RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 ITGB6P18564 788 aa12.92□□□□□ -0.34
CLCC1-202ENST00000348264 ADRA1DP25100 572 aa12.92□□□□□ -0.34
CLCC1-202ENST00000348264 OAS2P29728 719 aaKnown RBP12.92□□□□□ -0.34
CLCC1-202ENST00000348264 DLSTP36957 453 aa12.92□□□□□ -0.34
CLCC1-202ENST00000348264 CD151P48509 253 aa12.92□□□□□ -0.34
CLCC1-202ENST00000348264 HSD11B2P80365 405 aa12.92□□□□□ -0.34
CLCC1-202ENST00000348264 GSTM4Q03013 218 aa12.92□□□□□ -0.34
CLCC1-202ENST00000348264 NFATC3Q12968 1075 aa12.92□□□□□ -0.34
CLCC1-202ENST00000348264 BOP1Q14137 746 aaKnown RBP12.92□□□□□ -0.34
CLCC1-202ENST00000348264 SEMA3AQ14563 771 aa12.92□□□□□ -0.34
CLCC1-202ENST00000348264 GPR19Q15760 415 aa12.92□□□□□ -0.34
CLCC1-202ENST00000348264 PWWP2BQ6NUJ5 590 aa12.92□□□□□ -0.34
CLCC1-202ENST00000348264 ARMC6Q6NXE6 501 aa12.92□□□□□ -0.34
CLCC1-202ENST00000348264 BORAQ6PGQ7 559 aa12.92□□□□□ -0.34
CLCC1-202ENST00000348264 NAPRTQ6XQN6 538 aa12.92□□□□□ -0.34
CLCC1-202ENST00000348264 TRIM58Q8NG06 486 aa12.92□□□□□ -0.34
CLCC1-202ENST00000348264 OR52E1Q8NGJ3 308 aa12.92□□□□□ -0.34
CLCC1-202ENST00000348264 LCN9Q8WX39 176 aa12.92□□□□□ -0.34
CLCC1-202ENST00000348264 ELMO1Q92556 727 aa12.92□□□□□ -0.34
CLCC1-202ENST00000348264 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.92□□□□□ -0.34
CLCC1-202ENST00000348264 EFHD1Q9BUP0 239 aa12.92□□□□□ -0.34
CLCC1-202ENST00000348264 SRMSQ9H3Y6 488 aa12.92□□□□□ -0.34
CLCC1-202ENST00000348264 MVB12BQ9H7P6 319 aa12.92□□□□□ -0.34
CLCC1-202ENST00000348264 FGF21Q9NSA1 209 aa12.92□□□□□ -0.34
CLCC1-202ENST00000348264 STARD5Q9NSY2 213 aa12.92□□□□□ -0.34
CLCC1-202ENST00000348264 BTRCQ9Y297 605 aa12.92□□□□□ -0.34
CLCC1-202ENST00000348264 PPP2R2CQ9Y2T4 447 aa12.92□□□□□ -0.34
CLCC1-202ENST00000348264 MYO18BQ8IUG5 2567 aa12.91□□□□□ -0.34
CLCC1-202ENST00000348264 GSAPA4D1B5 854 aa12.91□□□□□ -0.34
CLCC1-202ENST00000348264 QSOX1O00391 747 aa12.91□□□□□ -0.34
CLCC1-202ENST00000348264 LIN7AO14910 233 aaPredicted RBP12.91□□□□□ -0.34
CLCC1-202ENST00000348264 CEP104O60308 925 aa12.91□□□□□ -0.34
CLCC1-202ENST00000348264 CXCR5P32302 372 aa12.91□□□□□ -0.34
CLCC1-202ENST00000348264 KCNJ1P48048 391 aa12.91□□□□□ -0.34
CLCC1-202ENST00000348264 ARL4DP49703 201 aa12.91□□□□□ -0.34
CLCC1-202ENST00000348264 POLE2P56282 527 aa12.91□□□□□ -0.34
CLCC1-202ENST00000348264 TUBB4BP68371 445 aa12.91□□□□□ -0.34
CLCC1-202ENST00000348264 CRADDP78560 199 aa12.91□□□□□ -0.34
CLCC1-202ENST00000348264 BASP1P80723 227 aaKnown RBP12.91□□□□□ -0.34
CLCC1-202ENST00000348264 ACY1Q03154 408 aa12.91□□□□□ -0.34
CLCC1-202ENST00000348264 PRKAA1Q13131 559 aa12.91□□□□□ -0.34
CLCC1-202ENST00000348264 PRKG2Q13237 762 aa12.91□□□□□ -0.34
CLCC1-202ENST00000348264 TUBB2AQ13885 445 aa12.91□□□□□ -0.34
CLCC1-202ENST00000348264 BRD3Q15059 726 aa12.91□□□□□ -0.34
CLCC1-202ENST00000348264 CYB5D1Q6P9G0 228 aa12.91□□□□□ -0.34
CLCC1-202ENST00000348264 CARFQ8N187 725 aa12.91□□□□□ -0.34
CLCC1-202ENST00000348264 OR5AR1Q8NGP9 310 aa12.91□□□□□ -0.34
CLCC1-202ENST00000348264 OR6P1Q8NGX9 317 aa12.91□□□□□ -0.34
CLCC1-202ENST00000348264 LKAAEAR1Q8TD35 194 aa12.91□□□□□ -0.34
CLCC1-202ENST00000348264 TFGQ92734 400 aaPredicted RBP12.91□□□□□ -0.34
CLCC1-202ENST00000348264 TUBB2BQ9BVA1 445 aa12.91□□□□□ -0.34
CLCC1-202ENST00000348264 TFB2MQ9H5Q4 396 aaKnown RBP12.91□□□□□ -0.34
CLCC1-202ENST00000348264 XKR8Q9H6D3 395 aa12.91□□□□□ -0.34
CLCC1-202ENST00000348264 EIF2B3Q9NR50 452 aaKnown RBP12.91□□□□□ -0.34
CLCC1-202ENST00000348264 SOHLH2Q9NX45 425 aa12.91□□□□□ -0.34
CLCC1-202ENST00000348264 DRG1Q9Y295 367 aaKnown RBP12.91□□□□□ -0.34
CLCC1-202ENST00000348264 ZKSCAN5Q9Y2L8 839 aa12.91□□□□□ -0.34
CLCC1-202ENST00000348264 MED13Q9UHV7 2174 aa12.91□□□□□ -0.34
CLCC1-202ENST00000348264 SLC5A10A0PJK1 596 aa12.9□□□□□ -0.34
CLCC1-202ENST00000348264 SLC9B1P1A6NJY1 282 aa12.9□□□□□ -0.34
CLCC1-202ENST00000348264 FTH1P02794 183 aa12.9□□□□□ -0.34
CLCC1-202ENST00000348264 NTRK1P04629 796 aa12.9□□□□□ -0.34
CLCC1-202ENST00000348264 CDH3P22223 829 aa12.9□□□□□ -0.34
CLCC1-202ENST00000348264 ACADLP28330 430 aa12.9□□□□□ -0.34
CLCC1-202ENST00000348264 SESN2P58004 480 aaPredicted RBP12.9□□□□□ -0.34
CLCC1-202ENST00000348264 PRAMEP78395 509 aa12.9□□□□□ -0.34
CLCC1-202ENST00000348264 NFKB2Q00653 900 aa12.9□□□□□ -0.34
CLCC1-202ENST00000348264 LAMB3Q13751 1172 aa12.9□□□□□ -0.34
CLCC1-202ENST00000348264 SYTL3Q4VX76 610 aa12.9□□□□□ -0.34
CLCC1-202ENST00000348264 C16orf46Q6P387 395 aa12.9□□□□□ -0.34
CLCC1-202ENST00000348264 ZNF449Q6P9G9 518 aa12.9□□□□□ -0.34
CLCC1-202ENST00000348264 NLRP9Q7RTR0 991 aa12.9□□□□□ -0.34
CLCC1-202ENST00000348264 LDB1Q86U70 411 aaPredicted RBP12.9□□□□□ -0.34
CLCC1-202ENST00000348264 ADGRF3Q8IZF5 1079 aa12.9□□□□□ -0.34
CLCC1-202ENST00000348264 PPHLN1Q8NEY8 458 aaKnown RBP12.9□□□□□ -0.34
CLCC1-202ENST00000348264 OR4L1Q8NH43 312 aa12.9□□□□□ -0.34
CLCC1-202ENST00000348264 CT55Q8WUE5 264 aa12.9□□□□□ -0.34
CLCC1-202ENST00000348264 ZNF501Q96CX3 271 aaPredicted RBP12.9□□□□□ -0.34
CLCC1-202ENST00000348264 CATSPER2Q96P56 530 aa12.9□□□□□ -0.34
CLCC1-202ENST00000348264 RUFY1Q96T51 708 aa12.9□□□□□ -0.34
CLCC1-202ENST00000348264 PITPNM3Q9BZ71 974 aa12.9□□□□□ -0.34
CLCC1-202ENST00000348264 AKIRIN1Q9H9L7 192 aaPredicted RBP12.9□□□□□ -0.34
CLCC1-202ENST00000348264 LHX9Q9NQ69 397 aa12.9□□□□□ -0.34
CLCC1-202ENST00000348264 CHRAC1Q9NRG0 131 aa12.9□□□□□ -0.34
CLCC1-202ENST00000348264 GEMIN8Q9NWZ8 242 aaKnown RBP12.9□□□□□ -0.34
CLCC1-202ENST00000348264 MARCH4Q9P2E8 410 aaPredicted RBP12.9□□□□□ -0.34
CLCC1-202ENST00000348264 ICKQ9UPZ9 632 aa12.9□□□□□ -0.34
CLCC1-202ENST00000348264 BHMG1C9JSJ3 638 aaPredicted RBP12.89□□□□□ -0.35
CLCC1-202ENST00000348264 PYCARD-AS1I3L0S3 204 aa12.89□□□□□ -0.35
CLCC1-202ENST00000348264 MATN2O00339 956 aa12.89□□□□□ -0.35
CLCC1-202ENST00000348264 OR56A5P0C7T3 313 aa12.89□□□□□ -0.35
CLCC1-202ENST00000348264 PVRP15151 417 aa12.89□□□□□ -0.35
CLCC1-202ENST00000348264 ST6GAL1P15907 406 aa12.89□□□□□ -0.35
CLCC1-202ENST00000348264 TCN2P20062 427 aa12.89□□□□□ -0.35
CLCC1-202ENST00000348264 PRDX3P30048 256 aaKnown RBP12.89□□□□□ -0.35
CLCC1-202ENST00000348264 CCR10P46092 362 aa12.89□□□□□ -0.35
CLCC1-202ENST00000348264 CSE1LP55060 971 aaKnown RBP12.89□□□□□ -0.35
CLCC1-202ENST00000348264 MC1RQ01726 317 aa12.89□□□□□ -0.35
CLCC1-202ENST00000348264 DNASE1L3Q13609 305 aa12.89□□□□□ -0.35
CLCC1-202ENST00000348264 DEFB109BQ30KR1 87 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms