RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 SPAM1P38567 509 aa16.33■□□□□ 0.2
TRA2B-202ENST00000342294 SSR1P43307 286 aaKnown RBP16.33■□□□□ 0.2
TRA2B-202ENST00000342294 GABRA4P48169 554 aa16.33■□□□□ 0.2
TRA2B-202ENST00000342294 DCDP81605 110 aaKnown RBP16.33■□□□□ 0.2
TRA2B-202ENST00000342294 OTUD4Q01804 1114 aaKnown RBP16.33■□□□□ 0.2
TRA2B-202ENST00000342294 MYL5Q02045 173 aa16.33■□□□□ 0.2
TRA2B-202ENST00000342294 CDC16Q13042 620 aa16.33■□□□□ 0.2
TRA2B-202ENST00000342294 CYP2A13Q16696 494 aa16.33■□□□□ 0.2
TRA2B-202ENST00000342294 LONRF2Q1L5Z9 754 aa16.33■□□□□ 0.2
TRA2B-202ENST00000342294 C1orf189Q5VU69 101 aa16.33■□□□□ 0.2
TRA2B-202ENST00000342294 ZNF324BQ6AW86 544 aaPredicted RBP16.33■□□□□ 0.2
TRA2B-202ENST00000342294 FCRL6Q6DN72 434 aa16.33■□□□□ 0.2
TRA2B-202ENST00000342294 CCDC70Q6NSX1 233 aa16.33■□□□□ 0.2
TRA2B-202ENST00000342294 FAM151BQ6UXP7 276 aa16.33■□□□□ 0.2
TRA2B-202ENST00000342294 GPR135Q8IZ08 494 aa16.33■□□□□ 0.2
TRA2B-202ENST00000342294 PLD5Q8N7P1 536 aa16.33■□□□□ 0.2
TRA2B-202ENST00000342294 PROKR1Q8TCW9 393 aa16.33■□□□□ 0.2
TRA2B-202ENST00000342294 LCN9Q8WX39 176 aa16.33■□□□□ 0.2
TRA2B-202ENST00000342294 NACC2Q96BF6 587 aa16.33■□□□□ 0.2
TRA2B-202ENST00000342294 TRIM8Q9BZR9 551 aa16.33■□□□□ 0.2
TRA2B-202ENST00000342294 FAM60AQ9NP50 221 aa16.33■□□□□ 0.2
TRA2B-202ENST00000342294 IFT80Q9P2H3 777 aaPredicted RBP16.33■□□□□ 0.2
TRA2B-202ENST00000342294 CDYLQ9Y232 598 aa16.33■□□□□ 0.2
TRA2B-202ENST00000342294 MED13LQ71F56 2210 aa16.33■□□□□ 0.2
TRA2B-202ENST00000342294 GLYATL1P3A0A0U1RQE8 302 aa16.32■□□□□ 0.2
TRA2B-202ENST00000342294 CCDC66A2RUB6 948 aa16.32■□□□□ 0.2
TRA2B-202ENST00000342294 MYO1FO00160 1098 aa16.32■□□□□ 0.2
TRA2B-202ENST00000342294 MAP3K7O43318 606 aa16.32■□□□□ 0.2
TRA2B-202ENST00000342294 HCRTR1O43613 425 aa16.32■□□□□ 0.2
TRA2B-202ENST00000342294 SGTAO43765 313 aa16.32■□□□□ 0.2
TRA2B-202ENST00000342294 JRKO75564 520 aa16.32■□□□□ 0.2
TRA2B-202ENST00000342294 CDK11BP21127 795 aaKnown RBP16.32■□□□□ 0.2
TRA2B-202ENST00000342294 GJC1P36383 396 aa16.32■□□□□ 0.2
TRA2B-202ENST00000342294 NOMO1Q15155 1222 aa16.32■□□□□ 0.2
TRA2B-202ENST00000342294 PPP2R5EQ16537 467 aa16.32■□□□□ 0.2
TRA2B-202ENST00000342294 PRAMEF13Q5VWM6 474 aa16.32■□□□□ 0.2
TRA2B-202ENST00000342294 RPUSD3Q6P087 351 aaKnown RBP16.32■□□□□ 0.2
TRA2B-202ENST00000342294 MAP7D3Q8IWC1 876 aa16.32■□□□□ 0.2
TRA2B-202ENST00000342294 LILRA3Q8N6C8 439 aaPredicted RBP16.32■□□□□ 0.2
TRA2B-202ENST00000342294 LINC00615Q96LM1 132 aaPredicted RBP16.32■□□□□ 0.2
TRA2B-202ENST00000342294 ZNF830Q96NB3 372 aaPredicted RBP16.32■□□□□ 0.2
TRA2B-202ENST00000342294 RNF157Q96PX1 679 aa16.32■□□□□ 0.2
TRA2B-202ENST00000342294 AP1M1Q9BXS5 423 aa16.32■□□□□ 0.2
TRA2B-202ENST00000342294 SPRTNQ9H040 489 aaPredicted RBP16.32■□□□□ 0.2
TRA2B-202ENST00000342294 GLOD4Q9HC38 313 aa16.32■□□□□ 0.2
TRA2B-202ENST00000342294 SLC6A20Q9NP91 592 aa16.32■□□□□ 0.2
TRA2B-202ENST00000342294 NDOR1Q9UHB4 597 aa16.32■□□□□ 0.2
TRA2B-202ENST00000342294 FBXL4Q9UKA2 621 aa16.32■□□□□ 0.2
TRA2B-202ENST00000342294 ITGB1BP2Q9UKP3 347 aa16.32■□□□□ 0.2
TRA2B-202ENST00000342294 HEBP2Q9Y5Z4 205 aa16.32■□□□□ 0.2
TRA2B-202ENST00000342294 PCM1Q15154 2024 aa16.31■□□□□ 0.2
TRA2B-202ENST00000342294 AKAP9Q99996 3911 aa16.31■□□□□ 0.2
TRA2B-202ENST00000342294 LOC285095A0A1B0GVY8 99 aa16.31■□□□□ 0.2
TRA2B-202ENST00000342294 CCDC78A2IDD5 438 aa16.31■□□□□ 0.2
TRA2B-202ENST00000342294 PMPCBO75439 489 aa16.31■□□□□ 0.2
TRA2B-202ENST00000342294 OR2B3O76000 313 aa16.31■□□□□ 0.2
TRA2B-202ENST00000342294 POLBP06746 335 aa16.31■□□□□ 0.2
TRA2B-202ENST00000342294 PYGMP11217 842 aa16.31■□□□□ 0.2
TRA2B-202ENST00000342294 TDGF1P3P51864 188 aa16.31■□□□□ 0.2
TRA2B-202ENST00000342294 TAS2R40P59535 323 aa16.31■□□□□ 0.2
TRA2B-202ENST00000342294 ITGA9Q13797 1035 aa16.31■□□□□ 0.2
TRA2B-202ENST00000342294 KRT33BQ14525 404 aa16.31■□□□□ 0.2
TRA2B-202ENST00000342294 GSE1Q14687 1217 aa16.31■□□□□ 0.2
TRA2B-202ENST00000342294 TLR1Q15399 786 aa16.31■□□□□ 0.2
TRA2B-202ENST00000342294 ZNF630Q2M218 657 aaPredicted RBP16.31■□□□□ 0.2
TRA2B-202ENST00000342294 NKAIN1Q4KMZ8 207 aa16.31■□□□□ 0.2
TRA2B-202ENST00000342294 BCL7AQ4VC05 210 aa16.31■□□□□ 0.2
TRA2B-202ENST00000342294 ZFYVE27Q5T4F4 411 aa16.31■□□□□ 0.2
TRA2B-202ENST00000342294 AGAP7PQ5VUJ5 663 aa16.31■□□□□ 0.2
TRA2B-202ENST00000342294 SPNS3Q6ZMD2 512 aa16.31■□□□□ 0.2
TRA2B-202ENST00000342294 BNC2Q6ZN30 1099 aaPredicted RBP16.31■□□□□ 0.2
TRA2B-202ENST00000342294 DET1Q7L5Y6 550 aa16.31■□□□□ 0.2
TRA2B-202ENST00000342294 PARP9Q8IXQ6 854 aa16.31■□□□□ 0.2
TRA2B-202ENST00000342294 ADGRF3Q8IZF5 1079 aa16.31■□□□□ 0.2
TRA2B-202ENST00000342294 ZNF295-AS1Q8N0V1 137 aa16.31■□□□□ 0.2
TRA2B-202ENST00000342294 NAT14Q8WUY8 206 aa16.31■□□□□ 0.2
TRA2B-202ENST00000342294 AGAP4Q96P64 663 aa16.31■□□□□ 0.2
TRA2B-202ENST00000342294 TRIM56Q9BRZ2 755 aaKnown RBP16.31■□□□□ 0.2
TRA2B-202ENST00000342294 CCM2Q9BSQ5 444 aa16.31■□□□□ 0.2
TRA2B-202ENST00000342294 TFB2MQ9H5Q4 396 aaKnown RBP16.31■□□□□ 0.2
TRA2B-202ENST00000342294 CHST11Q9NPF2 352 aa16.31■□□□□ 0.2
TRA2B-202ENST00000342294 SLC22A11Q9NSA0 550 aa16.31■□□□□ 0.2
TRA2B-202ENST00000342294 OLAHQ9NV23 265 aa16.31■□□□□ 0.2
TRA2B-202ENST00000342294 DHCR7Q9UBM7 475 aaKnown RBP16.31■□□□□ 0.2
TRA2B-202ENST00000342294 MYO7BQ6PIF6 2116 aa16.31■□□□□ 0.2
TRA2B-202ENST00000342294 CCDC88CQ9P219 2028 aa16.31■□□□□ 0.2
TRA2B-202ENST00000342294 TACC2O95359 2948 aa16.31■□□□□ 0.2
TRA2B-202ENST00000342294 DCHS2Q6V1P9 2916 aa16.3■□□□□ 0.2
TRA2B-202ENST00000342294 PCDH17O14917 1159 aa16.3■□□□□ 0.2
TRA2B-202ENST00000342294 ALOX12BO75342 701 aa16.3■□□□□ 0.2
TRA2B-202ENST00000342294 CTSBP07858 339 aa16.3■□□□□ 0.2
TRA2B-202ENST00000342294 MSH3P20585 1137 aa16.3■□□□□ 0.2
TRA2B-202ENST00000342294 MMP11P24347 488 aa16.3■□□□□ 0.2
TRA2B-202ENST00000342294 HTR1EP28566 365 aa16.3■□□□□ 0.2
TRA2B-202ENST00000342294 AP1B1Q10567 949 aa16.3■□□□□ 0.2
TRA2B-202ENST00000342294 SLC9A5Q14940 896 aa16.3■□□□□ 0.2
TRA2B-202ENST00000342294 ZIC1Q15915 447 aa16.3■□□□□ 0.2
TRA2B-202ENST00000342294 KDELC1Q6UW63 502 aa16.3■□□□□ 0.2
TRA2B-202ENST00000342294 FAM180AQ6UWF9 173 aa16.3■□□□□ 0.2
TRA2B-202ENST00000342294 RBM43Q6ZSC3 357 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms