RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 PROX2Q3B8N5 592 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 ACOT1Q86TX2 421 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 DENND6BQ8NEG7 585 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 RTFDC1Q9BY42 306 aaPredicted RBP6.48□□□□□ -1.37
VPS13B-202ENST00000357162 COMMD4Q9H0A8 199 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 FAM159BA6NKW6 160 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 FPGTO14772 594 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 HLA-DQA1Q5Y7H0 255 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 KLHL36Q8N4N3 616 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 CEP76Q8TAP6 659 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 ELMO1Q92556 727 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 CIB1Q99828 191 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 ARMC1Q9NVT9 282 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 ACSL5Q9ULC5 683 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 HCN4Q9Y3Q4 1203 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 MAGEB17A8MXT2 336 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 KRT33AO76009 404 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 ACADMP11310 421 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 IL32P24001 234 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 L1CAMP32004 1257 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 CYP4F3Q08477 520 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 FAM76BQ5HYJ3 339 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 UNC5DQ6UXZ4 953 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 PTAR1Q7Z6K3 402 aaPredicted RBP6.48□□□□□ -1.37
VPS13B-202ENST00000357162 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.48□□□□□ -1.37
VPS13B-202ENST00000357162 C12orf43Q96C57 262 aaKnown RBP6.48□□□□□ -1.37
VPS13B-202ENST00000357162 ARL5BQ96KC2 179 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 RNF38Q9H0F5 515 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 PREBQ9HCU5 417 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 KLQ9UEF7 1012 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 NCKAP1Q9Y2A7 1128 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 RFPL2O75678 378 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 KCNJ11Q14654 390 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 IFI44LQ53G44 452 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 OR8J1Q8NGP2 316 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 CORO1BQ9BR76 489 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 MFSD1Q9H3U5 465 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 TSPAN4O14817 238 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 TIPRLO75663 272 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 CBSLP0DN79 551 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 CBSP35520 551 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 RPS5P46782 204 aaKnown RBP6.47□□□□□ -1.37
VPS13B-202ENST00000357162 CRISP3P54108 245 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 GPRC6AQ5T6X5 926 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 ANKFN1Q8N957 763 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 SLC35B2Q8TB61 432 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 C2orf15Q8WU43 125 aaKnown RBP6.47□□□□□ -1.37
VPS13B-202ENST00000357162 TMEM209Q96SK2 561 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 IL25Q9H293 177 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 PXDNQ92626 1479 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 PPP5CP53041 499 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 PGM5Q15124 567 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 KIAA1614Q5VZ46 1190 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 LRRC70Q7Z2Q7 622 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 GALNT7Q86SF2 657 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 SDR16C5Q8N3Y7 309 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 CARNMT1Q8N4J0 409 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 HAS1Q92839 578 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 CNTN3Q9P232 1028 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 KCNN3Q9UGI6 736 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 RYKP34925 604 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 ARSFP54793 590 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 KCNC3Q14003 757 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 DLG2Q15700 870 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 CRTC2Q53ET0 693 aaPredicted RBP6.47□□□□□ -1.37
VPS13B-202ENST00000357162 DNAJC14Q6Y2X3 702 aaPredicted RBP6.47□□□□□ -1.37
VPS13B-202ENST00000357162 TSPYL5Q86VY4 417 aaPredicted RBP6.47□□□□□ -1.37
VPS13B-202ENST00000357162 RHEBL1Q8TAI7 183 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 FBXO30Q8TB52 745 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 ASB15Q8WXK1 588 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 KCNN1Q92952 543 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 MARK1Q9P0L2 795 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 ANXA2P2A6NMY6 339 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 CNTN5O94779 1100 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 ANXA2P07355 339 aaKnown RBP6.47□□□□□ -1.37
VPS13B-202ENST00000357162 CHRM1P11229 460 aaPredicted RBP6.47□□□□□ -1.37
VPS13B-202ENST00000357162 CD36P16671 472 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 TAS2R41P59536 307 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 DCDC1P59894 354 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 DDX39BQ13838 428 aaKnown RBP6.47□□□□□ -1.37
VPS13B-202ENST00000357162 DOK7Q18PE1 504 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 SPARTQ8N0X7 666 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 CPT1BQ92523 772 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 RIMKLBQ9ULI2 386 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 RIMS1Q86UR5 1692 aaKnown RBP6.47□□□□□ -1.37
VPS13B-202ENST00000357162 RCCD1A6NED2 376 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 ATG13O75143 517 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 MBL2P11226 248 aaPredicted RBP6.47□□□□□ -1.37
VPS13B-202ENST00000357162 RXRBP28702 533 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 HOXA10P31260 410 aaPredicted RBP6.47□□□□□ -1.37
VPS13B-202ENST00000357162 TAGLNQ01995 201 aaKnown RBP6.47□□□□□ -1.37
VPS13B-202ENST00000357162 SNAPC1Q16533 368 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 ATCAYQ86WG3 371 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 PHACTR4Q8IZ21 702 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 KCTD12Q96CX2 325 aaKnown RBP6.47□□□□□ -1.37
VPS13B-202ENST00000357162 TMEM169Q96HH4 297 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 CSPG4P5Q96PW8 444 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 GAD1Q99259 594 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 PLD2O14939 933 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 TLL1O43897 1013 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms