RNA–Protein interactions for RNA: ENST00000308271.13

USP48-201, Transcript of ubiquitin specific peptidase 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP48, Length 4,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-201ENST00000308271 ARMC1Q9NVT9 282 aa19.01■□□□□ 0.63
USP48-201ENST00000308271 SPACA6W5XKT8 324 aa19.01■□□□□ 0.63
USP48-201ENST00000308271 FAM163BP0C2L3 166 aa19.01■□□□□ 0.63
USP48-201ENST00000308271 NR2F1P10589 423 aa19.01■□□□□ 0.63
USP48-201ENST00000308271 MYCLP1P12525 358 aaPredicted RBP19.01■□□□□ 0.63
USP48-201ENST00000308271 HSD17B1P14061 328 aa19.01■□□□□ 0.63
USP48-201ENST00000308271 PTPN5P54829 565 aa19.01■□□□□ 0.63
USP48-201ENST00000308271 KCNAB2Q13303 367 aa19.01■□□□□ 0.63
USP48-201ENST00000308271 LCN8Q6JVE9 175 aa19.01■□□□□ 0.63
USP48-201ENST00000308271 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.01■□□□□ 0.63
USP48-201ENST00000308271 PIM3Q86V86 326 aa19.01■□□□□ 0.63
USP48-201ENST00000308271 CILP2Q8IUL8 1156 aa19.01■□□□□ 0.63
USP48-201ENST00000308271 TMEM199Q8N511 208 aa19.01■□□□□ 0.63
USP48-201ENST00000308271 ZNF614Q8N883 585 aa19.01■□□□□ 0.63
USP48-201ENST00000308271 GINS4Q9BRT9 223 aa19.01■□□□□ 0.63
USP48-201ENST00000308271 SLC22A4Q9H015 551 aa19.01■□□□□ 0.63
USP48-201ENST00000308271 SMURF2Q9HAU4 748 aa19.01■□□□□ 0.63
USP48-201ENST00000308271 FKBPLQ9UIM3 349 aa19.01■□□□□ 0.63
USP48-201ENST00000308271 ACOX3O15254 700 aa19■□□□□ 0.63
USP48-201ENST00000308271 PAPSS2O95340 614 aaPredicted RBP19■□□□□ 0.63
USP48-201ENST00000308271 C9P02748 559 aa19■□□□□ 0.63
USP48-201ENST00000308271 MMP3P08254 477 aa19■□□□□ 0.63
USP48-201ENST00000308271 MYL9P24844 172 aa19■□□□□ 0.63
USP48-201ENST00000308271 IFI44LQ53G44 452 aa19■□□□□ 0.63
USP48-201ENST00000308271 HFE2Q6ZVN8 426 aa19■□□□□ 0.63
USP48-201ENST00000308271 LAPTM4BQ86VI4 370 aa19■□□□□ 0.63
USP48-201ENST00000308271 KIAA1191Q96A73 305 aa19■□□□□ 0.63
USP48-201ENST00000308271 MYO19Q96H55 970 aa19■□□□□ 0.63
USP48-201ENST00000308271 CIPCQ9C0C6 399 aa19■□□□□ 0.63
USP48-201ENST00000308271 SOX17Q9H6I2 414 aaPredicted RBP19■□□□□ 0.63
USP48-201ENST00000308271 GIMAP2Q9UG22 337 aa19■□□□□ 0.63
USP48-201ENST00000308271 ADM5C9JUS6 153 aa19■□□□□ 0.63
USP48-201ENST00000308271 NOS1APO75052 506 aaPredicted RBP19■□□□□ 0.63
USP48-201ENST00000308271 FPR1P21462 350 aa19■□□□□ 0.63
USP48-201ENST00000308271 PMS2P3Q13401 168 aa19■□□□□ 0.63
USP48-201ENST00000308271 ARRDC4Q8NCT1 418 aa19■□□□□ 0.63
USP48-201ENST00000308271 OR13C4Q8NGS5 318 aa19■□□□□ 0.63
USP48-201ENST00000308271 FABP12A6NFH5 140 aa19■□□□□ 0.63
USP48-201ENST00000308271 INSIG1O15503 277 aa19■□□□□ 0.63
USP48-201ENST00000308271 ORC5O43913 435 aa19■□□□□ 0.63
USP48-201ENST00000308271 SNX4O95219 450 aa19■□□□□ 0.63
USP48-201ENST00000308271 RORCP51449 518 aa19■□□□□ 0.63
USP48-201ENST00000308271 IST1P53990 364 aa19■□□□□ 0.63
USP48-201ENST00000308271 CDKL1Q00532 357 aa19■□□□□ 0.63
USP48-201ENST00000308271 C16orf62Q7Z3J2 963 aa19■□□□□ 0.63
USP48-201ENST00000308271 ITIH5Q86UX2 942 aa19■□□□□ 0.63
USP48-201ENST00000308271 NAT16Q8N8M0 369 aa19■□□□□ 0.63
USP48-201ENST00000308271 MOCOSQ96EN8 888 aa19■□□□□ 0.63
USP48-201ENST00000308271 CDKN2AIPNLQ96HQ2 116 aa19■□□□□ 0.63
USP48-201ENST00000308271 ZNF641Q96N77 438 aaPredicted RBP19■□□□□ 0.63
USP48-201ENST00000308271 AARSD1Q9BTE6 412 aaKnown RBP19■□□□□ 0.63
USP48-201ENST00000308271 RAD18Q9NS91 495 aa19■□□□□ 0.63
USP48-201ENST00000308271 CMTM6Q9NX76 183 aa19■□□□□ 0.63
USP48-201ENST00000308271 CPA4Q9UI42 421 aa19■□□□□ 0.63
USP48-201ENST00000308271 ARL5AQ9Y689 179 aa19■□□□□ 0.63
USP48-201ENST00000308271 PPEF2O14830 753 aa19■□□□□ 0.63
USP48-201ENST00000308271 PSIP1O75475 530 aaKnown RBP19■□□□□ 0.63
USP48-201ENST00000308271 NTSP30990 170 aa19■□□□□ 0.63
USP48-201ENST00000308271 CPOXP36551 454 aa19■□□□□ 0.63
USP48-201ENST00000308271 CXCR3P49682 368 aa19■□□□□ 0.63
USP48-201ENST00000308271 VBP1P61758 197 aa19■□□□□ 0.63
USP48-201ENST00000308271 PRR23CQ6ZRP0 262 aa19■□□□□ 0.63
USP48-201ENST00000308271 OR8H1Q8NGG4 311 aa19■□□□□ 0.63
USP48-201ENST00000308271 KBTBD7Q8WVZ9 684 aa19■□□□□ 0.63
USP48-201ENST00000308271 GULP1Q9UBP9 304 aa19■□□□□ 0.63
USP48-201ENST00000308271 RIMS3Q9UJD0 308 aa19■□□□□ 0.63
USP48-201ENST00000308271 TACR2P21452 398 aa18.99■□□□□ 0.63
USP48-201ENST00000308271 ITPKAP23677 461 aa18.99■□□□□ 0.63
USP48-201ENST00000308271 CD97P48960 835 aa18.99■□□□□ 0.63
USP48-201ENST00000308271 TARBP2Q15633 366 aaKnown RBP18.99■□□□□ 0.63
USP48-201ENST00000308271 MSANTD2Q6P1R3 559 aa18.99■□□□□ 0.63
USP48-201ENST00000308271 KDM1BQ8NB78 822 aa18.99■□□□□ 0.63
USP48-201ENST00000308271 SLITRK2Q9H156 845 aa18.99■□□□□ 0.63
USP48-201ENST00000308271 BRD9Q9H8M2 597 aa18.99■□□□□ 0.63
USP48-201ENST00000308271 PCDHGA7Q9Y5G6 932 aa18.99■□□□□ 0.63
USP48-201ENST00000308271 CHD4Q14839 1912 aa18.99■□□□□ 0.63
USP48-201ENST00000308271 GRID2O43424 1007 aa18.99■□□□□ 0.63
USP48-201ENST00000308271 GUCY1B2O75343 617 aa18.99■□□□□ 0.63
USP48-201ENST00000308271 CREG1O75629 220 aa18.99■□□□□ 0.63
USP48-201ENST00000308271 CCNB2O95067 398 aa18.99■□□□□ 0.63
USP48-201ENST00000308271 CCNDBP1O95273 360 aa18.99■□□□□ 0.63
USP48-201ENST00000308271 DIO3P55073 304 aa18.99■□□□□ 0.63
USP48-201ENST00000308271 GRIK2Q13002 908 aa18.99■□□□□ 0.63
USP48-201ENST00000308271 ARHGAP15Q53QZ3 475 aa18.99■□□□□ 0.63
USP48-201ENST00000308271 FBXL19Q6PCT2 694 aa18.99■□□□□ 0.63
USP48-201ENST00000308271 BHLHB9Q6PI77 547 aa18.99■□□□□ 0.63
USP48-201ENST00000308271 CXXC5Q7LFL8 322 aaKnown RBP18.99■□□□□ 0.63
USP48-201ENST00000308271 SCML4Q8N228 414 aa18.99■□□□□ 0.63
USP48-201ENST00000308271 SLC29A1Q99808 456 aa18.99■□□□□ 0.63
USP48-201ENST00000308271 GLYATL1P3A0A0U1RQE8 302 aa18.99■□□□□ 0.63
USP48-201ENST00000308271 AURKAO14965 403 aa18.99■□□□□ 0.63
USP48-201ENST00000308271 PGRMC2O15173 223 aa18.99■□□□□ 0.63
USP48-201ENST00000308271 TP73O15350 636 aa18.99■□□□□ 0.63
USP48-201ENST00000308271 CXCR2P25025 360 aa18.99■□□□□ 0.63
USP48-201ENST00000308271 GMPRP36959 345 aa18.99■□□□□ 0.63
USP48-201ENST00000308271 GRIA2P42262 883 aa18.99■□□□□ 0.63
USP48-201ENST00000308271 CLCNKBP51801 687 aa18.99■□□□□ 0.63
USP48-201ENST00000308271 WNT7BP56706 349 aa18.99■□□□□ 0.63
USP48-201ENST00000308271 EMX2Q04743 252 aa18.99■□□□□ 0.63
USP48-201ENST00000308271 CDK15Q96Q40 435 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms