RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 PILRAQ9UKJ1 303 aa26.88■■□□□ 1.89
ATPAF1-201ENST00000329231 SDK2Q58EX2 2172 aa26.88■■□□□ 1.89
ATPAF1-201ENST00000329231 CACNA1GO43497 2377 aa26.87■■□□□ 1.89
ATPAF1-201ENST00000329231 IGHV5-51A0A0C4DH38 117 aa26.87■■□□□ 1.89
ATPAF1-201ENST00000329231 SLC5A10A0PJK1 596 aa26.87■■□□□ 1.89
ATPAF1-201ENST00000329231 MATN2O00339 956 aa26.87■■□□□ 1.89
ATPAF1-201ENST00000329231 PRMT5O14744 637 aaPredicted RBP26.87■■□□□ 1.89
ATPAF1-201ENST00000329231 RAD1O60671 282 aa26.87■■□□□ 1.89
ATPAF1-201ENST00000329231 MLNP12872 115 aa26.87■■□□□ 1.89
ATPAF1-201ENST00000329231 SRSF6Q13247 344 aaKnown RBP26.87■■□□□ 1.89
ATPAF1-201ENST00000329231 CACNA2D3Q8IZS8 1091 aa26.87■■□□□ 1.89
ATPAF1-201ENST00000329231 CARFQ8N187 725 aa26.87■■□□□ 1.89
ATPAF1-201ENST00000329231 OTUD6BQ8N6M0 293 aa26.87■■□□□ 1.89
ATPAF1-201ENST00000329231 ZSCAN1Q8NBB4 408 aa26.87■■□□□ 1.89
ATPAF1-201ENST00000329231 CARD6Q9BX69 1037 aa26.87■■□□□ 1.89
ATPAF1-201ENST00000329231 SPRY4Q9C004 299 aa26.87■■□□□ 1.89
ATPAF1-201ENST00000329231 SAMD15Q9P1V8 674 aa26.87■■□□□ 1.89
ATPAF1-201ENST00000329231 TMEM184BQ9Y519 407 aaPredicted RBP26.87■■□□□ 1.89
ATPAF1-201ENST00000329231 AVILO75366 819 aa26.86■■□□□ 1.89
ATPAF1-201ENST00000329231 NDUFS3O75489 264 aa26.86■■□□□ 1.89
ATPAF1-201ENST00000329231 STK17BO94768 372 aa26.86■■□□□ 1.89
ATPAF1-201ENST00000329231 TMEM63AO94886 807 aa26.86■■□□□ 1.89
ATPAF1-201ENST00000329231 VAPBO95292 243 aa26.86■■□□□ 1.89
ATPAF1-201ENST00000329231 POLR2CP19387 275 aaPredicted RBP26.86■■□□□ 1.89
ATPAF1-201ENST00000329231 ARL4DP49703 201 aa26.86■■□□□ 1.89
ATPAF1-201ENST00000329231 PAPD7Q5XG87 772 aaKnown RBP26.86■■□□□ 1.89
ATPAF1-201ENST00000329231 MRNIPQ6NTE8 343 aa26.86■■□□□ 1.89
ATPAF1-201ENST00000329231 CASC4Q6P4E1 433 aa26.86■■□□□ 1.89
ATPAF1-201ENST00000329231 CES3Q6UWW8 571 aa26.86■■□□□ 1.89
ATPAF1-201ENST00000329231 CAND1Q86VP6 1230 aaKnown RBP26.86■■□□□ 1.89
ATPAF1-201ENST00000329231 NLGN4XQ8N0W4 816 aa26.86■■□□□ 1.89
ATPAF1-201ENST00000329231 SIDT2Q8NBJ9 832 aaKnown RBP26.86■■□□□ 1.89
ATPAF1-201ENST00000329231 NLGN4YQ8NFZ3 816 aaPredicted RBP26.86■■□□□ 1.89
ATPAF1-201ENST00000329231 OR52E1Q8NGJ3 308 aa26.86■■□□□ 1.89
ATPAF1-201ENST00000329231 NAPGQ99747 312 aaPredicted RBP26.86■■□□□ 1.89
ATPAF1-201ENST00000329231 HGH1Q9BTY7 390 aa26.86■■□□□ 1.89
ATPAF1-201ENST00000329231 TRIT1Q9H3H1 467 aaKnown RBP26.86■■□□□ 1.89
ATPAF1-201ENST00000329231 ASF1AQ9Y294 204 aa26.86■■□□□ 1.89
ATPAF1-201ENST00000329231 MAGEB16A2A368 324 aa26.85■■□□□ 1.89
ATPAF1-201ENST00000329231 ERVH48-1M5A8F1 160 aa26.85■■□□□ 1.89
ATPAF1-201ENST00000329231 ITGB6P18564 788 aa26.85■■□□□ 1.89
ATPAF1-201ENST00000329231 PAMP19021 973 aa26.85■■□□□ 1.89
ATPAF1-201ENST00000329231 MAP4P27816 1152 aaKnown RBP26.85■■□□□ 1.89
ATPAF1-201ENST00000329231 ACADLP28330 430 aa26.85■■□□□ 1.89
ATPAF1-201ENST00000329231 PRKG2Q13237 762 aa26.85■■□□□ 1.89
ATPAF1-201ENST00000329231 NAPRTQ6XQN6 538 aa26.85■■□□□ 1.89
ATPAF1-201ENST00000329231 SDCCAG8Q86SQ7 713 aaPredicted RBP26.85■■□□□ 1.89
ATPAF1-201ENST00000329231 LRRC6Q86X45 466 aa26.85■■□□□ 1.89
ATPAF1-201ENST00000329231 LSM14AQ8ND56 463 aaKnown RBP26.85■■□□□ 1.89
ATPAF1-201ENST00000329231 ASZ1Q8WWH4 475 aa26.85■■□□□ 1.89
ATPAF1-201ENST00000329231 BBC3Q96PG8 261 aaPredicted RBP26.85■■□□□ 1.89
ATPAF1-201ENST00000329231 PDE7BQ9NP56 450 aa26.85■■□□□ 1.89
ATPAF1-201ENST00000329231 SDR42E2A6NKP2 422 aa26.84■■□□□ 1.89
ATPAF1-201ENST00000329231 BHMG1C9JSJ3 638 aaPredicted RBP26.84■■□□□ 1.89
ATPAF1-201ENST00000329231 PFDN6O15212 129 aa26.84■■□□□ 1.89
ATPAF1-201ENST00000329231 ATXN7O15265 892 aaPredicted RBP26.84■■□□□ 1.89
ATPAF1-201ENST00000329231 ARNTP27540 789 aa26.84■■□□□ 1.89
ATPAF1-201ENST00000329231 CCR7P32248 378 aa26.84■■□□□ 1.89
ATPAF1-201ENST00000329231 ARCN1P48444 511 aaKnown RBP26.84■■□□□ 1.89
ATPAF1-201ENST00000329231 KPNA2P52292 529 aaKnown RBP26.84■■□□□ 1.89
ATPAF1-201ENST00000329231 HSD11B2P80365 405 aa26.84■■□□□ 1.89
ATPAF1-201ENST00000329231 PPP1R7Q15435 360 aa26.84■■□□□ 1.89
ATPAF1-201ENST00000329231 PTRHD1Q6GMV3 140 aaKnown RBP26.84■■□□□ 1.89
ATPAF1-201ENST00000329231 KIAA0930Q6ICG6 404 aaPredicted RBP26.84■■□□□ 1.89
ATPAF1-201ENST00000329231 AMIGO1Q86WK6 493 aa26.84■■□□□ 1.89
ATPAF1-201ENST00000329231 RASGRP3Q8IV61 690 aa26.84■■□□□ 1.89
ATPAF1-201ENST00000329231 TBC1D21Q8IYX1 336 aa26.84■■□□□ 1.89
ATPAF1-201ENST00000329231 ULBP3Q9BZM4 244 aa26.84■■□□□ 1.89
ATPAF1-201ENST00000329231 POLG2Q9UHN1 485 aa26.84■■□□□ 1.89
ATPAF1-201ENST00000329231 GNPTGQ9UJJ9 305 aa26.84■■□□□ 1.89
ATPAF1-201ENST00000329231 POMT2Q9UKY4 750 aa26.84■■□□□ 1.89
ATPAF1-201ENST00000329231 GSAPA4D1B5 854 aa26.83■■□□□ 1.89
ATPAF1-201ENST00000329231 CTAGE9A4FU28 777 aa26.83■■□□□ 1.89
ATPAF1-201ENST00000329231 EIF4E1BA6NMX2 242 aaKnown RBP26.83■■□□□ 1.89
ATPAF1-201ENST00000329231 GOLGA8MH3BSY2 632 aa26.83■■□□□ 1.89
ATPAF1-201ENST00000329231 ZBTB11O95625 1053 aaPredicted RBP26.83■■□□□ 1.89
ATPAF1-201ENST00000329231 APOA4P06727 396 aa26.83■■□□□ 1.89
ATPAF1-201ENST00000329231 FGF5P12034 268 aa26.83■■□□□ 1.89
ATPAF1-201ENST00000329231 RPS3P23396 243 aaKnown RBP eCLIP26.83■■□□□ 1.89
ATPAF1-201ENST00000329231 ACY1Q03154 408 aa26.83■■□□□ 1.89
ATPAF1-201ENST00000329231 HSPA14Q0VDF9 509 aa26.83■■□□□ 1.89
ATPAF1-201ENST00000329231 PPP1R3BQ86XI6 285 aa26.83■■□□□ 1.89
ATPAF1-201ENST00000329231 OR5AR1Q8NGP9 310 aa26.83■■□□□ 1.89
ATPAF1-201ENST00000329231 SERPINB12Q96P63 405 aa26.83■■□□□ 1.89
ATPAF1-201ENST00000329231 PANX3Q96QZ0 392 aa26.83■■□□□ 1.89
ATPAF1-201ENST00000329231 P2RY12Q9H244 342 aa26.83■■□□□ 1.89
ATPAF1-201ENST00000329231 PCDHGA4Q9Y5G9 962 aa26.83■■□□□ 1.89
ATPAF1-201ENST00000329231 FAM237BA0A1B0GVD1 139 aa26.82■■□□□ 1.88
ATPAF1-201ENST00000329231 IQCF5A8MTL0 148 aa26.82■■□□□ 1.88
ATPAF1-201ENST00000329231 DLGAP3O95886 979 aa26.82■■□□□ 1.88
ATPAF1-201ENST00000329231 CSE1LP55060 971 aaKnown RBP26.82■■□□□ 1.88
ATPAF1-201ENST00000329231 TUBB3Q13509 450 aa26.82■■□□□ 1.88
ATPAF1-201ENST00000329231 MAP7Q14244 749 aa26.82■■□□□ 1.88
ATPAF1-201ENST00000329231 TMED2Q15363 201 aa26.82■■□□□ 1.88
ATPAF1-201ENST00000329231 LARP7Q4G0J3 582 aaKnown RBP eCLIP26.82■■□□□ 1.88
ATPAF1-201ENST00000329231 RNF187Q5TA31 235 aaPredicted RBP26.82■■□□□ 1.88
ATPAF1-201ENST00000329231 KIAA1614Q5VZ46 1190 aa26.82■■□□□ 1.88
ATPAF1-201ENST00000329231 BPHLQ86WA6 291 aaPredicted RBP26.82■■□□□ 1.88
ATPAF1-201ENST00000329231 PPIL6Q8IXY8 311 aa26.82■■□□□ 1.88
ATPAF1-201ENST00000329231 SLC22A15Q8IZD6 547 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms