RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 XKR5Q6UX68 686 aa19.2■□□□□ 0.66
COL13A1-201ENST00000354547 RIMKLAQ8IXN7 391 aa19.2■□□□□ 0.66
COL13A1-201ENST00000354547 SLC22A15Q8IZD6 547 aa19.2■□□□□ 0.66
COL13A1-201ENST00000354547 DPP10Q8N608 796 aa19.2■□□□□ 0.66
COL13A1-201ENST00000354547 RNF217Q8TC41 542 aa19.2■□□□□ 0.66
COL13A1-201ENST00000354547 MIPOL1Q8TD10 442 aa19.2■□□□□ 0.66
COL13A1-201ENST00000354547 FAM162AQ96A26 154 aa19.2■□□□□ 0.66
COL13A1-201ENST00000354547 IL26Q9NPH9 171 aa19.2■□□□□ 0.66
COL13A1-201ENST00000354547 EXD2Q9NVH0 621 aa19.2■□□□□ 0.66
COL13A1-201ENST00000354547 EIF3LQ9Y262 564 aaKnown RBP19.2■□□□□ 0.66
COL13A1-201ENST00000354547 H0Y858 1186 aa19.19■□□□□ 0.66
COL13A1-201ENST00000354547 H3BMQ9 156 aa19.19■□□□□ 0.66
COL13A1-201ENST00000354547 CST1P01037 141 aa19.19■□□□□ 0.66
COL13A1-201ENST00000354547 RGS4P49798 205 aa19.19■□□□□ 0.66
COL13A1-201ENST00000354547 ADARB1P78563 741 aaKnown RBP19.19■□□□□ 0.66
COL13A1-201ENST00000354547 CHST9Q7L1S5 443 aa19.19■□□□□ 0.66
COL13A1-201ENST00000354547 ARL14EPQ8N8R7 260 aaPredicted RBP19.19■□□□□ 0.66
COL13A1-201ENST00000354547 GFM2Q969S9 779 aaKnown RBP19.19■□□□□ 0.66
COL13A1-201ENST00000354547 COG8Q96MW5 612 aa19.19■□□□□ 0.66
COL13A1-201ENST00000354547 FANCEQ9HB96 536 aa19.19■□□□□ 0.66
COL13A1-201ENST00000354547 ARVCFO00192 962 aa19.19■□□□□ 0.66
COL13A1-201ENST00000354547 UPK1AO00322 258 aa19.19■□□□□ 0.66
COL13A1-201ENST00000354547 TFPTP0C1Z6 253 aa19.19■□□□□ 0.66
COL13A1-201ENST00000354547 RAP2AP10114 183 aa19.19■□□□□ 0.66
COL13A1-201ENST00000354547 MTA1Q13330 715 aa19.19■□□□□ 0.66
COL13A1-201ENST00000354547 CHRNA6Q15825 494 aa19.19■□□□□ 0.66
COL13A1-201ENST00000354547 LRRC73Q5JTD7 316 aa19.19■□□□□ 0.66
COL13A1-201ENST00000354547 TSPAN33Q86UF1 283 aa19.19■□□□□ 0.66
COL13A1-201ENST00000354547 NPAS4Q8IUM7 802 aa19.19■□□□□ 0.66
COL13A1-201ENST00000354547 SLC6A13Q9NSD5 602 aa19.19■□□□□ 0.66
COL13A1-201ENST00000354547 GGT1P19440 569 aa19.19■□□□□ 0.66
COL13A1-201ENST00000354547 NR4A1P22736 598 aa19.19■□□□□ 0.66
COL13A1-201ENST00000354547 AKT1P31749 480 aa19.19■□□□□ 0.66
COL13A1-201ENST00000354547 CCL23P55773 120 aa19.19■□□□□ 0.66
COL13A1-201ENST00000354547 NUP107P57740 925 aa19.19■□□□□ 0.66
COL13A1-201ENST00000354547 SMARCB1Q12824 385 aa19.19■□□□□ 0.66
COL13A1-201ENST00000354547 NFATC2Q13469 925 aa19.19■□□□□ 0.66
COL13A1-201ENST00000354547 CRY1Q16526 586 aa19.19■□□□□ 0.66
COL13A1-201ENST00000354547 ANKDD1AQ495B1 522 aa19.19■□□□□ 0.66
COL13A1-201ENST00000354547 SPATS1Q496A3 300 aa19.19■□□□□ 0.66
COL13A1-201ENST00000354547 SPOUT1Q5T280 376 aaKnown RBP19.19■□□□□ 0.66
COL13A1-201ENST00000354547 SPESP1Q6UW49 350 aa19.19■□□□□ 0.66
COL13A1-201ENST00000354547 TPGS1Q6ZTW0 290 aa19.19■□□□□ 0.66
COL13A1-201ENST00000354547 DEFB128Q7Z7B8 93 aa19.19■□□□□ 0.66
COL13A1-201ENST00000354547 ZDHHC13Q8IUH4 622 aa19.19■□□□□ 0.66
COL13A1-201ENST00000354547 RGL4Q8IZJ4 473 aa19.19■□□□□ 0.66
COL13A1-201ENST00000354547 BPIFB6Q8NFQ5 453 aa19.19■□□□□ 0.66
COL13A1-201ENST00000354547 PIH1D2Q8WWB5 315 aa19.19■□□□□ 0.66
COL13A1-201ENST00000354547 AUTS2Q8WXX7 1259 aa19.19■□□□□ 0.66
COL13A1-201ENST00000354547 TOR3AQ9H497 397 aa19.19■□□□□ 0.66
COL13A1-201ENST00000354547 FAM8A1Q9UBU6 413 aa19.19■□□□□ 0.66
COL13A1-201ENST00000354547 G3V2T6 193 aa19.18■□□□□ 0.66
COL13A1-201ENST00000354547 H7C0S8 307 aa19.18■□□□□ 0.66
COL13A1-201ENST00000354547 PRKD3O94806 890 aa19.18■□□□□ 0.66
COL13A1-201ENST00000354547 PGLSO95336 258 aa19.18■□□□□ 0.66
COL13A1-201ENST00000354547 THRBP10828 461 aa19.18■□□□□ 0.66
COL13A1-201ENST00000354547 NEK2P51955 445 aa19.18■□□□□ 0.66
COL13A1-201ENST00000354547 CYP4F3Q08477 520 aa19.18■□□□□ 0.66
COL13A1-201ENST00000354547 DAG1Q14118 895 aa19.18■□□□□ 0.66
COL13A1-201ENST00000354547 CCNYL2Q5T2Q4 361 aa19.18■□□□□ 0.66
COL13A1-201ENST00000354547 TXNDC8Q6A555 127 aa19.18■□□□□ 0.66
COL13A1-201ENST00000354547 FAM117BQ6P1L5 589 aa19.18■□□□□ 0.66
COL13A1-201ENST00000354547 GTF2H4Q92759 462 aa19.18■□□□□ 0.66
COL13A1-201ENST00000354547 OR52E6Q96RD3 313 aa19.18■□□□□ 0.66
COL13A1-201ENST00000354547 KLF16Q9BXK1 252 aaPredicted RBP19.18■□□□□ 0.66
COL13A1-201ENST00000354547 HIPK3Q9H422 1215 aa19.18■□□□□ 0.66
COL13A1-201ENST00000354547 PRM3Q9NNZ6 103 aa19.18■□□□□ 0.66
COL13A1-201ENST00000354547 INVSQ9Y283 1065 aa19.18■□□□□ 0.66
COL13A1-201ENST00000354547 PCDHB1Q9Y5F3 818 aa19.18■□□□□ 0.66
COL13A1-201ENST00000354547 GAPDHSO14556 408 aaPredicted RBP19.18■□□□□ 0.66
COL13A1-201ENST00000354547 RGS14O43566 566 aa19.18■□□□□ 0.66
COL13A1-201ENST00000354547 LRATO95237 230 aa19.18■□□□□ 0.66
COL13A1-201ENST00000354547 HNF1BP35680 557 aa19.18■□□□□ 0.66
COL13A1-201ENST00000354547 ALDH3A2P51648 485 aa19.18■□□□□ 0.66
COL13A1-201ENST00000354547 NAA20P61599 178 aa19.18■□□□□ 0.66
COL13A1-201ENST00000354547 ZXDBP98169 803 aa19.18■□□□□ 0.66
COL13A1-201ENST00000354547 BNIP3Q12983 259 aa19.18■□□□□ 0.66
COL13A1-201ENST00000354547 SUSD1Q6UWL2 747 aa19.18■□□□□ 0.66
COL13A1-201ENST00000354547 ALDH16A1Q8IZ83 802 aa19.18■□□□□ 0.66
COL13A1-201ENST00000354547 SDCCAG3Q96C92 435 aa19.18■□□□□ 0.66
COL13A1-201ENST00000354547 PPP3R2Q96LZ3 170 aa19.18■□□□□ 0.66
COL13A1-201ENST00000354547 CLSTN3Q9BQT9 956 aa19.18■□□□□ 0.66
COL13A1-201ENST00000354547 OSBPL6Q9BZF3 934 aa19.18■□□□□ 0.66
COL13A1-201ENST00000354547 PAIP1Q9H074 479 aaKnown RBP19.18■□□□□ 0.66
COL13A1-201ENST00000354547 GNPTGQ9UJJ9 305 aa19.18■□□□□ 0.66
COL13A1-201ENST00000354547 TDRKHQ9Y2W6 561 aaKnown RBP19.18■□□□□ 0.66
COL13A1-201ENST00000354547 ITGALP20701 1170 aa19.17■□□□□ 0.66
COL13A1-201ENST00000354547 DGKAP23743 735 aa19.17■□□□□ 0.66
COL13A1-201ENST00000354547 BCL2L1Q07817 233 aa19.17■□□□□ 0.66
COL13A1-201ENST00000354547 RBFAQ8N0V3 343 aa19.17■□□□□ 0.66
COL13A1-201ENST00000354547 ZBTB2Q8N680 514 aa19.17■□□□□ 0.66
COL13A1-201ENST00000354547 C2orf15Q8WU43 125 aaKnown RBP19.17■□□□□ 0.66
COL13A1-201ENST00000354547 VN1R3Q9BXE9 311 aa19.17■□□□□ 0.66
COL13A1-201ENST00000354547 IRAK4Q9NWZ3 460 aa19.17■□□□□ 0.66
COL13A1-201ENST00000354547 SLC25A37Q9NYZ2 338 aa19.17■□□□□ 0.66
COL13A1-201ENST00000354547 PCDH10Q9P2E7 1040 aa19.17■□□□□ 0.66
COL13A1-201ENST00000354547 NEUROG3Q9Y4Z2 214 aa19.17■□□□□ 0.66
COL13A1-201ENST00000354547 PRRG1O14668 218 aa19.17■□□□□ 0.66
COL13A1-201ENST00000354547 FZD6O60353 706 aa19.17■□□□□ 0.66
COL13A1-201ENST00000354547 ALPLP05186 524 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms