RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 PCDHGA12O60330 932 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 PSIP1O75475 530 aaKnown RBP9.26□□□□□ -0.93
RFX3-201ENST00000302303 KLHL2O95198 593 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 MT-ND3P03897 115 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 MPOP05164 745 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 APOA4P06727 396 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 MPC1LP0DKB6 136 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 F3P13726 295 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 MTHFD2P13995 350 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 CTSEP14091 401 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 KRT15P19012 456 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 IDSP22304 550 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 SLC19A1P41440 591 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 IL2P60568 153 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 ILF3Q12906 894 aaKnown RBP eCLIP9.26□□□□□ -0.93
RFX3-201ENST00000302303 ABRQ12979 859 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 CSHL1Q14406 222 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 OR4D1Q15615 310 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 RPE65Q16518 533 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 CSRP2Q16527 193 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 PHKG1Q16816 387 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 DEFB133Q30KQ1 61 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.26□□□□□ -0.93
RFX3-201ENST00000302303 AGBL2Q5U5Z8 902 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 TAF8Q7Z7C8 310 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 PDZD3Q86UT5 571 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 SRRM1Q8IYB3 904 aaKnown RBP9.26□□□□□ -0.93
RFX3-201ENST00000302303 C4orf33Q8N1A6 199 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 SDR16C5Q8N3Y7 309 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 FSTL5Q8N475 847 aaPredicted RBP9.26□□□□□ -0.93
RFX3-201ENST00000302303 MINDY1Q8N5J2 469 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 PHC3Q8NDX5 983 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 GPR156Q8NFN8 814 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 TMEM159Q96B96 161 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 LINGO1Q96FE5 620 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 TSPAN17Q96FV3 270 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 TSSK1BQ9BXA7 367 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 NUSAP1Q9BXS6 441 aaKnown RBP9.26□□□□□ -0.93
RFX3-201ENST00000302303 GSDMCQ9BYG8 508 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 TWSG1Q9GZX9 223 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 VPS11Q9H270 941 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 SYTL2Q9HCH5 934 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 PCMTD2Q9NV79 361 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 MKS1Q9NXB0 559 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 NOVA2Q9UNW9 492 aaKnown RBP9.26□□□□□ -0.93
RFX3-201ENST00000302303 CFAP20Q9Y6A4 193 aaKnown RBP9.26□□□□□ -0.93
RFX3-201ENST00000302303 U3KQA8 63 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 ARHGEF17Q96PE2 2063 aaPredicted RBP9.26□□□□□ -0.93
RFX3-201ENST00000302303 DMXL1Q9Y485 3027 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 TRBV23OR9-2A0A075B6M9 112 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 A0A087X1B8 175 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 F8W8V4 182 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 DFNA5O60443 496 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 SNX2O60749 519 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 C1orf105O95561 183 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 SYPP08247 313 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 LTA4HP09960 611 aaKnown RBP9.26□□□□□ -0.93
RFX3-201ENST00000302303 MYZAPP0CAP1 466 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 COL6A2P12110 1019 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 ENO3P13929 434 aaPredicted RBP9.26□□□□□ -0.93
RFX3-201ENST00000302303 CRHR1P34998 444 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 SLC12A2P55011 1212 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 UBE2IP63279 158 aaKnown RBP9.26□□□□□ -0.93
RFX3-201ENST00000302303 PLOD1Q02809 727 aaPredicted RBP9.26□□□□□ -0.93
RFX3-201ENST00000302303 ELOCQ15369 112 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 SEPT7Q16181 437 aaKnown RBP9.26□□□□□ -0.93
RFX3-201ENST00000302303 TECRLQ5HYJ1 363 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 DUS1LQ6P1R4 473 aaKnown RBP9.26□□□□□ -0.93
RFX3-201ENST00000302303 C16orf46Q6P387 395 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 LVRNQ6Q4G3 990 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 IL27RAQ6UWB1 636 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 RAPH1Q70E73 1250 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 TAOK1Q7L7X3 1001 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 CROCCP2Q86T23 111 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 SFRP1Q8N474 314 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 NKAPQ8N5F7 415 aaKnown RBP9.26□□□□□ -0.93
RFX3-201ENST00000302303 FAM46DQ8NEK8 389 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 SLC37A2Q8TED4 501 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 DENND1AQ8TEH3 1009 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 TFGQ92734 400 aaPredicted RBP9.26□□□□□ -0.93
RFX3-201ENST00000302303 KIAA1191Q96A73 305 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 ATOH8Q96SQ7 321 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 OSGEPL1Q9H4B0 414 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 TSR3Q9UJK0 312 aaKnown RBP9.26□□□□□ -0.93
RFX3-201ENST00000302303 GMEB2Q9UKD1 530 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 PDE10AQ9Y233 779 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 BTBD3Q9Y2F9 522 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 ACTL7BQ9Y614 415 aa9.26□□□□□ -0.93
RFX3-201ENST00000302303 ARHGEF33A8MVX0 844 aa9.25□□□□□ -0.93
RFX3-201ENST00000302303 H3BQF6 201 aa9.25□□□□□ -0.93
RFX3-201ENST00000302303 CASC3O15234 703 aaKnown RBP9.25□□□□□ -0.93
RFX3-201ENST00000302303 PPM1DO15297 605 aa9.25□□□□□ -0.93
RFX3-201ENST00000302303 GDF9O60383 454 aa9.25□□□□□ -0.93
RFX3-201ENST00000302303 LRP3O75074 770 aa9.25□□□□□ -0.93
RFX3-201ENST00000302303 SPAG7O75391 227 aa9.25□□□□□ -0.93
RFX3-201ENST00000302303 CER1O95813 267 aa9.25□□□□□ -0.93
RFX3-201ENST00000302303 ZNF883P0CG24 379 aa9.25□□□□□ -0.93
RFX3-201ENST00000302303 MYF5P13349 255 aa9.25□□□□□ -0.93
RFX3-201ENST00000302303 CD59P13987 128 aa9.25□□□□□ -0.93
RFX3-201ENST00000302303 VCLP18206 1134 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms