ENST00000357886 LIX1Q8N485 282 aa13.15□□□□□ -0.3
CDK5RAP1-203ENST00000357886 PDZD8Q8NEN9 1154 aa13.15□□□□□ -0.3
CDK5RAP1-203ENST00000357886 FRS2Q8WU20 508 aa13.15□□□□□ -0.3
CDK5RAP1-203ENST00000357886 RBM4BQ9BQ04 359 aaKnown RBP13.15□□□□□ -0.3
CDK5RAP1-203ENST00000357886 TBCDQ9BTW9 1192 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms