RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 TYSND1Q2T9J0 566 aa14.2□□□□□ -0.14
SNX20-202ENST00000330943 TIGD5Q53EQ6 642 aa14.2□□□□□ -0.14
SNX20-202ENST00000330943 VARS2Q5ST30 1063 aaKnown RBP14.2□□□□□ -0.14
SNX20-202ENST00000330943 LAIR1Q6GTX8 287 aa14.2□□□□□ -0.14
SNX20-202ENST00000330943 MSANTD2Q6P1R3 559 aa14.2□□□□□ -0.14
SNX20-202ENST00000330943 LRRC8DQ7L1W4 858 aa14.2□□□□□ -0.14
SNX20-202ENST00000330943 GPSM1Q86YR5 675 aa14.2□□□□□ -0.14
SNX20-202ENST00000330943 LYSMD2Q8IV50 215 aa14.2□□□□□ -0.14
SNX20-202ENST00000330943 CLIP4Q8N3C7 705 aa14.2□□□□□ -0.14
SNX20-202ENST00000330943 POC5Q8NA72 575 aa14.2□□□□□ -0.14
SNX20-202ENST00000330943 LGALS12Q96DT0 336 aa14.2□□□□□ -0.14
SNX20-202ENST00000330943 REXO5Q96IC2 774 aaKnown RBP14.2□□□□□ -0.14
SNX20-202ENST00000330943 CPNE5Q9HCH3 593 aa14.2□□□□□ -0.14
SNX20-202ENST00000330943 TMEM98Q9Y2Y6 226 aa14.2□□□□□ -0.14
SNX20-202ENST00000330943 TPRKBQ9Y3C4 175 aa14.2□□□□□ -0.14
SNX20-202ENST00000330943 TTC3P53804 2025 aa14.19□□□□□ -0.14
SNX20-202ENST00000330943 SNPHO15079 494 aa14.19□□□□□ -0.14
SNX20-202ENST00000330943 TREHO43280 583 aa14.19□□□□□ -0.14
SNX20-202ENST00000330943 TBX1O43435 398 aa14.19□□□□□ -0.14
SNX20-202ENST00000330943 UPK1BO75841 260 aa14.19□□□□□ -0.14
SNX20-202ENST00000330943 CNPP09543 421 aaKnown RBP14.19□□□□□ -0.14
SNX20-202ENST00000330943 MSH3P20585 1137 aa14.19□□□□□ -0.14
SNX20-202ENST00000330943 IL18R1Q13478 541 aa14.19□□□□□ -0.14
SNX20-202ENST00000330943 PON2Q15165 354 aa14.19□□□□□ -0.14
SNX20-202ENST00000330943 PTPRNQ16849 979 aa14.19□□□□□ -0.14
SNX20-202ENST00000330943 GCNT7Q6ZNI0 430 aa14.19□□□□□ -0.14
SNX20-202ENST00000330943 PHACTR4Q8IZ21 702 aa14.19□□□□□ -0.14
SNX20-202ENST00000330943 SIDT2Q8NBJ9 832 aaKnown RBP14.19□□□□□ -0.14
SNX20-202ENST00000330943 ZNF540Q8NDQ6 660 aa14.19□□□□□ -0.14
SNX20-202ENST00000330943 LPPQ93052 612 aa14.19□□□□□ -0.14
SNX20-202ENST00000330943 ZHX1-C8orf76Q96EF9 292 aa14.19□□□□□ -0.14
SNX20-202ENST00000330943 CDKN2AIPNLQ96HQ2 116 aa14.19□□□□□ -0.14
SNX20-202ENST00000330943 ZNF382Q96SR6 550 aa14.19□□□□□ -0.14
SNX20-202ENST00000330943 SP140LQ9H930 580 aa14.19□□□□□ -0.14
SNX20-202ENST00000330943 TMEM45AQ9NWC5 275 aa14.19□□□□□ -0.14
SNX20-202ENST00000330943 SCN3BQ9NY72 215 aa14.19□□□□□ -0.14
SNX20-202ENST00000330943 NOX1Q9Y5S8 564 aa14.19□□□□□ -0.14
SNX20-202ENST00000330943 PLXNB2O15031 1838 aa14.19□□□□□ -0.14
SNX20-202ENST00000330943 M0QX08 132 aa14.19□□□□□ -0.14
SNX20-202ENST00000330943 FGF1P05230 155 aa14.19□□□□□ -0.14
SNX20-202ENST00000330943 GSNP06396 782 aa14.19□□□□□ -0.14
SNX20-202ENST00000330943 THP07101 528 aa14.19□□□□□ -0.14
SNX20-202ENST00000330943 MAGP20916 626 aa14.19□□□□□ -0.14
SNX20-202ENST00000330943 RPL38P63173 70 aaKnown RBP14.19□□□□□ -0.14
SNX20-202ENST00000330943 SMN1Q16637 294 aaKnown RBP14.19□□□□□ -0.14
SNX20-202ENST00000330943 RFX4Q33E94 735 aa14.19□□□□□ -0.14
SNX20-202ENST00000330943 FAM174BQ3ZCQ3 159 aa14.19□□□□□ -0.14
SNX20-202ENST00000330943 DUSP28Q4G0W2 176 aa14.19□□□□□ -0.14
SNX20-202ENST00000330943 COLEC12Q5KU26 742 aa14.19□□□□□ -0.14
SNX20-202ENST00000330943 SYT6Q5T7P8 510 aaPredicted RBP14.19□□□□□ -0.14
SNX20-202ENST00000330943 SCD5Q86SK9 330 aa14.19□□□□□ -0.14
SNX20-202ENST00000330943 SETD9Q8NE22 299 aa14.19□□□□□ -0.14
SNX20-202ENST00000330943 BRSK1Q8TDC3 778 aa14.19□□□□□ -0.14
SNX20-202ENST00000330943 UPF1Q92900 1129 aaKnown RBP eCLIP14.19□□□□□ -0.14
SNX20-202ENST00000330943 NMUR1Q9HB89 426 aa14.19□□□□□ -0.14
SNX20-202ENST00000330943 MIOSQ9NXC5 875 aa14.19□□□□□ -0.14
SNX20-202ENST00000330943 CPA4Q9UI42 421 aa14.19□□□□□ -0.14
SNX20-202ENST00000330943 IFT52Q9Y366 437 aa14.19□□□□□ -0.14
SNX20-202ENST00000330943 COL4A4P53420 1690 aaPredicted RBP14.18□□□□□ -0.14
SNX20-202ENST00000330943 CCL15-CCL14A0A0B4J2E2 113 aa14.18□□□□□ -0.14
SNX20-202ENST00000330943 KLK8O60259 260 aa14.18□□□□□ -0.14
SNX20-202ENST00000330943 NUAK1O60285 661 aa14.18□□□□□ -0.14
SNX20-202ENST00000330943 NIPSNAP2O75323 286 aa14.18□□□□□ -0.14
SNX20-202ENST00000330943 SERPINA1P01009 418 aa14.18□□□□□ -0.14
SNX20-202ENST00000330943 NTRK1P04629 796 aa14.18□□□□□ -0.14
SNX20-202ENST00000330943 HLA-DPA1P20036 260 aa14.18□□□□□ -0.14
SNX20-202ENST00000330943 GGT5P36269 586 aa14.18□□□□□ -0.14
SNX20-202ENST00000330943 CDKN1CP49918 316 aaPredicted RBP14.18□□□□□ -0.14
SNX20-202ENST00000330943 CDC20Q12834 499 aa14.18□□□□□ -0.14
SNX20-202ENST00000330943 GPR162Q16538 588 aa14.18□□□□□ -0.14
SNX20-202ENST00000330943 MAPKAPK3Q16644 382 aa14.18□□□□□ -0.14
SNX20-202ENST00000330943 CCL15Q16663 113 aa14.18□□□□□ -0.14
SNX20-202ENST00000330943 C18orf21Q32NC0 220 aaPredicted RBP14.18□□□□□ -0.14
SNX20-202ENST00000330943 GTDC1Q4AE62 458 aa14.18□□□□□ -0.14
SNX20-202ENST00000330943 NEK10Q6ZWH5 1172 aa14.18□□□□□ -0.14
SNX20-202ENST00000330943 HIPK1Q86Z02 1210 aa14.18□□□□□ -0.14
SNX20-202ENST00000330943 NKAPQ8N5F7 415 aaKnown RBP14.18□□□□□ -0.14
SNX20-202ENST00000330943 HASPINQ8TF76 798 aa14.18□□□□□ -0.14
SNX20-202ENST00000330943 FBLIM1Q8WUP2 373 aa14.18□□□□□ -0.14
SNX20-202ENST00000330943 EEF1AKMT1Q8WVE0 214 aa14.18□□□□□ -0.14
SNX20-202ENST00000330943 GTF2H4Q92759 462 aa14.18□□□□□ -0.14
SNX20-202ENST00000330943 LINGO1Q96FE5 620 aa14.18□□□□□ -0.14
SNX20-202ENST00000330943 TXNDC15Q96J42 360 aa14.18□□□□□ -0.14
SNX20-202ENST00000330943 BARD1Q99728 777 aaKnown RBP14.18□□□□□ -0.14
SNX20-202ENST00000330943 ZYG11BQ9C0D3 744 aa14.18□□□□□ -0.14
SNX20-202ENST00000330943 DUSP21Q9H596 190 aa14.18□□□□□ -0.14
SNX20-202ENST00000330943 SARS2Q9NP81 518 aaKnown RBP14.18□□□□□ -0.14
SNX20-202ENST00000330943 VNN3Q9NY84 501 aa14.18□□□□□ -0.14
SNX20-202ENST00000330943 FNDC3AQ9Y2H6 1198 aaKnown RBP14.18□□□□□ -0.14
SNX20-202ENST00000330943 MBLAC1A4D2B0 266 aaPredicted RBP14.18□□□□□ -0.14
SNX20-202ENST00000330943 WASH4PA8MWX3 477 aa14.18□□□□□ -0.14
SNX20-202ENST00000330943 CXCL11O14625 94 aa14.18□□□□□ -0.14
SNX20-202ENST00000330943 ASNA1O43681 348 aa14.18□□□□□ -0.14
SNX20-202ENST00000330943 SCELO95171 688 aa14.18□□□□□ -0.14
SNX20-202ENST00000330943 ITGAMP11215 1152 aa14.18□□□□□ -0.14
SNX20-202ENST00000330943 HOXD8P13378 290 aaPredicted RBP14.18□□□□□ -0.14
SNX20-202ENST00000330943 SLC2A4P14672 509 aa14.18□□□□□ -0.14
SNX20-202ENST00000330943 AKT1P31749 480 aa14.18□□□□□ -0.14
SNX20-202ENST00000330943 ADAM17P78536 824 aa14.18□□□□□ -0.14
SNX20-202ENST00000330943 LRIT3Q3SXY7 679 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms