RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 CAMK1Q14012 370 aa13.72□□□□□ -0.21
NXF1-201ENST00000294172 TLR1Q15399 786 aa13.72□□□□□ -0.21
NXF1-201ENST00000294172 PLA2G4EQ3MJ16 856 aa13.72□□□□□ -0.21
NXF1-201ENST00000294172 ZNF648Q5T619 568 aaPredicted RBP13.72□□□□□ -0.21
NXF1-201ENST00000294172 AMIGO2Q86SJ2 522 aa13.72□□□□□ -0.21
NXF1-201ENST00000294172 VRK3Q8IV63 474 aa13.72□□□□□ -0.21
NXF1-201ENST00000294172 TMEM125Q96AQ2 219 aa13.72□□□□□ -0.21
NXF1-201ENST00000294172 MRGPRX3Q96LB0 322 aa13.72□□□□□ -0.21
NXF1-201ENST00000294172 EFHD1Q9BUP0 239 aa13.72□□□□□ -0.21
NXF1-201ENST00000294172 TRIM54Q9BYV2 358 aa13.72□□□□□ -0.21
NXF1-201ENST00000294172 PIF1Q9H611 641 aa13.72□□□□□ -0.21
NXF1-201ENST00000294172 HEBP1Q9NRV9 189 aa13.72□□□□□ -0.21
NXF1-201ENST00000294172 INTS7Q9NVH2 962 aaKnown RBP13.72□□□□□ -0.21
NXF1-201ENST00000294172 ZNF490Q9ULM2 529 aaPredicted RBP13.72□□□□□ -0.21
NXF1-201ENST00000294172 CNOT6Q9ULM6 557 aaKnown RBP13.72□□□□□ -0.21
NXF1-201ENST00000294172 PCDHA9Q9Y5H5 950 aa13.72□□□□□ -0.21
NXF1-201ENST00000294172 LINC01553A4QN01 128 aa13.71□□□□□ -0.21
NXF1-201ENST00000294172 KRT87PA6NCN2 255 aa13.71□□□□□ -0.21
NXF1-201ENST00000294172 RGS14O43566 566 aa13.71□□□□□ -0.21
NXF1-201ENST00000294172 TIPRLO75663 272 aa13.71□□□□□ -0.21
NXF1-201ENST00000294172 CTSLP07711 333 aa13.71□□□□□ -0.21
NXF1-201ENST00000294172 HSD17B1P14061 328 aa13.71□□□□□ -0.21
NXF1-201ENST00000294172 MYOGP15173 224 aa13.71□□□□□ -0.21
NXF1-201ENST00000294172 DGKQP52824 942 aa13.71□□□□□ -0.21
NXF1-201ENST00000294172 CPSF6Q16630 551 aaKnown RBP eCLIP13.71□□□□□ -0.21
NXF1-201ENST00000294172 NRF1Q16656 503 aa13.71□□□□□ -0.21
NXF1-201ENST00000294172 IMPG1Q17R60 797 aa13.71□□□□□ -0.21
NXF1-201ENST00000294172 TCEAL5Q5H9L2 206 aa13.71□□□□□ -0.21
NXF1-201ENST00000294172 ZFAND4Q86XD8 727 aa13.71□□□□□ -0.21
NXF1-201ENST00000294172 TICAM1Q8IUC6 712 aa13.71□□□□□ -0.21
NXF1-201ENST00000294172 BEND7Q8N7W2 519 aaPredicted RBP13.71□□□□□ -0.21
NXF1-201ENST00000294172 ITFG1Q8TB96 612 aa13.71□□□□□ -0.21
NXF1-201ENST00000294172 FAM110BQ8TC76 370 aa13.71□□□□□ -0.21
NXF1-201ENST00000294172 UBTD2Q8WUN7 234 aa13.71□□□□□ -0.21
NXF1-201ENST00000294172 PPP3R2Q96LZ3 170 aa13.71□□□□□ -0.21
NXF1-201ENST00000294172 LRRC3BQ96PB8 259 aa13.71□□□□□ -0.21
NXF1-201ENST00000294172 TRIM15Q9C019 465 aa13.71□□□□□ -0.21
NXF1-201ENST00000294172 ALG2Q9H553 416 aa13.71□□□□□ -0.21
NXF1-201ENST00000294172 ACTR8Q9H981 624 aa13.71□□□□□ -0.21
NXF1-201ENST00000294172 ZFP14Q9HCL3 533 aa13.71□□□□□ -0.21
NXF1-201ENST00000294172 IL36AQ9UHA7 158 aa13.71□□□□□ -0.21
NXF1-201ENST00000294172 SLC8A2Q9UPR5 921 aa13.71□□□□□ -0.21
NXF1-201ENST00000294172 NOTCH4Q99466 2003 aa13.71□□□□□ -0.22
NXF1-201ENST00000294172 PABPN1LA6NDY0 278 aaKnown RBP13.7□□□□□ -0.22
NXF1-201ENST00000294172 OR2AG2A6NM03 316 aa13.7□□□□□ -0.22
NXF1-201ENST00000294172 AKAP10O43572 662 aa13.7□□□□□ -0.22
NXF1-201ENST00000294172 HIST1H2AGP0C0S8 130 aaPredicted RBP13.7□□□□□ -0.22
NXF1-201ENST00000294172 EBLN1P0CF75 366 aa13.7□□□□□ -0.22
NXF1-201ENST00000294172 TIMP2P16035 220 aa13.7□□□□□ -0.22
NXF1-201ENST00000294172 HIST1H2ADP20671 130 aa13.7□□□□□ -0.22
NXF1-201ENST00000294172 LIPEQ05469 1076 aa13.7□□□□□ -0.22
NXF1-201ENST00000294172 BNIP2Q12982 314 aa13.7□□□□□ -0.22
NXF1-201ENST00000294172 DHCR24Q15392 516 aa13.7□□□□□ -0.22
NXF1-201ENST00000294172 MTX3Q5HYI7 312 aa13.7□□□□□ -0.22
NXF1-201ENST00000294172 C6orf52Q5T4I8 152 aa13.7□□□□□ -0.22
NXF1-201ENST00000294172 ISLR2Q6UXK2 745 aa13.7□□□□□ -0.22
NXF1-201ENST00000294172 KIAA2013Q8IYS2 634 aa13.7□□□□□ -0.22
NXF1-201ENST00000294172 LEMD2Q8NC56 503 aa13.7□□□□□ -0.22
NXF1-201ENST00000294172 ST13P5Q8NFI4 369 aaPredicted RBP13.7□□□□□ -0.22
NXF1-201ENST00000294172 PYCR2Q96C36 320 aa13.7□□□□□ -0.22
NXF1-201ENST00000294172 HIST1H2AHQ96KK5 128 aa13.7□□□□□ -0.22
NXF1-201ENST00000294172 TSC22D3Q99576 134 aa13.7□□□□□ -0.22
NXF1-201ENST00000294172 HIST1H2AJQ99878 128 aa13.7□□□□□ -0.22
NXF1-201ENST00000294172 KCTD14Q9BQ13 255 aaPredicted RBP13.7□□□□□ -0.22
NXF1-201ENST00000294172 H2AFJQ9BTM1 129 aa13.7□□□□□ -0.22
NXF1-201ENST00000294172 RIOK2Q9BVS4 552 aaKnown RBP13.7□□□□□ -0.22
NXF1-201ENST00000294172 Q9H521 79 aa13.7□□□□□ -0.22
NXF1-201ENST00000294172 ACTL8Q9H568 366 aa13.7□□□□□ -0.22
NXF1-201ENST00000294172 PIDD1Q9HB75 910 aa13.7□□□□□ -0.22
NXF1-201ENST00000294172 PARVBQ9HBI1 364 aa13.7□□□□□ -0.22
NXF1-201ENST00000294172 PDP2Q9P2J9 529 aa13.7□□□□□ -0.22
NXF1-201ENST00000294172 CCL27Q9Y4X3 112 aa13.7□□□□□ -0.22
NXF1-201ENST00000294172 UPK3BL1B0FP48 263 aa13.7□□□□□ -0.22
NXF1-201ENST00000294172 UPK3BL2E5RIL1 263 aa13.7□□□□□ -0.22
NXF1-201ENST00000294172 RSL1D1O76021 490 aaKnown RBP13.7□□□□□ -0.22
NXF1-201ENST00000294172 ARHGEF15O94989 841 aa13.7□□□□□ -0.22
NXF1-201ENST00000294172 HNRNPA1P09651 372 aaKnown RBP eCLIP13.7□□□□□ -0.22
NXF1-201ENST00000294172 ZNF30P17039 623 aa13.7□□□□□ -0.22
NXF1-201ENST00000294172 SYN1P17600 705 aa13.7□□□□□ -0.22
NXF1-201ENST00000294172 MSH3P20585 1137 aa13.7□□□□□ -0.22
NXF1-201ENST00000294172 HOXA9P31269 272 aa13.7□□□□□ -0.22
NXF1-201ENST00000294172 DGKGP49619 791 aa13.7□□□□□ -0.22
NXF1-201ENST00000294172 GSK3BP49841 420 aa13.7□□□□□ -0.22
NXF1-201ENST00000294172 PTGR1Q14914 329 aa13.7□□□□□ -0.22
NXF1-201ENST00000294172 SLC44A4Q53GD3 710 aa13.7□□□□□ -0.22
NXF1-201ENST00000294172 NANOGP8Q6NSW7 305 aa13.7□□□□□ -0.22
NXF1-201ENST00000294172 PSRC1Q6PGN9 363 aaPredicted RBP13.7□□□□□ -0.22
NXF1-201ENST00000294172 ELMO1Q92556 727 aa13.7□□□□□ -0.22
NXF1-201ENST00000294172 ZUFSPQ96AP4 578 aa13.7□□□□□ -0.22
NXF1-201ENST00000294172 CNBD2Q96M20 576 aa13.7□□□□□ -0.22
NXF1-201ENST00000294172 NTMT1Q9BV86 223 aa13.7□□□□□ -0.22
NXF1-201ENST00000294172 NANOGQ9H9S0 305 aa13.7□□□□□ -0.22
NXF1-201ENST00000294172 DUS2Q9NX74 493 aaKnown RBP13.7□□□□□ -0.22
NXF1-201ENST00000294172 AP4B1Q9Y6B7 739 aa13.7□□□□□ -0.22
NXF1-201ENST00000294172 CFAP99D6REC4 459 aa13.69□□□□□ -0.22
NXF1-201ENST00000294172 MANBAO00462 879 aa13.69□□□□□ -0.22
NXF1-201ENST00000294172 SLC9A3R1O14745 358 aaPredicted RBP13.69□□□□□ -0.22
NXF1-201ENST00000294172 ARPC2O15144 300 aa13.69□□□□□ -0.22
NXF1-201ENST00000294172 TPST1O60507 370 aa13.69□□□□□ -0.22
NXF1-201ENST00000294172 SEC22BO75396 215 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms