RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 ANKRD33BA6NCL7 494 aa17.09■□□□□ 0.33
COL9A1-201ENST00000320755 KRT87PA6NCN2 255 aa17.09■□□□□ 0.33
COL9A1-201ENST00000320755 ANKRD28O15084 1053 aa17.09■□□□□ 0.33
COL9A1-201ENST00000320755 DCTN2Q13561 401 aaKnown RBP17.09■□□□□ 0.33
COL9A1-201ENST00000320755 TMEM26Q6ZUK4 368 aa17.09■□□□□ 0.33
COL9A1-201ENST00000320755 ANKRD46Q86W74 232 aa17.09■□□□□ 0.33
COL9A1-201ENST00000320755 RBFAQ8N0V3 343 aa17.09■□□□□ 0.33
COL9A1-201ENST00000320755 TIMMDC1Q9NPL8 285 aa17.09■□□□□ 0.33
COL9A1-201ENST00000320755 FAM8A1Q9UBU6 413 aa17.09■□□□□ 0.33
COL9A1-201ENST00000320755 ADGRE2Q9UHX3 823 aa17.09■□□□□ 0.33
COL9A1-201ENST00000320755 GAPDHSO14556 408 aaPredicted RBP17.09■□□□□ 0.33
COL9A1-201ENST00000320755 FZD6O60353 706 aa17.09■□□□□ 0.33
COL9A1-201ENST00000320755 DEAF1O75398 565 aaPredicted RBP17.09■□□□□ 0.33
COL9A1-201ENST00000320755 CDH1P12830 882 aa17.09■□□□□ 0.33
COL9A1-201ENST00000320755 ATN1P54259 1190 aaPredicted RBP17.09■□□□□ 0.33
COL9A1-201ENST00000320755 NAA20P61599 178 aa17.09■□□□□ 0.33
COL9A1-201ENST00000320755 LHX8Q68G74 356 aa17.09■□□□□ 0.33
COL9A1-201ENST00000320755 CERS6Q6ZMG9 384 aa17.09■□□□□ 0.33
COL9A1-201ENST00000320755 SLC22A15Q8IZD6 547 aa17.09■□□□□ 0.33
COL9A1-201ENST00000320755 DPP10Q8N608 796 aa17.09■□□□□ 0.33
COL9A1-201ENST00000320755 MRPL9Q9BYD2 267 aaKnown RBP17.09■□□□□ 0.33
COL9A1-201ENST00000320755 GNPTGQ9UJJ9 305 aa17.09■□□□□ 0.33
COL9A1-201ENST00000320755 PTBP2Q9UKA9 531 aaKnown RBP17.09■□□□□ 0.33
COL9A1-201ENST00000320755 FAF1Q9UNN5 650 aaPredicted RBP17.09■□□□□ 0.33
COL9A1-201ENST00000320755 B3GALT4O96024 378 aa17.08■□□□□ 0.33
COL9A1-201ENST00000320755 INHAP05111 366 aa17.08■□□□□ 0.33
COL9A1-201ENST00000320755 BPIP17213 487 aa17.08■□□□□ 0.33
COL9A1-201ENST00000320755 DGKAP23743 735 aa17.08■□□□□ 0.33
COL9A1-201ENST00000320755 AKT1P31749 480 aa17.08■□□□□ 0.33
COL9A1-201ENST00000320755 NEK2P51955 445 aa17.08■□□□□ 0.33
COL9A1-201ENST00000320755 RAB39AQ14964 217 aa17.08■□□□□ 0.33
COL9A1-201ENST00000320755 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.08■□□□□ 0.33
COL9A1-201ENST00000320755 RGL4Q8IZJ4 473 aa17.08■□□□□ 0.33
COL9A1-201ENST00000320755 PPP3R2Q96LZ3 170 aa17.08■□□□□ 0.33
COL9A1-201ENST00000320755 PRM3Q9NNZ6 103 aa17.08■□□□□ 0.33
COL9A1-201ENST00000320755 CD320Q9NPF0 282 aa17.08■□□□□ 0.33
COL9A1-201ENST00000320755 GALNT8Q9NY28 637 aa17.08■□□□□ 0.33
COL9A1-201ENST00000320755 IFT80Q9P2H3 777 aaPredicted RBP17.08■□□□□ 0.33
COL9A1-201ENST00000320755 TMCO1Q9UM00 188 aa17.08■□□□□ 0.33
COL9A1-201ENST00000320755 PCDHGA11Q9Y5H2 935 aa17.08■□□□□ 0.33
COL9A1-201ENST00000320755 CPQQ9Y646 472 aa17.08■□□□□ 0.33
COL9A1-201ENST00000320755 U3KQV3 271 aa17.08■□□□□ 0.33
COL9A1-201ENST00000320755 GLYATL1P3A0A0U1RQE8 302 aa17.08■□□□□ 0.32
COL9A1-201ENST00000320755 RGS14O43566 566 aa17.08■□□□□ 0.32
COL9A1-201ENST00000320755 PFDN1O60925 122 aa17.08■□□□□ 0.32
COL9A1-201ENST00000320755 ATE1O95260 518 aa17.08■□□□□ 0.32
COL9A1-201ENST00000320755 PSMA3P25788 255 aa17.08■□□□□ 0.32
COL9A1-201ENST00000320755 ARSFP54793 590 aa17.08■□□□□ 0.32
COL9A1-201ENST00000320755 ADARP55265 1226 aaKnown RBP17.08■□□□□ 0.32
COL9A1-201ENST00000320755 TPD52P55327 224 aaPredicted RBP17.08■□□□□ 0.32
COL9A1-201ENST00000320755 BFSP2Q13515 415 aa17.08■□□□□ 0.32
COL9A1-201ENST00000320755 VEPH1Q14D04 833 aa17.08■□□□□ 0.32
COL9A1-201ENST00000320755 INO80DQ53TQ3 878 aaPredicted RBP17.08■□□□□ 0.32
COL9A1-201ENST00000320755 DET1Q7L5Y6 550 aa17.08■□□□□ 0.32
COL9A1-201ENST00000320755 ZBTB2Q8N680 514 aa17.08■□□□□ 0.32
COL9A1-201ENST00000320755 PAPD5Q8NDF8 572 aaKnown RBP17.08■□□□□ 0.32
COL9A1-201ENST00000320755 BPIFB1Q8TDL5 484 aa17.08■□□□□ 0.32
COL9A1-201ENST00000320755 GFM2Q969S9 779 aaKnown RBP17.08■□□□□ 0.32
COL9A1-201ENST00000320755 FAM162AQ96A26 154 aa17.08■□□□□ 0.32
COL9A1-201ENST00000320755 PRKACGP22612 351 aa17.07■□□□□ 0.32
COL9A1-201ENST00000320755 NKG7Q16617 165 aa17.07■□□□□ 0.32
COL9A1-201ENST00000320755 SPATS1Q496A3 300 aa17.07■□□□□ 0.32
COL9A1-201ENST00000320755 RFLNAQ6ZTI6 216 aa17.07■□□□□ 0.32
COL9A1-201ENST00000320755 FAM81AQ8TBF8 368 aa17.07■□□□□ 0.32
COL9A1-201ENST00000320755 SGCDQ92629 289 aa17.07■□□□□ 0.32
COL9A1-201ENST00000320755 PYCR2Q96C36 320 aa17.07■□□□□ 0.32
COL9A1-201ENST00000320755 OR52E6Q96RD3 313 aa17.07■□□□□ 0.32
COL9A1-201ENST00000320755 CD244Q9BZW8 370 aa17.07■□□□□ 0.32
COL9A1-201ENST00000320755 RHBDL2Q9NX52 303 aa17.07■□□□□ 0.32
COL9A1-201ENST00000320755 LRATO95237 230 aa17.07■□□□□ 0.32
COL9A1-201ENST00000320755 RAP2AP10114 183 aa17.07■□□□□ 0.32
COL9A1-201ENST00000320755 CD9P21926 228 aa17.07■□□□□ 0.32
COL9A1-201ENST00000320755 SHMT2P34897 504 aa17.07■□□□□ 0.32
COL9A1-201ENST00000320755 GNPDA1P46926 289 aa17.07■□□□□ 0.32
COL9A1-201ENST00000320755 ENTPD1P49961 510 aa17.07■□□□□ 0.32
COL9A1-201ENST00000320755 SNX20Q7Z614 316 aa17.07■□□□□ 0.32
COL9A1-201ENST00000320755 RIMKLAQ8IXN7 391 aa17.07■□□□□ 0.32
COL9A1-201ENST00000320755 GTF2H4Q92759 462 aa17.07■□□□□ 0.32
COL9A1-201ENST00000320755 HSPBAP1Q96EW2 488 aa17.07■□□□□ 0.32
COL9A1-201ENST00000320755 PDLIM5Q96HC4 596 aaKnown RBP17.07■□□□□ 0.32
COL9A1-201ENST00000320755 ACTR8Q9H981 624 aa17.07■□□□□ 0.32
COL9A1-201ENST00000320755 SLC6A13Q9NSD5 602 aa17.07■□□□□ 0.32
COL9A1-201ENST00000320755 A0A1W2PPW3 197 aa17.07■□□□□ 0.32
COL9A1-201ENST00000320755 CST1P01037 141 aa17.07■□□□□ 0.32
COL9A1-201ENST00000320755 PGRP06401 933 aa17.07■□□□□ 0.32
COL9A1-201ENST00000320755 GGT1P19440 569 aa17.07■□□□□ 0.32
COL9A1-201ENST00000320755 POLR2IP36954 125 aaKnown RBP17.07■□□□□ 0.32
COL9A1-201ENST00000320755 CYP4F3Q08477 520 aa17.07■□□□□ 0.32
COL9A1-201ENST00000320755 CRY1Q16526 586 aa17.07■□□□□ 0.32
COL9A1-201ENST00000320755 SUSD1Q6UWL2 747 aa17.07■□□□□ 0.32
COL9A1-201ENST00000320755 GPR180Q86V85 440 aa17.07■□□□□ 0.32
COL9A1-201ENST00000320755 ZDHHC13Q8IUH4 622 aa17.07■□□□□ 0.32
COL9A1-201ENST00000320755 HJURPQ8NCD3 748 aaPredicted RBP17.07■□□□□ 0.32
COL9A1-201ENST00000320755 RHBDF1Q96CC6 855 aa17.07■□□□□ 0.32
COL9A1-201ENST00000320755 ASIC4Q96FT7 647 aa17.07■□□□□ 0.32
COL9A1-201ENST00000320755 LRTM1Q9HBL6 345 aa17.07■□□□□ 0.32
COL9A1-201ENST00000320755 INVSQ9Y283 1065 aa17.07■□□□□ 0.32
COL9A1-201ENST00000320755 UPK1AO00322 258 aa17.06■□□□□ 0.32
COL9A1-201ENST00000320755 PRKD3O94806 890 aa17.06■□□□□ 0.32
COL9A1-201ENST00000320755 NPPAP01160 153 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms